RNA–Protein interactions for RNA: ENST00000535237.2

GOPC-203, Transcript of golgi associated PDZ and coiled-coil motif containing, humanhuman

TSL 1 (best) BASIC

Gene GOPC, Length 4,460 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GOPC-203ENST00000535237 KRTAP21-3Q3LHN1 58 aa8.98□□□□□ -0.97
GOPC-203ENST00000535237 HRNRQ86YZ3 2850 aaPredicted RBP8.98□□□□□ -0.97
GOPC-203ENST00000535237 LCE6AA0A183 80 aa8.98□□□□□ -0.97
GOPC-203ENST00000535237 DMAC1Q96GE9 116 aa8.98□□□□□ -0.97
GOPC-203ENST00000535237 PLAC8Q9NZF1 115 aa8.95□□□□□ -0.98
GOPC-203ENST00000535237 A6NN06 94 aa8.95□□□□□ -0.98
GOPC-203ENST00000535237 SMG1Q96Q15 3661 aaKnown RBP8.9□□□□□ -0.98
GOPC-203ENST00000535237 A0A087X002 238 aa8.9□□□□□ -0.98
GOPC-203ENST00000535237 NOTCH2NLQ7Z3S9 236 aa8.9□□□□□ -0.98
GOPC-203ENST00000535237 LUZP6Q538Z0 58 aa8.88□□□□□ -0.99
GOPC-203ENST00000535237 PANO1I0J062 215 aa8.88□□□□□ -0.99
GOPC-203ENST00000535237 SPENQ96T58 3664 aaKnown RBP8.85□□□□□ -0.99
GOPC-203ENST00000535237 ADM2Q7Z4H4 148 aa8.85□□□□□ -0.99
GOPC-203ENST00000535237 SPATA8Q6RVD6 105 aa8.84□□□□□ -0.99
GOPC-203ENST00000535237 ASB16-AS1Q495Z4 193 aa8.84□□□□□ -0.99
GOPC-203ENST00000535237 KRTAP7-1Q8IUC3 87 aa8.83□□□□□ -1
GOPC-203ENST00000535237 MXRA5Q9NR99 2828 aa8.82□□□□□ -1
GOPC-203ENST00000535237 LINC00483Q53H64 154 aa8.82□□□□□ -1
GOPC-203ENST00000535237 KRTAP11-1Q8IUC1 163 aa8.81□□□□□ -1
GOPC-203ENST00000535237 COX6B2Q6YFQ2 88 aa8.79□□□□□ -1
GOPC-203ENST00000535237 CELSR1Q9NYQ6 3014 aa8.79□□□□□ -1
GOPC-203ENST00000535237 RPL37P61927 97 aaKnown RBP8.77□□□□□ -1.01
GOPC-203ENST00000535237 BSNQ9UPA5 3926 aa8.75□□□□□ -1.01
GOPC-203ENST00000535237 ROMO1P60602 79 aa8.74□□□□□ -1.01
GOPC-203ENST00000535237 H1FX-AS1Q4G0G2 97 aa8.74□□□□□ -1.01
GOPC-203ENST00000535237 CSMD1Q96PZ7 3565 aa8.71□□□□□ -1.01
GOPC-203ENST00000535237 CAMK2N1Q7Z7J9 78 aa8.68□□□□□ -1.02
GOPC-203ENST00000535237 Q6ZSA8 131 aa8.66□□□□□ -1.02
GOPC-203ENST00000535237 S4R3F8 94 aa8.66□□□□□ -1.02
GOPC-203ENST00000535237 TENM3Q9P273 2699 aa8.65□□□□□ -1.02
GOPC-203ENST00000535237 CUBNO60494 3623 aa8.64□□□□□ -1.03
GOPC-203ENST00000535237 KRTAP25-1Q3LHN0 102 aa8.62□□□□□ -1.03
GOPC-203ENST00000535237 SVEP1Q4LDE5 3571 aa8.61□□□□□ -1.03
GOPC-203ENST00000535237 PKD1L1Q8TDX9 2849 aa8.61□□□□□ -1.03
GOPC-203ENST00000535237 KRTAP10-2P60368 255 aa8.61□□□□□ -1.03
GOPC-203ENST00000535237 KRTAP10-1P60331 282 aa8.59□□□□□ -1.03
GOPC-203ENST00000535237 A0A0A0MQY5 61 aa8.56□□□□□ -1.04
GOPC-203ENST00000535237 TENM1Q9UKZ4 2725 aa8.56□□□□□ -1.04
GOPC-203ENST00000535237 R4GN34 69 aa8.56□□□□□ -1.04
GOPC-203ENST00000535237 KRTAP13-1Q8IUC0 172 aa8.55□□□□□ -1.04
GOPC-203ENST00000535237 TENM2Q9NT68 2774 aa8.54□□□□□ -1.04
GOPC-203ENST00000535237 Q5VSD8 79 aa8.54□□□□□ -1.04
GOPC-203ENST00000535237 Q6ZRN7 208 aaPredicted RBP8.48□□□□□ -1.05
GOPC-203ENST00000535237 PDZD2O15018 2839 aa8.46□□□□□ -1.05
GOPC-203ENST00000535237 KRTAP16-1A8MUX0 517 aa8.44□□□□□ -1.06
GOPC-203ENST00000535237 NDUFAF8A1L188 74 aa8.43□□□□□ -1.06
GOPC-203ENST00000535237 M0QZ58 72 aa8.42□□□□□ -1.06
GOPC-203ENST00000535237 KRTAP13-2Q52LG2 175 aa8.42□□□□□ -1.06
GOPC-203ENST00000535237 CSMD2Q7Z408 3487 aa8.38□□□□□ -1.07
GOPC-203ENST00000535237 OTOGQ6ZRI0 2925 aa8.36□□□□□ -1.07
GOPC-203ENST00000535237 A8MUU9 505 aa8.36□□□□□ -1.07
GOPC-203ENST00000535237 VWFP04275 2813 aa8.35□□□□□ -1.07
GOPC-203ENST00000535237 FBN1P35555 2871 aaKnown RBP8.33□□□□□ -1.08
GOPC-203ENST00000535237 TGP01266 2768 aa8.33□□□□□ -1.08
GOPC-203ENST00000535237 ZFHX3Q15911 3703 aa8.31□□□□□ -1.08
GOPC-203ENST00000535237 VPS13CQ709C8 3753 aa8.27□□□□□ -1.09
GOPC-203ENST00000535237 M0R2T5 61 aa8.25□□□□□ -1.09
GOPC-203ENST00000535237 RPS29P62273 56 aaKnown RBP8.22□□□□□ -1.09
GOPC-203ENST00000535237 NBPF19A0A087WUL8 3843 aa8.19□□□□□ -1.1
GOPC-203ENST00000535237 H0YAA0 97 aa8.18□□□□□ -1.1
GOPC-203ENST00000535237 SRRM2Q9UQ35 2752 aaKnown RBP8.18□□□□□ -1.1
GOPC-203ENST00000535237 SEC61BP60468 96 aaKnown RBP8.17□□□□□ -1.1
GOPC-203ENST00000535237 C10orf95Q9H7T3 257 aa8.15□□□□□ -1.1
GOPC-203ENST00000535237 C20orf166-AS1Q96NR2 134 aa8.09□□□□□ -1.11
GOPC-203ENST00000535237 PLAC4Q8WY50 150 aa8.06□□□□□ -1.12
GOPC-203ENST00000535237 KRTAP1-4P0C5Y4 121 aa8.01□□□□□ -1.13
GOPC-203ENST00000535237 ZNF469Q96JG9 3925 aaPredicted RBP8□□□□□ -1.13
GOPC-203ENST00000535237 KRTAP13-3Q3SY46 172 aa7.97□□□□□ -1.13
GOPC-203ENST00000535237 ANK3Q12955 4377 aaKnown RBP7.91□□□□□ -1.14
GOPC-203ENST00000535237 P0C880 135 aa7.89□□□□□ -1.15
GOPC-203ENST00000535237 FBN3Q75N90 2809 aa7.87□□□□□ -1.15
GOPC-203ENST00000535237 TNP1P09430 55 aa7.8□□□□□ -1.16
GOPC-203ENST00000535237 TRRAPQ9Y4A5 3859 aa7.77□□□□□ -1.17
GOPC-203ENST00000535237 KRTAP10-8P60410 259 aa7.76□□□□□ -1.17
GOPC-203ENST00000535237 XP32Q5T750 250 aa7.76□□□□□ -1.17
GOPC-203ENST00000535237 AKAP9Q99996 3911 aa7.74□□□□□ -1.17
GOPC-203ENST00000535237 PP632Q6XCG6 107 aa7.72□□□□□ -1.17
GOPC-203ENST00000535237 MEGF8Q7Z7M0 2845 aa7.69□□□□□ -1.18
GOPC-203ENST00000535237 COL7A1Q02388 2944 aa7.67□□□□□ -1.18
GOPC-203ENST00000535237 TPRXLQ17RH7 258 aa7.6□□□□□ -1.19
GOPC-203ENST00000535237 A0A1B0GVY2 172 aa7.59□□□□□ -1.19
GOPC-203ENST00000535237 KRTAP12-2P59991 146 aa7.57□□□□□ -1.2
GOPC-203ENST00000535237 KRTAP3-1Q9BYR8 98 aa7.54□□□□□ -1.2
GOPC-203ENST00000535237 KRTAP12-1P59990 96 aa7.45□□□□□ -1.22
GOPC-203ENST00000535237 KRTAP13-4Q3LI77 160 aa7.4□□□□□ -1.23
GOPC-203ENST00000535237 CSMD3Q7Z407 3707 aa7.37□□□□□ -1.23
GOPC-203ENST00000535237 KRTAP10-6P60371 365 aaPredicted RBP7.36□□□□□ -1.23
GOPC-203ENST00000535237 DNHD1Q96M86 4753 aa7.23□□□□□ -1.25
GOPC-203ENST00000535237 HUWE1Q7Z6Z7 4374 aaKnown RBP7.2□□□□□ -1.26
GOPC-203ENST00000535237 KRTAP15-1Q3LI76 137 aa7.17□□□□□ -1.26
GOPC-203ENST00000535237 KRTAP10-10P60014 251 aa7.15□□□□□ -1.26
GOPC-203ENST00000535237 ANK2Q01484 3957 aa7.1□□□□□ -1.27
GOPC-203ENST00000535237 KRTAP3-2Q9BYR7 98 aa7.1□□□□□ -1.27
GOPC-203ENST00000535237 KRTAP4-5Q9BYR2 181 aa7.08□□□□□ -1.28
GOPC-203ENST00000535237 KRTAP3-3Q9BYR6 98 aa7.06□□□□□ -1.28
GOPC-203ENST00000535237 DNAH9Q9NYC9 4486 aa7.03□□□□□ -1.28
GOPC-203ENST00000535237 CMYA5Q8N3K9 4069 aa6.99□□□□□ -1.29
GOPC-203ENST00000535237 DNAH3Q8TD57 4116 aa6.94□□□□□ -1.3
GOPC-203ENST00000535237 PRO2289Q9P1D8 64 aa6.93□□□□□ -1.3
GOPC-203ENST00000535237 PLECQ15149 4684 aaKnown RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms