RNA–Protein interactions for RNA: ENST00000535076.5

SNHG1-201, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-201ENST00000535076 TYMSOSQ8TAI1 123 aa2.67□□□□□ -1.98
SNHG1-201ENST00000535076 FLNBO75369 2602 aaKnown RBP2.67□□□□□ -1.98
SNHG1-201ENST00000535076 WDFY3Q8IZQ1 3526 aa2.67□□□□□ -1.98
SNHG1-201ENST00000535076 TENM2Q9NT68 2774 aa2.66□□□□□ -1.98
SNHG1-201ENST00000535076 KRTAP5-1Q6L8H4 278 aa2.66□□□□□ -1.98
SNHG1-201ENST00000535076 SETXQ7Z333 2677 aaKnown RBP2.66□□□□□ -1.98
SNHG1-201ENST00000535076 UTP20O75691 2785 aaKnown RBP2.66□□□□□ -1.98
SNHG1-201ENST00000535076 SPTAN1Q13813 2472 aaKnown RBP2.65□□□□□ -1.98
SNHG1-201ENST00000535076 LOC400499M0QZD8 3231 aa2.65□□□□□ -1.98
SNHG1-201ENST00000535076 TENM4Q6N022 2769 aa2.65□□□□□ -1.99
SNHG1-201ENST00000535076 ZNF462Q96JM2 2506 aa2.65□□□□□ -1.99
SNHG1-201ENST00000535076 LRRK2Q5S007 2527 aa2.65□□□□□ -1.99
SNHG1-201ENST00000535076 USP9XQ93008 2570 aaPredicted RBP2.64□□□□□ -1.99
SNHG1-201ENST00000535076 BOD1L1Q8NFC6 3051 aa2.64□□□□□ -1.99
SNHG1-201ENST00000535076 C2CD3Q4AC94 2353 aa2.64□□□□□ -1.99
SNHG1-201ENST00000535076 BAHCC1Q9P281 2608 aa2.63□□□□□ -1.99
SNHG1-201ENST00000535076 SMG1Q96Q15 3661 aaKnown RBP2.63□□□□□ -1.99
SNHG1-201ENST00000535076 SPINK1P00995 79 aa2.62□□□□□ -1.99
SNHG1-201ENST00000535076 LINC01556Q5JQF7 62 aa2.62□□□□□ -1.99
SNHG1-201ENST00000535076 KRTAP13-1Q8IUC0 172 aa2.62□□□□□ -1.99
SNHG1-201ENST00000535076 DEFB124Q8NES8 71 aa2.62□□□□□ -1.99
SNHG1-201ENST00000535076 USP9YO00507 2555 aaPredicted RBP2.62□□□□□ -1.99
SNHG1-201ENST00000535076 PTPN13Q12923 2485 aa2.62□□□□□ -1.99
SNHG1-201ENST00000535076 ITPR2Q14571 2701 aa2.62□□□□□ -1.99
SNHG1-201ENST00000535076 UBR5O95071 2799 aaPredicted RBP2.61□□□□□ -1.99
SNHG1-201ENST00000535076 MAP1AP78559 2803 aaPredicted RBP2.61□□□□□ -1.99
SNHG1-201ENST00000535076 NAV2Q8IVL1 2488 aa2.61□□□□□ -1.99
SNHG1-201ENST00000535076 A0A096LPF7 62 aa2.61□□□□□ -1.99
SNHG1-201ENST00000535076 PP632Q6XCG6 107 aa2.61□□□□□ -1.99
SNHG1-201ENST00000535076 S4R3F8 94 aa2.61□□□□□ -1.99
SNHG1-201ENST00000535076 HIVEP3Q5T1R4 2406 aa2.61□□□□□ -1.99
SNHG1-201ENST00000535076 OTOGQ6ZRI0 2925 aa2.61□□□□□ -1.99
SNHG1-201ENST00000535076 HECTD1Q9ULT8 2610 aa2.6□□□□□ -1.99
SNHG1-201ENST00000535076 TACC2O95359 2948 aa2.6□□□□□ -1.99
SNHG1-201ENST00000535076 ROS1P08922 2347 aa2.59□□□□□ -1.99
SNHG1-201ENST00000535076 SPRR5A0A1B0GTR4 108 aa2.59□□□□□ -1.99
SNHG1-201ENST00000535076 A0A1B0GVY2 172 aa2.59□□□□□ -1.99
SNHG1-201ENST00000535076 MAST4O15021 2626 aa2.59□□□□□ -1.99
SNHG1-201ENST00000535076 COL12A1Q99715 3063 aa2.58□□□□□ -2
SNHG1-201ENST00000535076 KRTAP10-3P60369 221 aa2.58□□□□□ -2
SNHG1-201ENST00000535076 ASH1LQ9NR48 2969 aaKnown RBP2.58□□□□□ -2
SNHG1-201ENST00000535076 NOTCH2Q04721 2471 aa2.58□□□□□ -2
SNHG1-201ENST00000535076 TEX15Q9BXT5 2789 aa2.57□□□□□ -2
SNHG1-201ENST00000535076 LRBAP50851 2863 aa2.57□□□□□ -2
SNHG1-201ENST00000535076 CELSR2Q9HCU4 2923 aa2.57□□□□□ -2
SNHG1-201ENST00000535076 SPART-AS1P0CW21 52 aa2.57□□□□□ -2
SNHG1-201ENST00000535076 MAPK1IP1LQ8NDC0 245 aa2.57□□□□□ -2
SNHG1-201ENST00000535076 ABCA12Q86UK0 2595 aa2.57□□□□□ -2
SNHG1-201ENST00000535076 CRYBG3Q68DQ2 2970 aa2.57□□□□□ -2
SNHG1-201ENST00000535076 DOPEY1Q5JWR5 2465 aa2.56□□□□□ -2
SNHG1-201ENST00000535076 KRTAP4-4Q9BYR3 166 aa2.56□□□□□ -2
SNHG1-201ENST00000535076 BSNQ9UPA5 3926 aa2.56□□□□□ -2
SNHG1-201ENST00000535076 UNC79Q9P2D8 2635 aa2.56□□□□□ -2
SNHG1-201ENST00000535076 DCHS2Q6V1P9 2916 aa2.56□□□□□ -2
SNHG1-201ENST00000535076 HIVEP2P31629 2446 aa2.56□□□□□ -2
SNHG1-201ENST00000535076 SPG11Q96JI7 2443 aa2.56□□□□□ -2
SNHG1-201ENST00000535076 KRTAP10-8P60410 259 aa2.55□□□□□ -2
SNHG1-201ENST00000535076 RELNP78509 3460 aa2.55□□□□□ -2
SNHG1-201ENST00000535076 APCP25054 2843 aa2.55□□□□□ -2
SNHG1-201ENST00000535076 POLQO75417 2590 aa2.55□□□□□ -2
SNHG1-201ENST00000535076 SPENQ96T58 3664 aaKnown RBP2.54□□□□□ -2
SNHG1-201ENST00000535076 APLNQ9ULZ1 77 aa2.53□□□□□ -2
SNHG1-201ENST00000535076 FN1P02751 2386 aaKnown RBP2.53□□□□□ -2
SNHG1-201ENST00000535076 TEP1Q99973 2627 aaKnown RBP2.52□□□□□ -2.01
SNHG1-201ENST00000535076 A0A096LNI7 61 aa2.52□□□□□ -2.01
SNHG1-201ENST00000535076 KRTAP5-9P26371 169 aa2.52□□□□□ -2.01
SNHG1-201ENST00000535076 KRTAP5-4Q6L8H1 288 aa2.52□□□□□ -2.01
SNHG1-201ENST00000535076 CREBBPQ92793 2442 aa2.52□□□□□ -2.01
SNHG1-201ENST00000535076 MTORP42345 2549 aa2.51□□□□□ -2.01
SNHG1-201ENST00000535076 HRNRQ86YZ3 2850 aaPredicted RBP2.51□□□□□ -2.01
SNHG1-201ENST00000535076 PDZD2O15018 2839 aa2.51□□□□□ -2.01
SNHG1-201ENST00000535076 CSPG4Q6UVK1 2322 aa2.51□□□□□ -2.01
SNHG1-201ENST00000535076 SETD2Q9BYW2 2564 aaPredicted RBP2.51□□□□□ -2.01
SNHG1-201ENST00000535076 MYO9AB2RTY4 2548 aa2.51□□□□□ -2.01
SNHG1-201ENST00000535076 CCDC168Q8NDH2 2452 aa2.51□□□□□ -2.01
SNHG1-201ENST00000535076 NBPF19A0A087WUL8 3843 aa2.5□□□□□ -2.01
SNHG1-201ENST00000535076 KRTAP12-1P59990 96 aa2.5□□□□□ -2.01
SNHG1-201ENST00000535076 ADGRG4Q8IZF6 3080 aa2.5□□□□□ -2.01
SNHG1-201ENST00000535076 ACANP16112 2415 aa2.49□□□□□ -2.01
SNHG1-201ENST00000535076 ZANQ9Y493 2812 aa2.49□□□□□ -2.01
SNHG1-201ENST00000535076 KRTAP13-4Q3LI77 160 aa2.49□□□□□ -2.01
SNHG1-201ENST00000535076 ANKHD1Q8IWZ3 2542 aaKnown RBP2.49□□□□□ -2.01
SNHG1-201ENST00000535076 ITPR3Q14573 2671 aa2.49□□□□□ -2.01
SNHG1-201ENST00000535076 NIPBLQ6KC79 2804 aaeCLIP2.49□□□□□ -2.012e-26■■□□□ 12.4
SNHG1-201ENST00000535076 HIVEP1P15822 2718 aa2.48□□□□□ -2.01
SNHG1-201ENST00000535076 FBN2P35556 2912 aa2.48□□□□□ -2.01
SNHG1-201ENST00000535076 SPINK6Q6UWN8 80 aa2.48□□□□□ -2.01
SNHG1-201ENST00000535076 TLN2Q9Y4G6 2542 aa2.48□□□□□ -2.01
SNHG1-201ENST00000535076 A0A0D9SG42 100 aa2.47□□□□□ -2.01
SNHG1-201ENST00000535076 M0QZ58 72 aa2.47□□□□□ -2.01
SNHG1-201ENST00000535076 Q5VSD8 79 aa2.46□□□□□ -2.02
SNHG1-201ENST00000535076 ABCA2Q9BZC7 2435 aa2.46□□□□□ -2.02
SNHG1-201ENST00000535076 CELSR1Q9NYQ6 3014 aa2.45□□□□□ -2.02
SNHG1-201ENST00000535076 LCE3EQ5T5B0 92 aa2.45□□□□□ -2.02
SNHG1-201ENST00000535076 FLNAP21333 2647 aaKnown RBP2.45□□□□□ -2.02
SNHG1-201ENST00000535076 NF1P21359 2839 aa2.44□□□□□ -2.02
SNHG1-201ENST00000535076 MXRA5Q9NR99 2828 aa2.44□□□□□ -2.02
SNHG1-201ENST00000535076 CSMD1Q96PZ7 3565 aa2.44□□□□□ -2.02
SNHG1-201ENST00000535076 F8P00451 2351 aa2.43□□□□□ -2.02
SNHG1-201ENST00000535076 AKAP9Q99996 3911 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms