RNA–Protein interactions for RNA: ENST00000533390.5

AP004608.1-202, humanhuman

TSL 1 (best) BASIC

Gene AP004608.1, Length 1,863 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004608.1-202ENST00000533390 CYSTM1Q9H1C7 97 aa12.57□□□□□ -0.4
AP004608.1-202ENST00000533390 FAT1Q14517 4588 aa12.56□□□□□ -0.4
AP004608.1-202ENST00000533390 C1orf195Q5TG92 126 aa12.55□□□□□ -0.4
AP004608.1-202ENST00000533390 SPAG11AQ6PDA7 123 aa12.55□□□□□ -0.4
AP004608.1-202ENST00000533390 SNURFQ9Y675 71 aa12.55□□□□□ -0.4
AP004608.1-202ENST00000533390 C5orf47Q569G3 176 aa12.51□□□□□ -0.41
AP004608.1-202ENST00000533390 Q5VSD8 79 aa12.51□□□□□ -0.41
AP004608.1-202ENST00000533390 RPS29P62273 56 aaKnown RBP12.5□□□□□ -0.41
AP004608.1-202ENST00000533390 C8orf87E5RJ46 101 aa12.48□□□□□ -0.41
AP004608.1-202ENST00000533390 A0A0U1RQV1 116 aa12.47□□□□□ -0.41
AP004608.1-202ENST00000533390 NOTCH2NLQ7Z3S9 236 aa12.47□□□□□ -0.41
AP004608.1-202ENST00000533390 MRPL34Q9BQ48 92 aaKnown RBP12.47□□□□□ -0.41
AP004608.1-202ENST00000533390 TMEM258P61165 79 aa12.46□□□□□ -0.42
AP004608.1-202ENST00000533390 NDUFC1O43677 76 aa12.44□□□□□ -0.42
AP004608.1-202ENST00000533390 MP68P56378 58 aa12.43□□□□□ -0.42
AP004608.1-202ENST00000533390 TP53AIP1Q9HCN2 124 aa12.43□□□□□ -0.42
AP004608.1-202ENST00000533390 NDUFS5O43920 106 aa12.42□□□□□ -0.42
AP004608.1-202ENST00000533390 H7BZZ5 65 aa12.42□□□□□ -0.42
AP004608.1-202ENST00000533390 LINC00313P59037 77 aa12.41□□□□□ -0.42
AP004608.1-202ENST00000533390 H0Y9P7 68 aa12.38□□□□□ -0.43
AP004608.1-202ENST00000533390 PKHD1L1Q86WI1 4243 aa12.37□□□□□ -0.43
AP004608.1-202ENST00000533390 HSPG2P98160 4391 aa12.37□□□□□ -0.43
AP004608.1-202ENST00000533390 TRAV22A0A0B4J277 110 aa12.36□□□□□ -0.43
AP004608.1-202ENST00000533390 H3BPC8 53 aa12.34□□□□□ -0.43
AP004608.1-202ENST00000533390 ZCCHC13Q8WW36 166 aaKnown RBP12.34□□□□□ -0.43
AP004608.1-202ENST00000533390 LINC00208Q96KT6 92 aa12.33□□□□□ -0.44
AP004608.1-202ENST00000533390 RYR1P21817 5038 aa12.32□□□□□ -0.44
AP004608.1-202ENST00000533390 FAM236DA0A1B0GTK5 79 aa12.29□□□□□ -0.44
AP004608.1-202ENST00000533390 FAM236CP0DP71 79 aa12.29□□□□□ -0.44
AP004608.1-202ENST00000533390 Q8N1X5 172 aa12.29□□□□□ -0.44
AP004608.1-202ENST00000533390 C1orf64Q8NEQ6 169 aa12.25□□□□□ -0.45
AP004608.1-202ENST00000533390 KRTAP17-1Q9BYP8 105 aa12.24□□□□□ -0.45
AP004608.1-202ENST00000533390 KRTAP10-8P60410 259 aa12.23□□□□□ -0.45
AP004608.1-202ENST00000533390 Q8N9P0 234 aaPredicted RBP12.23□□□□□ -0.45
AP004608.1-202ENST00000533390 KRTAP16-1A8MUX0 517 aa12.22□□□□□ -0.45
AP004608.1-202ENST00000533390 ATP5EP56381 51 aaPredicted RBP12.22□□□□□ -0.45
AP004608.1-202ENST00000533390 KIAA1109Q2LD37 5005 aa12.16□□□□□ -0.46
AP004608.1-202ENST00000533390 RETNLBQ9BQ08 111 aa12.15□□□□□ -0.46
AP004608.1-202ENST00000533390 EPPK1P58107 5090 aaKnown RBP12.15□□□□□ -0.46
AP004608.1-202ENST00000533390 Q5W150 140 aa12.14□□□□□ -0.47
AP004608.1-202ENST00000533390 RPS28P62857 69 aaKnown RBP12.11□□□□□ -0.47
AP004608.1-202ENST00000533390 FLG2Q5D862 2391 aaPredicted RBP12.11□□□□□ -0.47
AP004608.1-202ENST00000533390 KRTAP13-3Q3SY46 172 aa12.1□□□□□ -0.47
AP004608.1-202ENST00000533390 LOC101927531A0A1B0GV80 90 aa12.09□□□□□ -0.47
AP004608.1-202ENST00000533390 LRP1Q07954 4544 aaKnown RBP12.08□□□□□ -0.48
AP004608.1-202ENST00000533390 SERP1Q9Y6X1 66 aa12.07□□□□□ -0.48
AP004608.1-202ENST00000533390 C9orf92A6NGG3 77 aa12.06□□□□□ -0.48
AP004608.1-202ENST00000533390 TNXBP22105 4242 aa12.05□□□□□ -0.48
AP004608.1-202ENST00000533390 PCOTHQ58A44 107 aa12.04□□□□□ -0.48
AP004608.1-202ENST00000533390 SPANXA2-OT1Q8N9U9 137 aa12.04□□□□□ -0.48
AP004608.1-202ENST00000533390 FAT3Q8TDW7 4589 aa12.02□□□□□ -0.48
AP004608.1-202ENST00000533390 MT1HL1P0DM35 61 aa12□□□□□ -0.49
AP004608.1-202ENST00000533390 PRR4Q16378 134 aa12□□□□□ -0.49
AP004608.1-202ENST00000533390 CYP4F30PQ9H0H9 118 aa11.99□□□□□ -0.49
AP004608.1-202ENST00000533390 FP248Q71RG6 208 aaPredicted RBP11.98□□□□□ -0.49
AP004608.1-202ENST00000533390 OXTP01178 125 aa11.97□□□□□ -0.49
AP004608.1-202ENST00000533390 C20orf166-AS1Q96NR2 134 aa11.95□□□□□ -0.5
AP004608.1-202ENST00000533390 IGLV7-46A0A075B6I9 117 aa11.94□□□□□ -0.5
AP004608.1-202ENST00000533390 A8MUU9 505 aa11.93□□□□□ -0.5
AP004608.1-202ENST00000533390 IGKV2-30P06310 120 aa11.93□□□□□ -0.5
AP004608.1-202ENST00000533390 KRTAP4-5Q9BYR2 181 aa11.9□□□□□ -0.5
AP004608.1-202ENST00000533390 DMBT1Q9UGM3 2413 aaPredicted RBP11.9□□□□□ -0.5
AP004608.1-202ENST00000533390 IGKV2D-30A0A075B6S6 120 aa11.87□□□□□ -0.51
AP004608.1-202ENST00000533390 MYCBP2O75592 4640 aa11.82□□□□□ -0.52
AP004608.1-202ENST00000533390 Q75L30 129 aa11.82□□□□□ -0.52
AP004608.1-202ENST00000533390 HRES1P13985 223 aa11.8□□□□□ -0.52
AP004608.1-202ENST00000533390 C7orf65Q6ZTY9 151 aa11.79□□□□□ -0.52
AP004608.1-202ENST00000533390 SMIM26A0A096LP01 95 aa11.78□□□□□ -0.52
AP004608.1-202ENST00000533390 COA5Q86WW8 74 aa11.7□□□□□ -0.54
AP004608.1-202ENST00000533390 BIRC6Q9NR09 4857 aa11.7□□□□□ -0.54
AP004608.1-202ENST00000533390 XP32Q5T750 250 aa11.68□□□□□ -0.54
AP004608.1-202ENST00000533390 ATP11AUNQ6ZP68 121 aa11.68□□□□□ -0.54
AP004608.1-202ENST00000533390 RPL37P61927 97 aaKnown RBP11.66□□□□□ -0.54
AP004608.1-202ENST00000533390 ACYP2P14621 99 aa11.66□□□□□ -0.54
AP004608.1-202ENST00000533390 DMAC1Q96GE9 116 aa11.66□□□□□ -0.54
AP004608.1-202ENST00000533390 J3QL48 77 aa11.63□□□□□ -0.55
AP004608.1-202ENST00000533390 SPINK7P58062 85 aa11.6□□□□□ -0.55
AP004608.1-202ENST00000533390 TPRXLQ17RH7 258 aa11.6□□□□□ -0.55
AP004608.1-202ENST00000533390 MPLKIPQ8TAP9 179 aa11.57□□□□□ -0.56
AP004608.1-202ENST00000533390 HERC2O95714 4834 aa11.55□□□□□ -0.56
AP004608.1-202ENST00000533390 C4orf26Q17RF5 130 aa11.53□□□□□ -0.56
AP004608.1-202ENST00000533390 ABCA13Q86UQ4 5058 aa11.52□□□□□ -0.57
AP004608.1-202ENST00000533390 CHKB-CPT1BH3BT56 60 aa11.51□□□□□ -0.57
AP004608.1-202ENST00000533390 Q1T7F1 81 aa11.49□□□□□ -0.57
AP004608.1-202ENST00000533390 A8MUN3 132 aa11.49□□□□□ -0.57
AP004608.1-202ENST00000533390 V9GYY9 64 aa11.47□□□□□ -0.57
AP004608.1-202ENST00000533390 COX6B2Q6YFQ2 88 aa11.35□□□□□ -0.59
AP004608.1-202ENST00000533390 KRTAP3-1Q9BYR8 98 aa11.32□□□□□ -0.6
AP004608.1-202ENST00000533390 PSPHP1O15172 72 aa11.3□□□□□ -0.6
AP004608.1-202ENST00000533390 LINC01558Q9Y6Z2 57 aa11.29□□□□□ -0.6
AP004608.1-202ENST00000533390 PRR15LQ9BU68 103 aa11.26□□□□□ -0.61
AP004608.1-202ENST00000533390 LPAP08519 4548 aa11.25□□□□□ -0.61
AP004608.1-202ENST00000533390 LRP2P98164 4655 aa11.23□□□□□ -0.61
AP004608.1-202ENST00000533390 SEC61BP60468 96 aaKnown RBP11.22□□□□□ -0.61
AP004608.1-202ENST00000533390 SPTSSBQ8NFR3 76 aa11.21□□□□□ -0.61
AP004608.1-202ENST00000533390 Q5VV11 94 aa11.18□□□□□ -0.62
AP004608.1-202ENST00000533390 RBM12B-AS1Q9P1G2 102 aa11.09□□□□□ -0.63
AP004608.1-202ENST00000533390 A0A1B0GU69 56 aa11.08□□□□□ -0.64
AP004608.1-202ENST00000533390 PCLOQ9Y6V0 5065 aa11.08□□□□□ -0.64
AP004608.1-202ENST00000533390 BRK1Q8WUW1 75 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms