RNA–Protein interactions for RNA: ENST00000533683.6

SAMD1-202, Transcript of sterile alpha motif domain containing 1, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene SAMD1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1-202ENST00000533683 ZCCHC13Q8WW36 166 aaKnown RBP16.59■□□□□ 0.25
SAMD1-202ENST00000533683 RYR2Q92736 4967 aa16.57■□□□□ 0.24
SAMD1-202ENST00000533683 SPINK6Q6UWN8 80 aa16.57■□□□□ 0.24
SAMD1-202ENST00000533683 SMIM26A0A096LP01 95 aa16.56■□□□□ 0.24
SAMD1-202ENST00000533683 ATP5EP56381 51 aaPredicted RBP16.52■□□□□ 0.24
SAMD1-202ENST00000533683 MP68P56378 58 aa16.51■□□□□ 0.23
SAMD1-202ENST00000533683 NOTCH2NLQ7Z3S9 236 aa16.5■□□□□ 0.23
SAMD1-202ENST00000533683 PLA2G1BP04054 148 aaKnown RBP16.49■□□□□ 0.23
SAMD1-202ENST00000533683 KMT2CQ8NEZ4 4911 aaKnown RBP16.48■□□□□ 0.23
SAMD1-202ENST00000533683 V9GYY9 64 aa16.48■□□□□ 0.23
SAMD1-202ENST00000533683 H0Y9P7 68 aa16.47■□□□□ 0.23
SAMD1-202ENST00000533683 SMR3BP02814 79 aaPredicted RBP16.46■□□□□ 0.23
SAMD1-202ENST00000533683 SEC61GP60059 68 aa16.46■□□□□ 0.23
SAMD1-202ENST00000533683 LINC00208Q96KT6 92 aa16.45■□□□□ 0.22
SAMD1-202ENST00000533683 MRPL34Q9BQ48 92 aaKnown RBP16.4■□□□□ 0.22
SAMD1-202ENST00000533683 APOBP04114 4563 aaKnown RBP16.39■□□□□ 0.21
SAMD1-202ENST00000533683 TP53AIP1Q9HCN2 124 aa16.39■□□□□ 0.21
SAMD1-202ENST00000533683 TRAV22A0A0B4J277 110 aa16.38■□□□□ 0.21
SAMD1-202ENST00000533683 H3BPC8 53 aa16.38■□□□□ 0.21
SAMD1-202ENST00000533683 C1orf195Q5TG92 126 aa16.38■□□□□ 0.21
SAMD1-202ENST00000533683 TYMSOSQ8TAI1 123 aa16.37■□□□□ 0.21
SAMD1-202ENST00000533683 FP248Q71RG6 208 aaPredicted RBP16.37■□□□□ 0.21
SAMD1-202ENST00000533683 NDUFS5O43920 106 aa16.35■□□□□ 0.21
SAMD1-202ENST00000533683 C1orf64Q8NEQ6 169 aa16.32■□□□□ 0.2
SAMD1-202ENST00000533683 LIMD2Q9BT23 127 aa16.31■□□□□ 0.2
SAMD1-202ENST00000533683 FAT1Q14517 4588 aa16.29■□□□□ 0.2
SAMD1-202ENST00000533683 KRTAP10-4P60372 401 aaPredicted RBP16.28■□□□□ 0.2
SAMD1-202ENST00000533683 C4orf48Q5BLP8 95 aa16.28■□□□□ 0.2
SAMD1-202ENST00000533683 PRR26Q8N8Z3 221 aa16.28■□□□□ 0.2
SAMD1-202ENST00000533683 C8orf87E5RJ46 101 aa16.27■□□□□ 0.2
SAMD1-202ENST00000533683 SPINK1P00995 79 aa16.24■□□□□ 0.19
SAMD1-202ENST00000533683 BRK1Q8WUW1 75 aa16.21■□□□□ 0.19
SAMD1-202ENST00000533683 LINC00313P59037 77 aa16.21■□□□□ 0.19
SAMD1-202ENST00000533683 PRR4Q16378 134 aa16.17■□□□□ 0.18
SAMD1-202ENST00000533683 LINC00304Q8N9R0 145 aa16.16■□□□□ 0.18
SAMD1-202ENST00000533683 CYP4F30PQ9H0H9 118 aa16.14■□□□□ 0.17
SAMD1-202ENST00000533683 Q5W150 140 aa16.11■□□□□ 0.17
SAMD1-202ENST00000533683 SPANXA2-OT1Q8N9U9 137 aa16.11■□□□□ 0.17
SAMD1-202ENST00000533683 SPAG11AQ6PDA7 123 aa16.08■□□□□ 0.16
SAMD1-202ENST00000533683 RPS29P62273 56 aaKnown RBP16.07■□□□□ 0.16
SAMD1-202ENST00000533683 KRTAP13-3Q3SY46 172 aa16.07■□□□□ 0.16
SAMD1-202ENST00000533683 Q8N9P0 234 aaPredicted RBP16.06■□□□□ 0.16
SAMD1-202ENST00000533683 MPLKIPQ8TAP9 179 aa16.06■□□□□ 0.16
SAMD1-202ENST00000533683 KRTAP16-1A8MUX0 517 aa16.05■□□□□ 0.16
SAMD1-202ENST00000533683 PCOTHQ58A44 107 aa16.05■□□□□ 0.16
SAMD1-202ENST00000533683 RYR3Q15413 4870 aa16.03■□□□□ 0.16
SAMD1-202ENST00000533683 PKHD1L1Q86WI1 4243 aa16■□□□□ 0.15
SAMD1-202ENST00000533683 IGLV7-46A0A075B6I9 117 aa15.96■□□□□ 0.15
SAMD1-202ENST00000533683 LOC101927531A0A1B0GV80 90 aa15.96■□□□□ 0.14
SAMD1-202ENST00000533683 PMAIP1Q13794 54 aa15.95■□□□□ 0.14
SAMD1-202ENST00000533683 FAM229AH3BQW9 127 aa15.92■□□□□ 0.14
SAMD1-202ENST00000533683 RETNLBQ9BQ08 111 aa15.88■□□□□ 0.13
SAMD1-202ENST00000533683 HSPG2P98160 4391 aa15.87■□□□□ 0.13
SAMD1-202ENST00000533683 Q1T7F1 81 aa15.82■□□□□ 0.12
SAMD1-202ENST00000533683 Q5VSD8 79 aa15.8■□□□□ 0.12
SAMD1-202ENST00000533683 RYR1P21817 5038 aa15.74■□□□□ 0.11
SAMD1-202ENST00000533683 IGKV2-30P06310 120 aa15.73■□□□□ 0.11
SAMD1-202ENST00000533683 COA5Q86WW8 74 aa15.71■□□□□ 0.11
SAMD1-202ENST00000533683 LRP1Q07954 4544 aaKnown RBP15.69■□□□□ 0.1
SAMD1-202ENST00000533683 FLG2Q5D862 2391 aaPredicted RBP15.67■□□□□ 0.1
SAMD1-202ENST00000533683 Q8N1X5 172 aa15.66■□□□□ 0.1
SAMD1-202ENST00000533683 KRTAP17-1Q9BYP8 105 aa15.66■□□□□ 0.1
SAMD1-202ENST00000533683 HRES1P13985 223 aa15.65■□□□□ 0.1
SAMD1-202ENST00000533683 C9orf92A6NGG3 77 aa15.65■□□□□ 0.1
SAMD1-202ENST00000533683 TNXBP22105 4242 aa15.64■□□□□ 0.09
SAMD1-202ENST00000533683 KRTAP10-8P60410 259 aa15.64■□□□□ 0.09
SAMD1-202ENST00000533683 PSPHP1O15172 72 aa15.62■□□□□ 0.09
SAMD1-202ENST00000533683 IGKV2D-30A0A075B6S6 120 aa15.59■□□□□ 0.09
SAMD1-202ENST00000533683 KIAA1109Q2LD37 5005 aa15.57■□□□□ 0.08
SAMD1-202ENST00000533683 A8MUN3 132 aa15.53■□□□□ 0.08
SAMD1-202ENST00000533683 C20orf166-AS1Q96NR2 134 aa15.53■□□□□ 0.08
SAMD1-202ENST00000533683 A8MUU9 505 aa15.52■□□□□ 0.08
SAMD1-202ENST00000533683 DMAC1Q96GE9 116 aa15.49■□□□□ 0.07
SAMD1-202ENST00000533683 FAT3Q8TDW7 4589 aa15.48■□□□□ 0.07
SAMD1-202ENST00000533683 ACYP2P14621 99 aa15.46■□□□□ 0.07
SAMD1-202ENST00000533683 EPPK1P58107 5090 aaKnown RBP15.44■□□□□ 0.06
SAMD1-202ENST00000533683 Q5VV11 94 aa15.44■□□□□ 0.06
SAMD1-202ENST00000533683 C7orf65Q6ZTY9 151 aa15.41■□□□□ 0.06
SAMD1-202ENST00000533683 KTN1-AS1Q86SY8 53 aa15.39■□□□□ 0.05
SAMD1-202ENST00000533683 DMBT1Q9UGM3 2413 aaPredicted RBP15.37■□□□□ 0.05
SAMD1-202ENST00000533683 PRR15LQ9BU68 103 aa15.35■□□□□ 0.05
SAMD1-202ENST00000533683 MYCBP2O75592 4640 aa15.33■□□□□ 0.04
SAMD1-202ENST00000533683 MT1HL1P0DM35 61 aa15.31■□□□□ 0.04
SAMD1-202ENST00000533683 Q75L30 129 aa15.29■□□□□ 0.04
SAMD1-202ENST00000533683 CHKB-CPT1BH3BT56 60 aa15.25■□□□□ 0.03
SAMD1-202ENST00000533683 RBM12B-AS1Q9P1G2 102 aa15.24■□□□□ 0.03
SAMD1-202ENST00000533683 LINC01558Q9Y6Z2 57 aa15.23■□□□□ 0.03
SAMD1-202ENST00000533683 A8MU10 97 aa15.21■□□□□ 0.02
SAMD1-202ENST00000533683 ATP11AUNQ6ZP68 121 aa15.19■□□□□ 0.02
SAMD1-202ENST00000533683 SPINK7P58062 85 aa15.15■□□□□ 0.02
SAMD1-202ENST00000533683 XP32Q5T750 250 aa15.05■□□□□ 0
SAMD1-202ENST00000533683 KRTAP4-5Q9BYR2 181 aa15.04■□□□□ -0
SAMD1-202ENST00000533683 RPL37P61927 97 aaKnown RBP15.04■□□□□ -0
SAMD1-202ENST00000533683 LCA10Q71F78 164 aa15.04■□□□□ -0
SAMD1-202ENST00000533683 A6NED7 52 aa15.03■□□□□ -0
SAMD1-202ENST00000533683 A6NN06 94 aa15.03■□□□□ -0
SAMD1-202ENST00000533683 KRTAP3-1Q9BYR8 98 aa14.98□□□□□ -0.01
SAMD1-202ENST00000533683 CDC42SE1Q9NRR8 79 aa14.93□□□□□ -0.02
SAMD1-202ENST00000533683 SPTSSBQ8NFR3 76 aa14.92□□□□□ -0.02
SAMD1-202ENST00000533683 COX6B2Q6YFQ2 88 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms