RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, humanhuman

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-238ENST00000534647 SIGMAR1Q99720 223 aa6.47□□□□□ -1.37
CTNND1-238ENST00000534647 KRTAP4-1Q9BYQ7 146 aa6.47□□□□□ -1.37
CTNND1-238ENST00000534647 TRBV7-4A0A0J9YYF1 115 aa6.46□□□□□ -1.38
CTNND1-238ENST00000534647 SPRR1BP22528 89 aa6.44□□□□□ -1.38
CTNND1-238ENST00000534647 SSBP3-AS1Q7Z2R9 100 aa6.44□□□□□ -1.38
CTNND1-238ENST00000534647 UBL5Q9BZL1 73 aa6.43□□□□□ -1.38
CTNND1-238ENST00000534647 CD164Q04900 197 aa6.42□□□□□ -1.38
CTNND1-238ENST00000534647 XP32Q5T750 250 aa6.42□□□□□ -1.38
CTNND1-238ENST00000534647 LINC00643Q86TS7 51 aa6.42□□□□□ -1.38
CTNND1-238ENST00000534647 LINC00846Q9NV44 126 aa6.42□□□□□ -1.38
CTNND1-238ENST00000534647 KRTAP15-1Q3LI76 137 aa6.41□□□□□ -1.38
CTNND1-238ENST00000534647 A0A1B0GW54 56 aa6.4□□□□□ -1.38
CTNND1-238ENST00000534647 MT-ATP8P03928 68 aa6.4□□□□□ -1.38
CTNND1-238ENST00000534647 Q6JHZ5 121 aa6.4□□□□□ -1.38
CTNND1-238ENST00000534647 CRCT1Q9UGL9 99 aa6.4□□□□□ -1.38
CTNND1-238ENST00000534647 IGLV8-61A0A075B6I0 122 aa6.39□□□□□ -1.39
CTNND1-238ENST00000534647 MOBPQ13875 183 aa6.38□□□□□ -1.39
CTNND1-238ENST00000534647 C9orf153Q5TBE3 101 aa6.37□□□□□ -1.39
CTNND1-238ENST00000534647 ATP5EP2Q5VTU8 51 aa6.37□□□□□ -1.39
CTNND1-238ENST00000534647 IGFL1Q6UW32 110 aa6.37□□□□□ -1.39
CTNND1-238ENST00000534647 NREPQ16612 68 aa6.36□□□□□ -1.39
CTNND1-238ENST00000534647 A0A1W2PNM2 257 aa6.35□□□□□ -1.39
CTNND1-238ENST00000534647 KRTAP19-2Q3LHN2 52 aa6.35□□□□□ -1.39
CTNND1-238ENST00000534647 SCGB1A1P11684 91 aa6.34□□□□□ -1.39
CTNND1-238ENST00000534647 Q6Q795 121 aa6.34□□□□□ -1.39
CTNND1-238ENST00000534647 NOTCH2NLQ7Z3S9 236 aa6.34□□□□□ -1.39
CTNND1-238ENST00000534647 IMUPQ9GZP8 106 aa6.34□□□□□ -1.39
CTNND1-238ENST00000534647 IGKV3D-7A0A0C4DH55 119 aa6.33□□□□□ -1.4
CTNND1-238ENST00000534647 TRBV7-7A0A0K0K1E9 115 aa6.33□□□□□ -1.4
CTNND1-238ENST00000534647 A0A0G2JQZ4 141 aa6.3□□□□□ -1.4
CTNND1-238ENST00000534647 MT1HP80294 61 aa6.3□□□□□ -1.4
CTNND1-238ENST00000534647 FSIP2Q5CZC0 6907 aa6.29□□□□□ -1.4
CTNND1-238ENST00000534647 CXCL6P80162 114 aa6.29□□□□□ -1.4
CTNND1-238ENST00000534647 A0A087WSZ3 146 aa6.28□□□□□ -1.4
CTNND1-238ENST00000534647 BPY2O14599 106 aa6.28□□□□□ -1.4
CTNND1-238ENST00000534647 HIST1H4AP62805 103 aaKnown RBP6.28□□□□□ -1.4
CTNND1-238ENST00000534647 PCOTHQ58A44 107 aa6.26□□□□□ -1.41
CTNND1-238ENST00000534647 LIMD2Q9BT23 127 aa6.26□□□□□ -1.41
CTNND1-238ENST00000534647 HRCT1Q6UXD1 115 aa6.25□□□□□ -1.41
CTNND1-238ENST00000534647 SS18L2Q9UHA2 77 aa6.25□□□□□ -1.41
CTNND1-238ENST00000534647 FAM236AA0A1B0GUQ0 79 aa6.24□□□□□ -1.41
CTNND1-238ENST00000534647 FAM236BA0A1B0GV22 79 aa6.24□□□□□ -1.41
CTNND1-238ENST00000534647 KRTAP10-6P60371 365 aaPredicted RBP6.22□□□□□ -1.41
CTNND1-238ENST00000534647 C4orf26Q17RF5 130 aa6.22□□□□□ -1.41
CTNND1-238ENST00000534647 A0A087WVE0 104 aa6.21□□□□□ -1.42
CTNND1-238ENST00000534647 IGKV2-30P06310 120 aa6.21□□□□□ -1.42
CTNND1-238ENST00000534647 Q5XG85 94 aa6.21□□□□□ -1.42
CTNND1-238ENST00000534647 C9orf92A6NGG3 77 aa6.2□□□□□ -1.42
CTNND1-238ENST00000534647 J3KT08 172 aa6.2□□□□□ -1.42
CTNND1-238ENST00000534647 ANAPC13Q9BS18 74 aa6.19□□□□□ -1.42
CTNND1-238ENST00000534647 ATOX1O00244 68 aa6.18□□□□□ -1.42
CTNND1-238ENST00000534647 IGKV4-1P06312 121 aa6.18□□□□□ -1.42
CTNND1-238ENST00000534647 DEFB116Q30KQ4 102 aa6.17□□□□□ -1.42
CTNND1-238ENST00000534647 Q8N9L7 120 aa6.17□□□□□ -1.42
CTNND1-238ENST00000534647 NDUFB1O75438 58 aa6.16□□□□□ -1.42
CTNND1-238ENST00000534647 DSCR10P59022 87 aa6.16□□□□□ -1.42
CTNND1-238ENST00000534647 LINC00472Q9H8W2 130 aa6.16□□□□□ -1.42
CTNND1-238ENST00000534647 C1orf195Q5TG92 126 aa6.15□□□□□ -1.42
CTNND1-238ENST00000534647 K7EQZ3 153 aa6.14□□□□□ -1.43
CTNND1-238ENST00000534647 RPL37P61927 97 aaKnown RBP6.14□□□□□ -1.43
CTNND1-238ENST00000534647 A8MWP4 228 aa6.13□□□□□ -1.43
CTNND1-238ENST00000534647 SMIM26A0A096LP01 95 aa6.12□□□□□ -1.43
CTNND1-238ENST00000534647 M0R2T5 61 aa6.12□□□□□ -1.43
CTNND1-238ENST00000534647 NDUFS5O43920 106 aa6.12□□□□□ -1.43
CTNND1-238ENST00000534647 SMIM20Q8N5G0 67 aa6.12□□□□□ -1.43
CTNND1-238ENST00000534647 PSPHP1O15172 72 aa6.11□□□□□ -1.43
CTNND1-238ENST00000534647 PRR15Q8IV56 129 aa6.11□□□□□ -1.43
CTNND1-238ENST00000534647 Q96NJ1 140 aa6.11□□□□□ -1.43
CTNND1-238ENST00000534647 HCG22E2RYF7 251 aa6.1□□□□□ -1.43
CTNND1-238ENST00000534647 COX6B2Q6YFQ2 88 aa6.1□□□□□ -1.43
CTNND1-238ENST00000534647 SERP2Q8N6R1 65 aa6.08□□□□□ -1.44
CTNND1-238ENST00000534647 TRAV7A0A075B6U4 112 aa6.06□□□□□ -1.44
CTNND1-238ENST00000534647 IGHV6-1A0A0B4J1U7 121 aa6.06□□□□□ -1.44
CTNND1-238ENST00000534647 A0A1B0GVX0 72 aa6.06□□□□□ -1.44
CTNND1-238ENST00000534647 COX7CP15954 63 aa6.06□□□□□ -1.44
CTNND1-238ENST00000534647 CASC2Q6XLA1 102 aa6.06□□□□□ -1.44
CTNND1-238ENST00000534647 WFDC13Q8IUB5 93 aa6.06□□□□□ -1.44
CTNND1-238ENST00000534647 PRO0628Q9UI54 55 aa6.06□□□□□ -1.44
CTNND1-238ENST00000534647 UQCRQO14949 82 aa6.04□□□□□ -1.44
CTNND1-238ENST00000534647 C8orf17Q9NRJ1 99 aa6.04□□□□□ -1.44
CTNND1-238ENST00000534647 MMP24-AS1A0A0U1RRL7 71 aa6.02□□□□□ -1.45
CTNND1-238ENST00000534647 hDV103S1A0JD37 113 aa6.02□□□□□ -1.45
CTNND1-238ENST00000534647 C8orf87E5RJ46 101 aa6.02□□□□□ -1.45
CTNND1-238ENST00000534647 CCDC179H3BU77 68 aa6.01□□□□□ -1.45
CTNND1-238ENST00000534647 LINC00313P59037 77 aa5.98□□□□□ -1.45
CTNND1-238ENST00000534647 ATP11AUNQ6ZP68 121 aa5.98□□□□□ -1.45
CTNND1-238ENST00000534647 TMEM254Q8TBM7 123 aa5.98□□□□□ -1.45
CTNND1-238ENST00000534647 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.97□□□□□ -1.45
CTNND1-238ENST00000534647 MRPL34Q9BQ48 92 aaKnown RBP5.97□□□□□ -1.45
CTNND1-238ENST00000534647 FLGP20930 4061 aaPredicted RBP5.97□□□□□ -1.45
CTNND1-238ENST00000534647 IGKV2D-30A0A075B6S6 120 aa5.96□□□□□ -1.46
CTNND1-238ENST00000534647 NDUFAF8A1L188 74 aa5.96□□□□□ -1.46
CTNND1-238ENST00000534647 KRTAP9-7A8MTY7 169 aa5.96□□□□□ -1.46
CTNND1-238ENST00000534647 RBM12B-AS1Q9P1G2 102 aa5.96□□□□□ -1.46
CTNND1-238ENST00000534647 CAMK2N1Q7Z7J9 78 aa5.95□□□□□ -1.46
CTNND1-238ENST00000534647 C20orf197Q8N268 126 aa5.95□□□□□ -1.46
CTNND1-238ENST00000534647 KRTAP9-8Q9BYQ0 159 aa5.95□□□□□ -1.46
CTNND1-238ENST00000534647 KRTAP9-4Q9BYQ2 154 aa5.95□□□□□ -1.46
CTNND1-238ENST00000534647 TP53AIP1Q9HCN2 124 aa5.95□□□□□ -1.46
CTNND1-238ENST00000534647 MP68P56378 58 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms