RNA–Protein interactions for RNA: ENST00000533961.1

RDX-215, Transcript of radixin, humanhuman

TSL 2

Gene RDX, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-215ENST00000533961 HECTD4Q9Y4D8 3996 aa0.12□□□□□ -2.39
RDX-215ENST00000533961 PDE4DIPQ5VU43 2346 aa0.12□□□□□ -2.39
RDX-215ENST00000533961 CHD8Q9HCK8 2581 aa0.11□□□□□ -2.39
RDX-215ENST00000533961 COL7A1Q02388 2944 aa0.11□□□□□ -2.39
RDX-215ENST00000533961 IGSF10Q6WRI0 2623 aa0.11□□□□□ -2.39
RDX-215ENST00000533961 TNRC18O15417 2968 aaPredicted RBP0.11□□□□□ -2.39
RDX-215ENST00000533961 H0YGX0 51 aa0.11□□□□□ -2.39
RDX-215ENST00000533961 FCER1GP30273 86 aa0.11□□□□□ -2.39
RDX-215ENST00000533961 LYSTQ99698 3801 aa0.11□□□□□ -2.39
RDX-215ENST00000533961 CMC2Q9NRP2 79 aa0.11□□□□□ -2.39
RDX-215ENST00000533961 S4R3F8 94 aa0.11□□□□□ -2.39
RDX-215ENST00000533961 EFCAB6Q5THR3 1501 aa0.11□□□□□ -2.39
RDX-215ENST00000533961 A0A1B0GUL6 1792 aa0.11□□□□□ -2.39
RDX-215ENST00000533961 MUC12Q9UKN1 5478 aa0.1□□□□□ -2.39
RDX-215ENST00000533961 KIF21BO75037 1637 aa0.1□□□□□ -2.39
RDX-215ENST00000533961 DCHS2Q6V1P9 2916 aa0.1□□□□□ -2.39
RDX-215ENST00000533961 SETXQ7Z333 2677 aaKnown RBP0.1□□□□□ -2.39
RDX-215ENST00000533961 H3BUA1 57 aa0.1□□□□□ -2.39
RDX-215ENST00000533961 PLNP26678 52 aa0.1□□□□□ -2.39
RDX-215ENST00000533961 COL12A1Q99715 3063 aa0.1□□□□□ -2.39
RDX-215ENST00000533961 ZZEF1O43149 2961 aa0.09□□□□□ -2.39
RDX-215ENST00000533961 SETD2Q9BYW2 2564 aaPredicted RBP0.09□□□□□ -2.39
RDX-215ENST00000533961 IQGAP1P46940 1657 aa0.09□□□□□ -2.39
RDX-215ENST00000533961 C9orf92A6NGG3 77 aa0.09□□□□□ -2.4
RDX-215ENST00000533961 SNRPGP15A8MWD9 76 aa0.09□□□□□ -2.4
RDX-215ENST00000533961 ACANP16112 2415 aa0.09□□□□□ -2.4
RDX-215ENST00000533961 PCNX1Q96RV3 2341 aa0.09□□□□□ -2.4
RDX-215ENST00000533961 VPS13BQ7Z7G8 4022 aa0.09□□□□□ -2.4
RDX-215ENST00000533961 HSPG2P98160 4391 aa0.08□□□□□ -2.4
RDX-215ENST00000533961 APC2O95996 2303 aa0.08□□□□□ -2.4
RDX-215ENST00000533961 HTTP42858 3142 aa0.08□□□□□ -2.4
RDX-215ENST00000533961 WNK1Q9H4A3 2382 aa0.08□□□□□ -2.4
RDX-215ENST00000533961 LINC01546A6NGU7 62 aa0.08□□□□□ -2.4
RDX-215ENST00000533961 SPRR2AP35326 72 aa0.08□□□□□ -2.4
RDX-215ENST00000533961 DEFB106AQ8N104 65 aa0.08□□□□□ -2.4
RDX-215ENST00000533961 LINC00308Q8TCZ7 52 aa0.08□□□□□ -2.4
RDX-215ENST00000533961 SPRR2GQ9BYE4 73 aa0.08□□□□□ -2.4
RDX-215ENST00000533961 DOPEY1Q5JWR5 2465 aa0.08□□□□□ -2.4
RDX-215ENST00000533961 SPENQ96T58 3664 aaKnown RBP0.08□□□□□ -2.4
RDX-215ENST00000533961 FAM208AQ9UK61 1670 aaKnown RBP0.08□□□□□ -2.4
RDX-215ENST00000533961 RYR3Q15413 4870 aa0.08□□□□□ -2.4
RDX-215ENST00000533961 DDX60Q8IY21 1712 aaKnown RBP0.07□□□□□ -2.4
RDX-215ENST00000533961 CUBNO60494 3623 aa0.07□□□□□ -2.4
RDX-215ENST00000533961 IQGAP2Q13576 1575 aa0.07□□□□□ -2.4
RDX-215ENST00000533961 TIMM8BQ9Y5J9 83 aaPredicted RBP0.07□□□□□ -2.4
RDX-215ENST00000533961 FLNBO75369 2602 aaKnown RBP0.07□□□□□ -2.4
RDX-215ENST00000533961 PDZD2O15018 2839 aa0.07□□□□□ -2.4
RDX-215ENST00000533961 NBEAL2Q6ZNJ1 2754 aa0.06□□□□□ -2.4
RDX-215ENST00000533961 NF1P21359 2839 aa0.06□□□□□ -2.4
RDX-215ENST00000533961 IGLV5-48A0A075B6I7 105 aa0.06□□□□□ -2.4
RDX-215ENST00000533961 NOP10Q9NPE3 64 aaKnown RBP0.06□□□□□ -2.4
RDX-215ENST00000533961 HECTD1Q9ULT8 2610 aa0.06□□□□□ -2.4
RDX-215ENST00000533961 SVEP1Q4LDE5 3571 aa0.06□□□□□ -2.4
RDX-215ENST00000533961 FLGP20930 4061 aaPredicted RBP0.06□□□□□ -2.4
RDX-215ENST00000533961 PKD1P98161 4303 aa0.06□□□□□ -2.4
RDX-215ENST00000533961 ZANQ9Y493 2812 aa0.05□□□□□ -2.4
RDX-215ENST00000533961 LRP1BQ9NZR2 4599 aa0.05□□□□□ -2.4
RDX-215ENST00000533961 SMIM27A0A1W2PRY6 76 aa0.05□□□□□ -2.4
RDX-215ENST00000533961 MT1AP04731 61 aa0.05□□□□□ -2.4
RDX-215ENST00000533961 NBASA2RRP1 2371 aa0.05□□□□□ -2.4
RDX-215ENST00000533961 TACC2O95359 2948 aa0.05□□□□□ -2.4
RDX-215ENST00000533961 RANBP2P49792 3224 aaKnown RBP0.05□□□□□ -2.4
RDX-215ENST00000533961 FLNCQ14315 2725 aa0.05□□□□□ -2.4
RDX-215ENST00000533961 MAP1BP46821 2468 aaKnown RBP0.05□□□□□ -2.4
RDX-215ENST00000533961 DNAH3Q8TD57 4116 aa0.05□□□□□ -2.4
RDX-215ENST00000533961 AKAP9Q99996 3911 aa0.05□□□□□ -2.4
RDX-215ENST00000533961 TENM2Q9NT68 2774 aa0.04□□□□□ -2.4
RDX-215ENST00000533961 CEP290O15078 2479 aa0.04□□□□□ -2.4
RDX-215ENST00000533961 LRP2P98164 4655 aa0.04□□□□□ -2.4
RDX-215ENST00000533961 SPRR2EP22531 72 aa0.04□□□□□ -2.4
RDX-215ENST00000533961 KRTAP6-2Q3LI66 62 aa0.04□□□□□ -2.4
RDX-215ENST00000533961 DMBT1Q9UGM3 2413 aaPredicted RBP0.04□□□□□ -2.4
RDX-215ENST00000533961 MYO18BQ8IUG5 2567 aa0.03□□□□□ -2.4
RDX-215ENST00000533961 USP9XQ93008 2570 aaPredicted RBP0.03□□□□□ -2.4
RDX-215ENST00000533961 DMXL1Q9Y485 3027 aa0.03□□□□□ -2.4
RDX-215ENST00000533961 TRPM2O94759 1503 aa0.03□□□□□ -2.4
RDX-215ENST00000533961 MAP1AP78559 2803 aaPredicted RBP0.03□□□□□ -2.4
RDX-215ENST00000533961 PKHD1L1Q86WI1 4243 aa0.03□□□□□ -2.4
RDX-215ENST00000533961 PKHD1P08F94 4074 aa0.03□□□□□ -2.4
RDX-215ENST00000533961 NFAT5O94916 1531 aa0.03□□□□□ -2.41
RDX-215ENST00000533961 TRIOO75962 3097 aa0.02□□□□□ -2.41
RDX-215ENST00000533961 USH2AO75445 5202 aa0.02□□□□□ -2.41
RDX-215ENST00000533961 CLTCL1P53675 1640 aa0.02□□□□□ -2.41
RDX-215ENST00000533961 FAT3Q8TDW7 4589 aa0.02□□□□□ -2.41
RDX-215ENST00000533961 SACSQ9NZJ4 4579 aa0.02□□□□□ -2.41
RDX-215ENST00000533961 FASNP49327 2511 aaKnown RBP0.02□□□□□ -2.41
RDX-215ENST00000533961 MMP24-AS1A0A0U1RRL7 71 aa0.02□□□□□ -2.41
RDX-215ENST00000533961 A8MTW9 85 aa0.02□□□□□ -2.41
RDX-215ENST00000533961 H3BNG1 76 aa0.02□□□□□ -2.41
RDX-215ENST00000533961 ABRACLQ9P1F3 81 aa0.02□□□□□ -2.41
RDX-215ENST00000533961 SPTBN5Q9NRC6 3674 aaKnown RBP0.02□□□□□ -2.41
RDX-215ENST00000533961 ATP7AQ04656 1500 aa0.02□□□□□ -2.41
RDX-215ENST00000533961 ANK3Q12955 4377 aaKnown RBP0.01□□□□□ -2.41
RDX-215ENST00000533961 NBPF19A0A087WUL8 3843 aa0.01□□□□□ -2.41
RDX-215ENST00000533961 KALRNO60229 2985 aa0.01□□□□□ -2.41
RDX-215ENST00000533961 LAMA3Q16787 3333 aa0.01□□□□□ -2.41
RDX-215ENST00000533961 RELNP78509 3460 aa0.01□□□□□ -2.41
RDX-215ENST00000533961 LAMA5O15230 3695 aa0.01□□□□□ -2.41
RDX-215ENST00000533961 ACACBO00763 2458 aa0.01□□□□□ -2.41
RDX-215ENST00000533961 ANKRD11Q6UB99 2663 aaPredicted RBP0□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms