RNA–Protein interactions for RNA: ENST00000532661.5

LTBP3-220, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 3

Gene LTBP3, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-220ENST00000532661 C20orf166-AS1Q96NR2 134 aa11.91□□□□□ -0.5
LTBP3-220ENST00000532661 A8MUU9 505 aa11.89□□□□□ -0.51
LTBP3-220ENST00000532661 DSCR10P59022 87 aa11.89□□□□□ -0.51
LTBP3-220ENST00000532661 A0A1B0GV72 72 aa11.88□□□□□ -0.51
LTBP3-220ENST00000532661 JMJD7-PLA2G4BH0Y9G9 81 aa11.83□□□□□ -0.52
LTBP3-220ENST00000532661 SIGMAR1Q99720 223 aa11.83□□□□□ -0.52
LTBP3-220ENST00000532661 TRBV7-4A0A0J9YYF1 115 aa11.79□□□□□ -0.52
LTBP3-220ENST00000532661 ETDBQ3ZM63 59 aa11.79□□□□□ -0.52
LTBP3-220ENST00000532661 IGKV4-1P06312 121 aa11.78□□□□□ -0.52
LTBP3-220ENST00000532661 RBM3P98179 157 aaKnown RBP11.78□□□□□ -0.52
LTBP3-220ENST00000532661 LINC00313P59037 77 aa11.76□□□□□ -0.53
LTBP3-220ENST00000532661 DEFB116Q30KQ4 102 aa11.76□□□□□ -0.53
LTBP3-220ENST00000532661 KRTAP16-1A8MUX0 517 aa11.74□□□□□ -0.53
LTBP3-220ENST00000532661 NOTCH2NLQ7Z3S9 236 aa11.74□□□□□ -0.53
LTBP3-220ENST00000532661 CCKP06307 115 aa11.73□□□□□ -0.53
LTBP3-220ENST00000532661 DSCR8Q96T75 97 aa11.73□□□□□ -0.53
LTBP3-220ENST00000532661 LINC00472Q9H8W2 130 aa11.72□□□□□ -0.53
LTBP3-220ENST00000532661 LOC110117498A0A087WWA1 95 aa11.71□□□□□ -0.53
LTBP3-220ENST00000532661 C14orf132Q9NPU4 83 aa11.71□□□□□ -0.53
LTBP3-220ENST00000532661 PDE6GP18545 87 aa11.7□□□□□ -0.54
LTBP3-220ENST00000532661 C21orf62-AS1Q17RA5 79 aa11.69□□□□□ -0.54
LTBP3-220ENST00000532661 Q6ZQT0 140 aa11.67□□□□□ -0.54
LTBP3-220ENST00000532661 IGHV6-1A0A0B4J1U7 121 aa11.64□□□□□ -0.55
LTBP3-220ENST00000532661 VPS25Q9BRG1 176 aa11.64□□□□□ -0.55
LTBP3-220ENST00000532661 KRTAP9-8Q9BYQ0 159 aa11.61□□□□□ -0.55
LTBP3-220ENST00000532661 A0A1B0GW54 56 aa11.56□□□□□ -0.56
LTBP3-220ENST00000532661 J3QR89 54 aa11.55□□□□□ -0.56
LTBP3-220ENST00000532661 HRES1P13985 223 aa11.55□□□□□ -0.56
LTBP3-220ENST00000532661 FAM236DA0A1B0GTK5 79 aa11.54□□□□□ -0.56
LTBP3-220ENST00000532661 A0A1B0GVX0 72 aa11.54□□□□□ -0.56
LTBP3-220ENST00000532661 FAM236CP0DP71 79 aa11.54□□□□□ -0.56
LTBP3-220ENST00000532661 MPLKIPQ8TAP9 179 aa11.53□□□□□ -0.56
LTBP3-220ENST00000532661 FAM240AA0A1B0GVK7 77 aa11.51□□□□□ -0.57
LTBP3-220ENST00000532661 C8orf87E5RJ46 101 aa11.51□□□□□ -0.57
LTBP3-220ENST00000532661 ACYP1P07311 99 aa11.49□□□□□ -0.57
LTBP3-220ENST00000532661 USH2AO75445 5202 aa11.49□□□□□ -0.57
LTBP3-220ENST00000532661 K7ERU9 68 aa11.48□□□□□ -0.57
LTBP3-220ENST00000532661 RBM12B-AS1Q9P1G2 102 aa11.48□□□□□ -0.57
LTBP3-220ENST00000532661 J3KT08 172 aa11.43□□□□□ -0.58
LTBP3-220ENST00000532661 MT2AP02795 61 aa11.43□□□□□ -0.58
LTBP3-220ENST00000532661 LINC00846Q9NV44 126 aa11.42□□□□□ -0.58
LTBP3-220ENST00000532661 ZCCHC13Q8WW36 166 aaKnown RBP11.41□□□□□ -0.58
LTBP3-220ENST00000532661 SSPOA2VEC9 5147 aa11.4□□□□□ -0.59
LTBP3-220ENST00000532661 UBL5Q9BZL1 73 aa11.38□□□□□ -0.59
LTBP3-220ENST00000532661 NREPQ16612 68 aa11.37□□□□□ -0.59
LTBP3-220ENST00000532661 NDUFB1O75438 58 aa11.35□□□□□ -0.59
LTBP3-220ENST00000532661 MT1FP04733 61 aa11.35□□□□□ -0.59
LTBP3-220ENST00000532661 SPINK7P58062 85 aa11.35□□□□□ -0.59
LTBP3-220ENST00000532661 Q6ZVQ6 151 aa11.35□□□□□ -0.59
LTBP3-220ENST00000532661 Q8N9P0 234 aaPredicted RBP11.34□□□□□ -0.59
LTBP3-220ENST00000532661 A8MWP4 228 aa11.32□□□□□ -0.6
LTBP3-220ENST00000532661 C8orf17Q9NRJ1 99 aa11.32□□□□□ -0.6
LTBP3-220ENST00000532661 IGKV3D-7A0A0C4DH55 119 aa11.31□□□□□ -0.6
LTBP3-220ENST00000532661 KRTAP10-10P60014 251 aa11.27□□□□□ -0.61
LTBP3-220ENST00000532661 LINC00643Q86TS7 51 aa11.26□□□□□ -0.61
LTBP3-220ENST00000532661 KRTAP9-3Q9BYQ3 159 aa11.25□□□□□ -0.61
LTBP3-220ENST00000532661 LCE2BO14633 110 aa11.24□□□□□ -0.61
LTBP3-220ENST00000532661 BPY2O14599 106 aa11.23□□□□□ -0.61
LTBP3-220ENST00000532661 ATP5EP2Q5VTU8 51 aa11.22□□□□□ -0.61
LTBP3-220ENST00000532661 CXCL6P80162 114 aa11.2□□□□□ -0.62
LTBP3-220ENST00000532661 PRR15Q8IV56 129 aa11.2□□□□□ -0.62
LTBP3-220ENST00000532661 WFDC13Q8IUB5 93 aa11.19□□□□□ -0.62
LTBP3-220ENST00000532661 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.18□□□□□ -0.62
LTBP3-220ENST00000532661 MMP24-AS1A0A0U1RRL7 71 aa11.14□□□□□ -0.63
LTBP3-220ENST00000532661 FCGBPQ9Y6R7 5405 aaPredicted RBP11.14□□□□□ -0.63
LTBP3-220ENST00000532661 MRPL34Q9BQ48 92 aaKnown RBP11.12□□□□□ -0.63
LTBP3-220ENST00000532661 TMEM254Q8TBM7 123 aa11.11□□□□□ -0.63
LTBP3-220ENST00000532661 KRTAP19-1Q8IUB9 90 aa11.1□□□□□ -0.63
LTBP3-220ENST00000532661 K7EQZ3 153 aa11.09□□□□□ -0.63
LTBP3-220ENST00000532661 MT-ATP8P03928 68 aa11.07□□□□□ -0.64
LTBP3-220ENST00000532661 KRTAP9-7A8MTY7 169 aa11.06□□□□□ -0.64
LTBP3-220ENST00000532661 Q8N9L7 120 aa11.06□□□□□ -0.64
LTBP3-220ENST00000532661 hDV103S1A0JD37 113 aa11.05□□□□□ -0.64
LTBP3-220ENST00000532661 IMUPQ9GZP8 106 aa11.03□□□□□ -0.64
LTBP3-220ENST00000532661 NDUFS5O43920 106 aa11.02□□□□□ -0.65
LTBP3-220ENST00000532661 HIST1H4AP62805 103 aaKnown RBP11.02□□□□□ -0.65
LTBP3-220ENST00000532661 H1FX-AS1Q4G0G2 97 aa10.95□□□□□ -0.66
LTBP3-220ENST00000532661 Q5W150 140 aa10.95□□□□□ -0.66
LTBP3-220ENST00000532661 A0A087WVE0 104 aa10.94□□□□□ -0.66
LTBP3-220ENST00000532661 HCG22E2RYF7 251 aa10.93□□□□□ -0.66
LTBP3-220ENST00000532661 IGKV2D-30A0A075B6S6 120 aa10.92□□□□□ -0.66
LTBP3-220ENST00000532661 IGKV2-30P06310 120 aa10.92□□□□□ -0.66
LTBP3-220ENST00000532661 CASC2Q6XLA1 102 aa10.89□□□□□ -0.67
LTBP3-220ENST00000532661 C7orf65Q6ZTY9 151 aa10.86□□□□□ -0.67
LTBP3-220ENST00000532661 KRTAP19-6Q3LI70 58 aa10.83□□□□□ -0.68
LTBP3-220ENST00000532661 FAM236AA0A1B0GUQ0 79 aa10.79□□□□□ -0.68
LTBP3-220ENST00000532661 FAM236BA0A1B0GV22 79 aa10.79□□□□□ -0.68
LTBP3-220ENST00000532661 C4orf26Q17RF5 130 aa10.76□□□□□ -0.69
LTBP3-220ENST00000532661 SCGB1A1P11684 91 aa10.72□□□□□ -0.69
LTBP3-220ENST00000532661 MACF1Q9UPN3 7388 aaKnown RBP10.7□□□□□ -0.7
LTBP3-220ENST00000532661 ATOX1O00244 68 aa10.69□□□□□ -0.7
LTBP3-220ENST00000532661 TP53AIP1Q9HCN2 124 aa10.69□□□□□ -0.7
LTBP3-220ENST00000532661 SMIM20Q8N5G0 67 aa10.65□□□□□ -0.7
LTBP3-220ENST00000532661 OCR1Q9BZK8 76 aa10.65□□□□□ -0.7
LTBP3-220ENST00000532661 SYNE2Q8WXH0 6885 aaKnown RBP10.64□□□□□ -0.71
LTBP3-220ENST00000532661 KRTAP3-1Q9BYR8 98 aa10.63□□□□□ -0.71
LTBP3-220ENST00000532661 UQCRQO14949 82 aa10.62□□□□□ -0.71
LTBP3-220ENST00000532661 C5orf47Q569G3 176 aa10.61□□□□□ -0.71
LTBP3-220ENST00000532661 TRAV7A0A075B6U4 112 aa10.58□□□□□ -0.72
LTBP3-220ENST00000532661 TRAV22A0A0B4J277 110 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms