RNA–Protein interactions for RNA: ENST00000533733.5

ATM-222, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-222ENST00000533733 CIRBP-AS1Q8TBR5 109 aa7.09□□□□□ -1.27
ATM-222ENST00000533733 IGHV6-1A0A0B4J1U7 121 aa7.08□□□□□ -1.28
ATM-222ENST00000533733 C8orf87E5RJ46 101 aa7.08□□□□□ -1.28
ATM-222ENST00000533733 V9GYY9 64 aa7.08□□□□□ -1.28
ATM-222ENST00000533733 Q1T7F1 81 aa7.07□□□□□ -1.28
ATM-222ENST00000533733 LCE2AQ5TA79 106 aaPredicted RBP7.07□□□□□ -1.28
ATM-222ENST00000533733 DNAH5Q8TE73 4624 aa7.07□□□□□ -1.28
ATM-222ENST00000533733 ANAPC11Q9NYG5 84 aa7.06□□□□□ -1.28
ATM-222ENST00000533733 IGLV7-46A0A075B6I9 117 aa7.05□□□□□ -1.28
ATM-222ENST00000533733 DNAH11Q96DT5 4516 aa7.05□□□□□ -1.28
ATM-222ENST00000533733 KRTAP10-2P60368 255 aa7.04□□□□□ -1.28
ATM-222ENST00000533733 NDUFS5O43920 106 aa7.04□□□□□ -1.28
ATM-222ENST00000533733 FRAS1Q86XX4 4008 aa7.03□□□□□ -1.28
ATM-222ENST00000533733 C1orf195Q5TG92 126 aa7.02□□□□□ -1.29
ATM-222ENST00000533733 MPLKIPQ8TAP9 179 aa7.02□□□□□ -1.29
ATM-222ENST00000533733 PRO0628Q9UI54 55 aa7.01□□□□□ -1.29
ATM-222ENST00000533733 LOC101927531A0A1B0GV80 90 aa7.01□□□□□ -1.29
ATM-222ENST00000533733 PRR4Q16378 134 aa7□□□□□ -1.29
ATM-222ENST00000533733 LIMD2Q9BT23 127 aa7□□□□□ -1.29
ATM-222ENST00000533733 LOC100996750A0A140TA64 210 aa6.98□□□□□ -1.29
ATM-222ENST00000533733 KRTAP10-1P60331 282 aa6.98□□□□□ -1.29
ATM-222ENST00000533733 SPINK6Q6UWN8 80 aa6.98□□□□□ -1.29
ATM-222ENST00000533733 LINC00336Q6ZUF6 198 aa6.98□□□□□ -1.29
ATM-222ENST00000533733 KRTAP4-6Q9BYQ5 205 aa6.98□□□□□ -1.29
ATM-222ENST00000533733 PKD1P98161 4303 aa6.97□□□□□ -1.29
ATM-222ENST00000533733 LINC00313P59037 77 aa6.94□□□□□ -1.3
ATM-222ENST00000533733 KRTAP13-2Q52LG2 175 aa6.94□□□□□ -1.3
ATM-222ENST00000533733 FAT2Q9NYQ8 4349 aa6.93□□□□□ -1.3
ATM-222ENST00000533733 A0A087X002 238 aa6.93□□□□□ -1.3
ATM-222ENST00000533733 NOTCH2NLQ7Z3S9 236 aa6.93□□□□□ -1.3
ATM-222ENST00000533733 FAM229AH3BQW9 127 aa6.93□□□□□ -1.3
ATM-222ENST00000533733 PCOTHQ58A44 107 aa6.93□□□□□ -1.3
ATM-222ENST00000533733 COA5Q86WW8 74 aa6.93□□□□□ -1.3
ATM-222ENST00000533733 KRTAP13-3Q3SY46 172 aa6.92□□□□□ -1.3
ATM-222ENST00000533733 KRTAP1-4P0C5Y4 121 aa6.91□□□□□ -1.3
ATM-222ENST00000533733 Q8N9P0 234 aaPredicted RBP6.91□□□□□ -1.3
ATM-222ENST00000533733 BRK1Q8WUW1 75 aa6.9□□□□□ -1.3
ATM-222ENST00000533733 SPINK1P00995 79 aa6.89□□□□□ -1.31
ATM-222ENST00000533733 RPS29P62273 56 aaKnown RBP6.89□□□□□ -1.31
ATM-222ENST00000533733 LRP1BQ9NZR2 4599 aa6.88□□□□□ -1.31
ATM-222ENST00000533733 PLA2G1BP04054 148 aaKnown RBP6.86□□□□□ -1.31
ATM-222ENST00000533733 Q5W150 140 aa6.86□□□□□ -1.31
ATM-222ENST00000533733 SPAG11AQ6PDA7 123 aa6.86□□□□□ -1.31
ATM-222ENST00000533733 TYMSOSQ8TAI1 123 aa6.86□□□□□ -1.31
ATM-222ENST00000533733 PSPHP1O15172 72 aa6.84□□□□□ -1.31
ATM-222ENST00000533733 ACYP2P14621 99 aa6.83□□□□□ -1.32
ATM-222ENST00000533733 LORP23490 312 aaPredicted RBP6.83□□□□□ -1.32
ATM-222ENST00000533733 A8MUN3 132 aa6.82□□□□□ -1.32
ATM-222ENST00000533733 KRTAP16-1A8MUX0 517 aa6.81□□□□□ -1.32
ATM-222ENST00000533733 HRES1P13985 223 aa6.81□□□□□ -1.32
ATM-222ENST00000533733 Q5VV11 94 aa6.81□□□□□ -1.32
ATM-222ENST00000533733 LINC01558Q9Y6Z2 57 aa6.81□□□□□ -1.32
ATM-222ENST00000533733 IGKV2-30P06310 120 aa6.81□□□□□ -1.32
ATM-222ENST00000533733 KMT2CQ8NEZ4 4911 aaKnown RBP6.81□□□□□ -1.32
ATM-222ENST00000533733 Q75L30 129 aa6.8□□□□□ -1.32
ATM-222ENST00000533733 HYDINQ4G0P3 5121 aa6.8□□□□□ -1.32
ATM-222ENST00000533733 SACSQ9NZJ4 4579 aa6.79□□□□□ -1.32
ATM-222ENST00000533733 DMAC1Q96GE9 116 aa6.79□□□□□ -1.32
ATM-222ENST00000533733 PRR15LQ9BU68 103 aa6.79□□□□□ -1.32
ATM-222ENST00000533733 VPS13BQ7Z7G8 4022 aa6.79□□□□□ -1.32
ATM-222ENST00000533733 RYR3Q15413 4870 aa6.78□□□□□ -1.32
ATM-222ENST00000533733 LINC00304Q8N9R0 145 aa6.78□□□□□ -1.32
ATM-222ENST00000533733 CHKB-CPT1BH3BT56 60 aa6.76□□□□□ -1.33
ATM-222ENST00000533733 PRR26Q8N8Z3 221 aa6.74□□□□□ -1.33
ATM-222ENST00000533733 A0A1B0GVY2 172 aa6.73□□□□□ -1.33
ATM-222ENST00000533733 DYNC1H1Q14204 4646 aaKnown RBP6.69□□□□□ -1.34
ATM-222ENST00000533733 A6NED7 52 aa6.68□□□□□ -1.34
ATM-222ENST00000533733 APOBP04114 4563 aaKnown RBP6.66□□□□□ -1.34
ATM-222ENST00000533733 C7orf65Q6ZTY9 151 aa6.66□□□□□ -1.34
ATM-222ENST00000533733 RETNLBQ9BQ08 111 aa6.66□□□□□ -1.34
ATM-222ENST00000533733 CDC42SE1Q9NRR8 79 aa6.66□□□□□ -1.34
ATM-222ENST00000533733 IGKV2D-30A0A075B6S6 120 aa6.65□□□□□ -1.34
ATM-222ENST00000533733 ATP11AUNQ6ZP68 121 aa6.64□□□□□ -1.35
ATM-222ENST00000533733 KRTAP10-4P60372 401 aaPredicted RBP6.64□□□□□ -1.35
ATM-222ENST00000533733 SMR3BP02814 79 aaPredicted RBP6.62□□□□□ -1.35
ATM-222ENST00000533733 PKHD1P08F94 4074 aa6.62□□□□□ -1.35
ATM-222ENST00000533733 PKHD1L1Q86WI1 4243 aa6.62□□□□□ -1.35
ATM-222ENST00000533733 C20orf166-AS1Q96NR2 134 aa6.62□□□□□ -1.35
ATM-222ENST00000533733 A8MUU9 505 aa6.61□□□□□ -1.35
ATM-222ENST00000533733 LCA10Q71F78 164 aa6.59□□□□□ -1.36
ATM-222ENST00000533733 RYR2Q92736 4967 aa6.57□□□□□ -1.36
ATM-222ENST00000533733 A0A1B0GU69 56 aa6.56□□□□□ -1.36
ATM-222ENST00000533733 EPPK1P58107 5090 aaKnown RBP6.56□□□□□ -1.36
ATM-222ENST00000533733 PMAIP1Q13794 54 aa6.56□□□□□ -1.36
ATM-222ENST00000533733 SPTSSBQ8NFR3 76 aa6.56□□□□□ -1.36
ATM-222ENST00000533733 SPINK7P58062 85 aa6.53□□□□□ -1.36
ATM-222ENST00000533733 BIRC6Q9NR09 4857 aa6.52□□□□□ -1.37
ATM-222ENST00000533733 FAT1Q14517 4588 aa6.52□□□□□ -1.37
ATM-222ENST00000533733 A8MU10 97 aa6.5□□□□□ -1.37
ATM-222ENST00000533733 C9orf92A6NGG3 77 aa6.49□□□□□ -1.37
ATM-222ENST00000533733 UQCR11O14957 56 aa6.47□□□□□ -1.37
ATM-222ENST00000533733 SEC61GP60059 68 aa6.46□□□□□ -1.38
ATM-222ENST00000533733 A6NN06 94 aa6.45□□□□□ -1.38
ATM-222ENST00000533733 SPATA8Q6RVD6 105 aa6.45□□□□□ -1.38
ATM-222ENST00000533733 KTN1-AS1Q86SY8 53 aa6.45□□□□□ -1.38
ATM-222ENST00000533733 KRTAP10-8P60410 259 aa6.44□□□□□ -1.38
ATM-222ENST00000533733 Q8N1X5 172 aa6.43□□□□□ -1.38
ATM-222ENST00000533733 FLG2Q5D862 2391 aaPredicted RBP6.41□□□□□ -1.38
ATM-222ENST00000533733 FAT3Q8TDW7 4589 aa6.4□□□□□ -1.38
ATM-222ENST00000533733 MIR22HGQ0VDD5 57 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms