RNA–Protein interactions for RNA: ENST00000534189.1

CCDC180-213, Transcript of coiled-coil domain containing 180, humanhuman

TSL 3

Gene CCDC180, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC180-213ENST00000534189 C9JAW5 83 aa8.39□□□□□ -1.07
CCDC180-213ENST00000534189 MACF1Q9UPN3 7388 aaKnown RBP8.39□□□□□ -1.07
CCDC180-213ENST00000534189 ATXN8Q156A1 80 aa8.38□□□□□ -1.07
CCDC180-213ENST00000534189 IGHV6-1A0A0B4J1U7 121 aa8.37□□□□□ -1.07
CCDC180-213ENST00000534189 KRTAP16-1A8MUX0 517 aa8.36□□□□□ -1.07
CCDC180-213ENST00000534189 SMIM6P0DI80 62 aa8.36□□□□□ -1.07
CCDC180-213ENST00000534189 NOTCH2NLQ7Z3S9 236 aa8.35□□□□□ -1.07
CCDC180-213ENST00000534189 C8orf87E5RJ46 101 aa8.33□□□□□ -1.08
CCDC180-213ENST00000534189 JMJD7-PLA2G4BH0Y9G9 81 aa8.33□□□□□ -1.08
CCDC180-213ENST00000534189 J3KT08 172 aa8.33□□□□□ -1.08
CCDC180-213ENST00000534189 NAA38Q9BRA0 125 aaKnown RBP8.33□□□□□ -1.08
CCDC180-213ENST00000534189 A0A1B0GVX0 72 aa8.32□□□□□ -1.08
CCDC180-213ENST00000534189 LYRM7Q5U5X0 104 aa8.31□□□□□ -1.08
CCDC180-213ENST00000534189 Q6ZQT0 140 aa8.31□□□□□ -1.08
CCDC180-213ENST00000534189 A0A1B0GW54 56 aa8.29□□□□□ -1.08
CCDC180-213ENST00000534189 TSTD3H0UI37 97 aa8.29□□□□□ -1.08
CCDC180-213ENST00000534189 PDE6GP18545 87 aa8.29□□□□□ -1.08
CCDC180-213ENST00000534189 NDUFB1O75438 58 aa8.28□□□□□ -1.08
CCDC180-213ENST00000534189 LOC110117498A0A087WWA1 95 aa8.27□□□□□ -1.09
CCDC180-213ENST00000534189 FAM236DA0A1B0GTK5 79 aa8.25□□□□□ -1.09
CCDC180-213ENST00000534189 FAM236CP0DP71 79 aa8.25□□□□□ -1.09
CCDC180-213ENST00000534189 BATFQ16520 125 aa8.24□□□□□ -1.09
CCDC180-213ENST00000534189 RBM12B-AS1Q9P1G2 102 aa8.23□□□□□ -1.09
CCDC180-213ENST00000534189 KRTAP19-1Q8IUB9 90 aa8.22□□□□□ -1.09
CCDC180-213ENST00000534189 C14orf132Q9NPU4 83 aa8.22□□□□□ -1.09
CCDC180-213ENST00000534189 A8MWP4 228 aa8.19□□□□□ -1.1
CCDC180-213ENST00000534189 HRES1P13985 223 aa8.19□□□□□ -1.1
CCDC180-213ENST00000534189 ZCCHC13Q8WW36 166 aaKnown RBP8.19□□□□□ -1.1
CCDC180-213ENST00000534189 NREPQ16612 68 aa8.17□□□□□ -1.1
CCDC180-213ENST00000534189 MPLKIPQ8TAP9 179 aa8.17□□□□□ -1.1
CCDC180-213ENST00000534189 C8orf17Q9NRJ1 99 aa8.17□□□□□ -1.1
CCDC180-213ENST00000534189 C9orf118A6NHY6 69 aa8.16□□□□□ -1.1
CCDC180-213ENST00000534189 Q8N9P0 234 aaPredicted RBP8.16□□□□□ -1.1
CCDC180-213ENST00000534189 IGKV3D-7A0A0C4DH55 119 aa8.14□□□□□ -1.11
CCDC180-213ENST00000534189 H3BT86 120 aa8.14□□□□□ -1.11
CCDC180-213ENST00000534189 MTURNQ8N3F0 131 aa8.14□□□□□ -1.11
CCDC180-213ENST00000534189 KRTAP9-8Q9BYQ0 159 aa8.13□□□□□ -1.11
CCDC180-213ENST00000534189 A0A1W2PPM0 123 aa8.12□□□□□ -1.11
CCDC180-213ENST00000534189 TAX1BP3O14907 124 aa8.12□□□□□ -1.11
CCDC180-213ENST00000534189 SPINK7P58062 85 aa8.12□□□□□ -1.11
CCDC180-213ENST00000534189 PRR15Q8IV56 129 aa8.12□□□□□ -1.11
CCDC180-213ENST00000534189 Q6ZVQ6 151 aa8.11□□□□□ -1.11
CCDC180-213ENST00000534189 TMEM254Q8TBM7 123 aa8.05□□□□□ -1.12
CCDC180-213ENST00000534189 LCE2BO14633 110 aa8.04□□□□□ -1.12
CCDC180-213ENST00000534189 MRPL34Q9BQ48 92 aaKnown RBP8.04□□□□□ -1.12
CCDC180-213ENST00000534189 MMP24-AS1A0A0U1RRL7 71 aa8.03□□□□□ -1.12
CCDC180-213ENST00000534189 KRTAP6-3Q3LI67 103 aa8.03□□□□□ -1.12
CCDC180-213ENST00000534189 SPCS1Q9Y6A9 102 aa8.02□□□□□ -1.13
CCDC180-213ENST00000534189 hDV103S1A0JD37 113 aa8.01□□□□□ -1.13
CCDC180-213ENST00000534189 BPY2O14599 106 aa8.01□□□□□ -1.13
CCDC180-213ENST00000534189 K7EQZ3 153 aa8□□□□□ -1.13
CCDC180-213ENST00000534189 WFDC13Q8IUB5 93 aa8□□□□□ -1.13
CCDC180-213ENST00000534189 NDUFS5O43920 106 aa7.99□□□□□ -1.13
CCDC180-213ENST00000534189 MT2AP02795 61 aa7.99□□□□□ -1.13
CCDC180-213ENST00000534189 NEBP20929 6669 aa7.99□□□□□ -1.13
CCDC180-213ENST00000534189 PCP4L1A6NKN8 68 aa7.98□□□□□ -1.13
CCDC180-213ENST00000534189 COL5A1-AS1Q5SY13 56 aa7.95□□□□□ -1.14
CCDC180-213ENST00000534189 KRTAP10-10P60014 251 aa7.93□□□□□ -1.14
CCDC180-213ENST00000534189 MT1FP04733 61 aa7.92□□□□□ -1.14
CCDC180-213ENST00000534189 SMCPP49901 116 aaPredicted RBP7.92□□□□□ -1.14
CCDC180-213ENST00000534189 KRTAP9-3Q9BYQ3 159 aa7.9□□□□□ -1.14
CCDC180-213ENST00000534189 KRTAP19-6Q3LI70 58 aa7.89□□□□□ -1.15
CCDC180-213ENST00000534189 CASC2Q6XLA1 102 aa7.89□□□□□ -1.15
CCDC180-213ENST00000534189 Q8N9L7 120 aa7.88□□□□□ -1.15
CCDC180-213ENST00000534189 LINC00846Q9NV44 126 aa7.88□□□□□ -1.15
CCDC180-213ENST00000534189 K7EP34 96 aa7.87□□□□□ -1.15
CCDC180-213ENST00000534189 UBL5Q9BZL1 73 aa7.87□□□□□ -1.15
CCDC180-213ENST00000534189 IGKV2D-30A0A075B6S6 120 aa7.86□□□□□ -1.15
CCDC180-213ENST00000534189 IGKV2-30P06310 120 aa7.86□□□□□ -1.15
CCDC180-213ENST00000534189 PRO0461Q9UI25 63 aa7.86□□□□□ -1.15
CCDC180-213ENST00000534189 HCG22E2RYF7 251 aa7.85□□□□□ -1.15
CCDC180-213ENST00000534189 Q5W150 140 aa7.85□□□□□ -1.15
CCDC180-213ENST00000534189 C7orf65Q6ZTY9 151 aa7.85□□□□□ -1.15
CCDC180-213ENST00000534189 H1FX-AS1Q4G0G2 97 aa7.84□□□□□ -1.15
CCDC180-213ENST00000534189 CXCL6P80162 114 aa7.81□□□□□ -1.16
CCDC180-213ENST00000534189 MUC12Q9UKN1 5478 aa7.81□□□□□ -1.16
CCDC180-213ENST00000534189 GTF2H5Q6ZYL4 71 aa7.8□□□□□ -1.16
CCDC180-213ENST00000534189 KRTAP20-1Q3LI63 56 aa7.77□□□□□ -1.17
CCDC180-213ENST00000534189 F8W1H4 67 aa7.75□□□□□ -1.17
CCDC180-213ENST00000534189 C4orf26Q17RF5 130 aa7.71□□□□□ -1.18
CCDC180-213ENST00000534189 ETDBQ3ZM63 59 aa7.7□□□□□ -1.18
CCDC180-213ENST00000534189 TP53AIP1Q9HCN2 124 aa7.68□□□□□ -1.18
CCDC180-213ENST00000534189 A0A1B0GV90 55 aa7.63□□□□□ -1.19
CCDC180-213ENST00000534189 C1orf64Q8NEQ6 169 aa7.59□□□□□ -1.19
CCDC180-213ENST00000534189 ACYP1P07311 99 aa7.57□□□□□ -1.2
CCDC180-213ENST00000534189 C5orf47Q569G3 176 aa7.56□□□□□ -1.2
CCDC180-213ENST00000534189 KRTAP3-1Q9BYR8 98 aa7.56□□□□□ -1.2
CCDC180-213ENST00000534189 S4R3F8 94 aa7.56□□□□□ -1.2
CCDC180-213ENST00000534189 CSAG1Q6PB30 78 aa7.53□□□□□ -1.2
CCDC180-213ENST00000534189 FAM236AA0A1B0GUQ0 79 aa7.5□□□□□ -1.21
CCDC180-213ENST00000534189 FAM236BA0A1B0GV22 79 aa7.5□□□□□ -1.21
CCDC180-213ENST00000534189 FAM240AA0A1B0GVK7 77 aa7.5□□□□□ -1.21
CCDC180-213ENST00000534189 ATP5EP2Q5VTU8 51 aa7.5□□□□□ -1.21
CCDC180-213ENST00000534189 CYP4F30PQ9H0H9 118 aa7.5□□□□□ -1.21
CCDC180-213ENST00000534189 TRAV22A0A0B4J277 110 aa7.48□□□□□ -1.21
CCDC180-213ENST00000534189 LCA10Q71F78 164 aa7.48□□□□□ -1.21
CCDC180-213ENST00000534189 MDN1Q9NU22 5596 aa7.46□□□□□ -1.21
CCDC180-213ENST00000534189 LOC101927531A0A1B0GV80 90 aa7.46□□□□□ -1.22
CCDC180-213ENST00000534189 HIST1H4AP62805 103 aaKnown RBP7.46□□□□□ -1.22
CCDC180-213ENST00000534189 UQCRQO14949 82 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms