RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 A0A1W2PNM2 257 aa4.75□□□□□ -1.65
COPB1-210ENST00000533533 RBM3P98179 157 aaKnown RBP4.75□□□□□ -1.65
COPB1-210ENST00000533533 Q6Q795 121 aa4.75□□□□□ -1.65
COPB1-210ENST00000533533 DSCR8Q96T75 97 aa4.75□□□□□ -1.65
COPB1-210ENST00000533533 C9orf118A6NHY6 69 aa4.74□□□□□ -1.65
COPB1-210ENST00000533533 CCKP06307 115 aa4.74□□□□□ -1.65
COPB1-210ENST00000533533 MT1HP80294 61 aa4.74□□□□□ -1.65
COPB1-210ENST00000533533 TRBV20-1A0A075B6N2 111 aa4.73□□□□□ -1.65
COPB1-210ENST00000533533 PCP4L1A6NKN8 68 aa4.73□□□□□ -1.65
COPB1-210ENST00000533533 C9JAW5 83 aa4.73□□□□□ -1.65
COPB1-210ENST00000533533 TAX1BP3O14907 124 aa4.73□□□□□ -1.65
COPB1-210ENST00000533533 TRBV7-4A0A0J9YYF1 115 aa4.72□□□□□ -1.65
COPB1-210ENST00000533533 A0A1W2PPM0 123 aa4.72□□□□□ -1.65
COPB1-210ENST00000533533 PCOTHQ58A44 107 aa4.71□□□□□ -1.66
COPB1-210ENST00000533533 SIGMAR1Q99720 223 aa4.71□□□□□ -1.66
COPB1-210ENST00000533533 JMJD7-PLA2G4BH0Y9G9 81 aa4.7□□□□□ -1.66
COPB1-210ENST00000533533 MTURNQ8N3F0 131 aa4.7□□□□□ -1.66
COPB1-210ENST00000533533 OBSCN-AS1Q96MR7 158 aa4.7□□□□□ -1.66
COPB1-210ENST00000533533 DEFB116Q30KQ4 102 aa4.69□□□□□ -1.66
COPB1-210ENST00000533533 COL5A1-AS1Q5SY13 56 aa4.69□□□□□ -1.66
COPB1-210ENST00000533533 IGKV4-1P06312 121 aa4.68□□□□□ -1.66
COPB1-210ENST00000533533 KRTAP10-6P60371 365 aaPredicted RBP4.68□□□□□ -1.66
COPB1-210ENST00000533533 C14orf132Q9NPU4 83 aa4.68□□□□□ -1.66
COPB1-210ENST00000533533 SPCS1Q9Y6A9 102 aa4.68□□□□□ -1.66
COPB1-210ENST00000533533 Q96NJ1 140 aa4.67□□□□□ -1.66
COPB1-210ENST00000533533 H3BT86 120 aa4.66□□□□□ -1.66
COPB1-210ENST00000533533 PDE6GP18545 87 aa4.65□□□□□ -1.67
COPB1-210ENST00000533533 DSCR10P59022 87 aa4.65□□□□□ -1.67
COPB1-210ENST00000533533 RPL37P61927 97 aaKnown RBP4.65□□□□□ -1.67
COPB1-210ENST00000533533 Q6ZQT0 140 aa4.65□□□□□ -1.67
COPB1-210ENST00000533533 LOC110117498A0A087WWA1 95 aa4.64□□□□□ -1.67
COPB1-210ENST00000533533 M0R2T5 61 aa4.64□□□□□ -1.67
COPB1-210ENST00000533533 C21orf62-AS1Q17RA5 79 aa4.64□□□□□ -1.67
COPB1-210ENST00000533533 FLGP20930 4061 aaPredicted RBP4.63□□□□□ -1.67
COPB1-210ENST00000533533 IGHV6-1A0A0B4J1U7 121 aa4.63□□□□□ -1.67
COPB1-210ENST00000533533 LINC00472Q9H8W2 130 aa4.63□□□□□ -1.67
COPB1-210ENST00000533533 LINC00313P59037 77 aa4.62□□□□□ -1.67
COPB1-210ENST00000533533 ATP11AUNQ6ZP68 121 aa4.62□□□□□ -1.67
COPB1-210ENST00000533533 K7EP34 96 aa4.61□□□□□ -1.67
COPB1-210ENST00000533533 COX6B2Q6YFQ2 88 aa4.61□□□□□ -1.67
COPB1-210ENST00000533533 J3KT08 172 aa4.6□□□□□ -1.67
COPB1-210ENST00000533533 NREPQ16612 68 aa4.6□□□□□ -1.67
COPB1-210ENST00000533533 Q75L30 129 aa4.6□□□□□ -1.67
COPB1-210ENST00000533533 A0A1B0GVX0 72 aa4.59□□□□□ -1.67
COPB1-210ENST00000533533 A0A1B0GW54 56 aa4.59□□□□□ -1.67
COPB1-210ENST00000533533 NDUFB1O75438 58 aa4.59□□□□□ -1.67
COPB1-210ENST00000533533 GTF2H5Q6ZYL4 71 aa4.59□□□□□ -1.67
COPB1-210ENST00000533533 NOTCH2NLQ7Z3S9 236 aa4.58□□□□□ -1.68
COPB1-210ENST00000533533 C20orf166-AS1Q96NR2 134 aa4.57□□□□□ -1.68
COPB1-210ENST00000533533 A8MUU9 505 aa4.56□□□□□ -1.68
COPB1-210ENST00000533533 C8orf87E5RJ46 101 aa4.56□□□□□ -1.68
COPB1-210ENST00000533533 PRO0461Q9UI25 63 aa4.55□□□□□ -1.68
COPB1-210ENST00000533533 KRTAP16-1A8MUX0 517 aa4.54□□□□□ -1.68
COPB1-210ENST00000533533 A8MWP4 228 aa4.54□□□□□ -1.68
COPB1-210ENST00000533533 IGKV3D-7A0A0C4DH55 119 aa4.53□□□□□ -1.68
COPB1-210ENST00000533533 F8W1H4 67 aa4.52□□□□□ -1.69
COPB1-210ENST00000533533 BPY2O14599 106 aa4.52□□□□□ -1.69
COPB1-210ENST00000533533 C8orf17Q9NRJ1 99 aa4.52□□□□□ -1.69
COPB1-210ENST00000533533 Q6ZVQ6 151 aa4.51□□□□□ -1.69
COPB1-210ENST00000533533 ETDBQ3ZM63 59 aa4.5□□□□□ -1.69
COPB1-210ENST00000533533 PRR15Q8IV56 129 aa4.5□□□□□ -1.69
COPB1-210ENST00000533533 K7EQZ3 153 aa4.49□□□□□ -1.69
COPB1-210ENST00000533533 UBL5Q9BZL1 73 aa4.49□□□□□ -1.69
COPB1-210ENST00000533533 SSPOA2VEC9 5147 aa4.49□□□□□ -1.69
COPB1-210ENST00000533533 LINC00846Q9NV44 126 aa4.48□□□□□ -1.69
COPB1-210ENST00000533533 NDUFS5O43920 106 aa4.47□□□□□ -1.69
COPB1-210ENST00000533533 Q8N9L7 120 aa4.47□□□□□ -1.69
COPB1-210ENST00000533533 USH2AO75445 5202 aa4.46□□□□□ -1.69
COPB1-210ENST00000533533 MMP24-AS1A0A0U1RRL7 71 aa4.46□□□□□ -1.7
COPB1-210ENST00000533533 hDV103S1A0JD37 113 aa4.46□□□□□ -1.7
COPB1-210ENST00000533533 ZCCHC13Q8WW36 166 aaKnown RBP4.46□□□□□ -1.7
COPB1-210ENST00000533533 WFDC13Q8IUB5 93 aa4.45□□□□□ -1.7
COPB1-210ENST00000533533 Q8N9P0 234 aaPredicted RBP4.45□□□□□ -1.7
COPB1-210ENST00000533533 TMEM254Q8TBM7 123 aa4.45□□□□□ -1.7
COPB1-210ENST00000533533 MRPL34Q9BQ48 92 aaKnown RBP4.45□□□□□ -1.7
COPB1-210ENST00000533533 FAM236DA0A1B0GTK5 79 aa4.44□□□□□ -1.7
COPB1-210ENST00000533533 FAM236CP0DP71 79 aa4.44□□□□□ -1.7
COPB1-210ENST00000533533 A0A1B0GV90 55 aa4.43□□□□□ -1.7
COPB1-210ENST00000533533 CASC2Q6XLA1 102 aa4.43□□□□□ -1.7
COPB1-210ENST00000533533 FCGBPQ9Y6R7 5405 aaPredicted RBP4.42□□□□□ -1.7
COPB1-210ENST00000533533 RBM12B-AS1Q9P1G2 102 aa4.41□□□□□ -1.7
COPB1-210ENST00000533533 SPINK7P58062 85 aa4.4□□□□□ -1.71
COPB1-210ENST00000533533 KRTAP3-1Q9BYR8 98 aa4.4□□□□□ -1.71
COPB1-210ENST00000533533 HCG22E2RYF7 251 aa4.39□□□□□ -1.71
COPB1-210ENST00000533533 ACYP1P07311 99 aa4.38□□□□□ -1.71
COPB1-210ENST00000533533 HRES1P13985 223 aa4.38□□□□□ -1.71
COPB1-210ENST00000533533 MT2AP02795 61 aa4.37□□□□□ -1.71
COPB1-210ENST00000533533 CXCL6P80162 114 aa4.37□□□□□ -1.71
COPB1-210ENST00000533533 IGKV2D-30A0A075B6S6 120 aa4.36□□□□□ -1.71
COPB1-210ENST00000533533 IGKV2-30P06310 120 aa4.36□□□□□ -1.71
COPB1-210ENST00000533533 FAM240AA0A1B0GVK7 77 aa4.34□□□□□ -1.71
COPB1-210ENST00000533533 Q5W150 140 aa4.34□□□□□ -1.71
COPB1-210ENST00000533533 MT1FP04733 61 aa4.33□□□□□ -1.72
COPB1-210ENST00000533533 HIST1H4AP62805 103 aaKnown RBP4.33□□□□□ -1.72
COPB1-210ENST00000533533 C7orf65Q6ZTY9 151 aa4.32□□□□□ -1.72
COPB1-210ENST00000533533 MPLKIPQ8TAP9 179 aa4.32□□□□□ -1.72
COPB1-210ENST00000533533 SYNE2Q8WXH0 6885 aaKnown RBP4.32□□□□□ -1.72
COPB1-210ENST00000533533 MACF1Q9UPN3 7388 aaKnown RBP4.31□□□□□ -1.72
COPB1-210ENST00000533533 KRTAP10-10P60014 251 aa4.31□□□□□ -1.72
COPB1-210ENST00000533533 ATP5EP2Q5VTU8 51 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms