RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 MOBPQ13875 183 aa3.33□□□□□ -1.88
HMGB1P42-201ENST00000532126 SPAG11AQ6PDA7 123 aa3.33□□□□□ -1.88
HMGB1P42-201ENST00000532126 SMIM11BQ8TCY0 68 aa3.33□□□□□ -1.88
HMGB1P42-201ENST00000532126 SPCS1Q9Y6A9 102 aa3.33□□□□□ -1.88
HMGB1P42-201ENST00000532126 A6NED7 52 aa3.32□□□□□ -1.88
HMGB1P42-201ENST00000532126 CCDC179H3BU77 68 aa3.32□□□□□ -1.88
HMGB1P42-201ENST00000532126 DEFB116Q30KQ4 102 aa3.32□□□□□ -1.88
HMGB1P42-201ENST00000532126 C9orf153Q5TBE3 101 aa3.32□□□□□ -1.88
HMGB1P42-201ENST00000532126 SSBP3-AS1Q7Z2R9 100 aa3.32□□□□□ -1.88
HMGB1P42-201ENST00000532126 SPANXA2-OT1Q8N9U9 137 aa3.32□□□□□ -1.88
HMGB1P42-201ENST00000532126 DEFB105AQ8NG35 78 aa3.32□□□□□ -1.88
HMGB1P42-201ENST00000532126 HIGD1BQ9P298 99 aa3.32□□□□□ -1.88
HMGB1P42-201ENST00000532126 A8MWP4 228 aa3.31□□□□□ -1.88
HMGB1P42-201ENST00000532126 SPINK1P00995 79 aa3.31□□□□□ -1.88
HMGB1P42-201ENST00000532126 SPRR1BP22528 89 aa3.31□□□□□ -1.88
HMGB1P42-201ENST00000532126 HRCT1Q6UXD1 115 aa3.31□□□□□ -1.88
HMGB1P42-201ENST00000532126 NHP2Q9NX24 153 aaKnown RBP3.31□□□□□ -1.88
HMGB1P42-201ENST00000532126 TEX49A0A1B0GTD5 131 aa3.3□□□□□ -1.88
HMGB1P42-201ENST00000532126 MT-ATP8P03928 68 aa3.3□□□□□ -1.88
HMGB1P42-201ENST00000532126 C2orf91Q6ZV80 131 aa3.3□□□□□ -1.88
HMGB1P42-201ENST00000532126 RAB37Q96AX2 223 aa3.3□□□□□ -1.88
HMGB1P42-201ENST00000532126 RETNLBQ9BQ08 111 aa3.3□□□□□ -1.88
HMGB1P42-201ENST00000532126 H3BMG7 143 aa3.29□□□□□ -1.88
HMGB1P42-201ENST00000532126 H7C2G1 150 aa3.29□□□□□ -1.88
HMGB1P42-201ENST00000532126 IGLV5-48A0A075B6I7 105 aa3.28□□□□□ -1.88
HMGB1P42-201ENST00000532126 A0A0B4J2C4 111 aa3.28□□□□□ -1.88
HMGB1P42-201ENST00000532126 hADV29S1A0JD25 119 aa3.28□□□□□ -1.88
HMGB1P42-201ENST00000532126 H3BUT2 72 aa3.28□□□□□ -1.88
HMGB1P42-201ENST00000532126 RPS29P62273 56 aaKnown RBP3.28□□□□□ -1.88
HMGB1P42-201ENST00000532126 Q5W150 140 aa3.28□□□□□ -1.88
HMGB1P42-201ENST00000532126 LINC00575Q6W349 94 aa3.28□□□□□ -1.88
HMGB1P42-201ENST00000532126 NAA38Q9BRA0 125 aaKnown RBP3.28□□□□□ -1.88
HMGB1P42-201ENST00000532126 UQCRQO14949 82 aa3.27□□□□□ -1.89
HMGB1P42-201ENST00000532126 SNCGO76070 127 aa3.27□□□□□ -1.89
HMGB1P42-201ENST00000532126 TMEM258P61165 79 aa3.27□□□□□ -1.89
HMGB1P42-201ENST00000532126 LINC01554Q52M75 96 aa3.27□□□□□ -1.89
HMGB1P42-201ENST00000532126 PPDPFLQ8WWR9 84 aa3.27□□□□□ -1.89
HMGB1P42-201ENST00000532126 PRO1854Q9UHT4 67 aa3.27□□□□□ -1.89
HMGB1P42-201ENST00000532126 RNF213Q63HN8 5207 aa3.27□□□□□ -1.89
HMGB1P42-201ENST00000532126 LRP2P98164 4655 aa3.26□□□□□ -1.89
HMGB1P42-201ENST00000532126 FXYD2P54710 66 aa3.26□□□□□ -1.89
HMGB1P42-201ENST00000532126 Q6ZQY7 126 aa3.26□□□□□ -1.89
HMGB1P42-201ENST00000532126 FP248Q71RG6 208 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P42-201ENST00000532126 F8WEM9 126 aa3.25□□□□□ -1.89
HMGB1P42-201ENST00000532126 H0YGX0 51 aa3.25□□□□□ -1.89
HMGB1P42-201ENST00000532126 Q5XG85 94 aa3.25□□□□□ -1.89
HMGB1P42-201ENST00000532126 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P42-201ENST00000532126 LIMD2Q9BT23 127 aa3.25□□□□□ -1.89
HMGB1P42-201ENST00000532126 PRO0461Q9UI25 63 aa3.25□□□□□ -1.89
HMGB1P42-201ENST00000532126 TMEM256-PLSCR3K7ERE1 68 aa3.24□□□□□ -1.89
HMGB1P42-201ENST00000532126 K7ERJ3 54 aa3.24□□□□□ -1.89
HMGB1P42-201ENST00000532126 TPRXLQ17RH7 258 aa3.24□□□□□ -1.89
HMGB1P42-201ENST00000532126 ETDBQ3ZM63 59 aa3.24□□□□□ -1.89
HMGB1P42-201ENST00000532126 KRTAP5-3Q6L8H2 238 aa3.24□□□□□ -1.89
HMGB1P42-201ENST00000532126 ADM2Q7Z4H4 148 aa3.24□□□□□ -1.89
HMGB1P42-201ENST00000532126 LPAP08519 4548 aa3.24□□□□□ -1.89
HMGB1P42-201ENST00000532126 A0A0G2JQZ4 141 aa3.23□□□□□ -1.89
HMGB1P42-201ENST00000532126 TCL1BO95988 128 aa3.23□□□□□ -1.89
HMGB1P42-201ENST00000532126 TRBV20-1A0A075B6N2 111 aa3.22□□□□□ -1.89
HMGB1P42-201ENST00000532126 TRBV7-7A0A0K0K1E9 115 aa3.22□□□□□ -1.89
HMGB1P42-201ENST00000532126 A8MUU9 505 aa3.22□□□□□ -1.89
HMGB1P42-201ENST00000532126 H3BQ85 93 aa3.22□□□□□ -1.89
HMGB1P42-201ENST00000532126 KRTAP13-3Q3SY46 172 aa3.22□□□□□ -1.89
HMGB1P42-201ENST00000532126 Q6JHZ5 121 aa3.22□□□□□ -1.89
HMGB1P42-201ENST00000532126 TEN1Q86WV5 123 aa3.22□□□□□ -1.89
HMGB1P42-201ENST00000532126 COX6CP09669 75 aa3.21□□□□□ -1.9
HMGB1P42-201ENST00000532126 CLEC2BQ92478 149 aa3.21□□□□□ -1.9
HMGB1P42-201ENST00000532126 FAM236AA0A1B0GUQ0 79 aa3.2□□□□□ -1.9
HMGB1P42-201ENST00000532126 FAM236BA0A1B0GV22 79 aa3.2□□□□□ -1.9
HMGB1P42-201ENST00000532126 DNAL4O96015 105 aa3.2□□□□□ -1.9
HMGB1P42-201ENST00000532126 TRACP01848 142 aa3.2□□□□□ -1.9
HMGB1P42-201ENST00000532126 IGFL1Q6UW32 110 aa3.2□□□□□ -1.9
HMGB1P42-201ENST00000532126 H3BPC8 53 aa3.19□□□□□ -1.9
HMGB1P42-201ENST00000532126 COX7CP15954 63 aa3.19□□□□□ -1.9
HMGB1P42-201ENST00000532126 BRK1Q8WUW1 75 aa3.19□□□□□ -1.9
HMGB1P42-201ENST00000532126 ORMDL1Q9P0S3 153 aa3.18□□□□□ -1.9
HMGB1P42-201ENST00000532126 MUC2Q02817 5179 aa3.18□□□□□ -1.9
HMGB1P42-201ENST00000532126 C9orf92A6NGG3 77 aa3.16□□□□□ -1.9
HMGB1P42-201ENST00000532126 H3BT86 120 aa3.16□□□□□ -1.9
HMGB1P42-201ENST00000532126 ATOX1O00244 68 aa3.16□□□□□ -1.9
HMGB1P42-201ENST00000532126 ASB16-AS1Q495Z4 193 aa3.16□□□□□ -1.9
HMGB1P42-201ENST00000532126 SERP1Q9Y6X1 66 aa3.16□□□□□ -1.9
HMGB1P42-201ENST00000532126 A0A087WSZ3 146 aa3.14□□□□□ -1.91
HMGB1P42-201ENST00000532126 ACYP1P07311 99 aa3.14□□□□□ -1.91
HMGB1P42-201ENST00000532126 MT3P25713 68 aa3.14□□□□□ -1.91
HMGB1P42-201ENST00000532126 C7orf65Q6ZTY9 151 aa3.14□□□□□ -1.91
HMGB1P42-201ENST00000532126 TRAV7A0A075B6U4 112 aa3.13□□□□□ -1.91
HMGB1P42-201ENST00000532126 A0A1W2PNM2 257 aa3.13□□□□□ -1.91
HMGB1P42-201ENST00000532126 BAALC-AS2P0C853 105 aa3.13□□□□□ -1.91
HMGB1P42-201ENST00000532126 ATXN8Q156A1 80 aa3.13□□□□□ -1.91
HMGB1P42-201ENST00000532126 TRBV7-4A0A0J9YYF1 115 aa3.12□□□□□ -1.91
HMGB1P42-201ENST00000532126 A0A1B0GU33 70 aa3.12□□□□□ -1.91
HMGB1P42-201ENST00000532126 RBM3P98179 157 aaKnown RBP3.12□□□□□ -1.91
HMGB1P42-201ENST00000532126 LCE1AQ5T7P2 110 aa3.12□□□□□ -1.91
HMGB1P42-201ENST00000532126 SPINT4Q6UDR6 99 aa3.12□□□□□ -1.91
HMGB1P42-201ENST00000532126 MUC17Q685J3 4493 aa3.11□□□□□ -1.91
HMGB1P42-201ENST00000532126 CCKP06307 115 aa3.11□□□□□ -1.91
HMGB1P42-201ENST00000532126 ATP5EP56381 51 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P42-201ENST00000532126 SERP2Q8N6R1 65 aa3.11□□□□□ -1.91
HMGB1P42-201ENST00000532126 C1orf64Q8NEQ6 169 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms