RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 PP632Q6XCG6 107 aa2.57□□□□□ -2
ECHDC1-222ENST00000531967 CENPEQ02224 2701 aa2.57□□□□□ -2
ECHDC1-222ENST00000531967 NAV2Q8IVL1 2488 aa2.57□□□□□ -2
ECHDC1-222ENST00000531967 FBN2P35556 2912 aa2.57□□□□□ -2
ECHDC1-222ENST00000531967 CSMD2Q7Z408 3487 aa2.56□□□□□ -2
ECHDC1-222ENST00000531967 LRRK2Q5S007 2527 aa2.56□□□□□ -2
ECHDC1-222ENST00000531967 FAM208BQ5VWN6 2430 aa2.56□□□□□ -2
ECHDC1-222ENST00000531967 POLQO75417 2590 aa2.56□□□□□ -2
ECHDC1-222ENST00000531967 PTPN13Q12923 2485 aa2.56□□□□□ -2
ECHDC1-222ENST00000531967 C6orf48Q9UBA6 75 aa2.55□□□□□ -2
ECHDC1-222ENST00000531967 Q6ZRX8 168 aa2.55□□□□□ -2
ECHDC1-222ENST00000531967 CRIPTQ9P021 101 aa2.55□□□□□ -2
ECHDC1-222ENST00000531967 WNK1Q9H4A3 2382 aa2.55□□□□□ -2
ECHDC1-222ENST00000531967 TLN2Q9Y4G6 2542 aa2.55□□□□□ -2
ECHDC1-222ENST00000531967 UNQ6190/PRO20217Q6UXQ8 127 aa2.55□□□□□ -2
ECHDC1-222ENST00000531967 PLAC4Q8WY50 150 aa2.55□□□□□ -2
ECHDC1-222ENST00000531967 EPG5Q9HCE0 2579 aa2.54□□□□□ -2
ECHDC1-222ENST00000531967 NBPF19A0A087WUL8 3843 aa2.54□□□□□ -2
ECHDC1-222ENST00000531967 SETXQ7Z333 2677 aaKnown RBP2.54□□□□□ -2
ECHDC1-222ENST00000531967 ZNF462Q96JM2 2506 aa2.54□□□□□ -2
ECHDC1-222ENST00000531967 PRO0255Q9UI72 69 aa2.54□□□□□ -2
ECHDC1-222ENST00000531967 ABCA12Q86UK0 2595 aa2.54□□□□□ -2
ECHDC1-222ENST00000531967 ITPR3Q14573 2671 aa2.54□□□□□ -2
ECHDC1-222ENST00000531967 APCP25054 2843 aa2.54□□□□□ -2
ECHDC1-222ENST00000531967 NF1P21359 2839 aa2.53□□□□□ -2
ECHDC1-222ENST00000531967 NOTCH3Q9UM47 2321 aa2.53□□□□□ -2
ECHDC1-222ENST00000531967 SPRR1AP35321 89 aa2.53□□□□□ -2
ECHDC1-222ENST00000531967 ZNF469Q96JG9 3925 aaPredicted RBP2.53□□□□□ -2
ECHDC1-222ENST00000531967 DEFB130BP0DP73 79 aa2.53□□□□□ -2.01
ECHDC1-222ENST00000531967 DEFB130AP0DP74 79 aa2.53□□□□□ -2.01
ECHDC1-222ENST00000531967 C2CD3Q4AC94 2353 aa2.53□□□□□ -2.01
ECHDC1-222ENST00000531967 JMJD1CQ15652 2540 aa2.52□□□□□ -2.01
ECHDC1-222ENST00000531967 USP24Q9UPU5 2620 aa2.52□□□□□ -2.01
ECHDC1-222ENST00000531967 FLNAP21333 2647 aaKnown RBP2.52□□□□□ -2.01
ECHDC1-222ENST00000531967 NIPBLQ6KC79 2804 aaeCLIP2.51□□□□□ -2.01
ECHDC1-222ENST00000531967 KRTAP1-5Q9BYS1 174 aa2.51□□□□□ -2.01
ECHDC1-222ENST00000531967 SONP18583 2426 aaKnown RBP2.51□□□□□ -2.01
ECHDC1-222ENST00000531967 CLPSL2Q6UWE3 100 aa2.51□□□□□ -2.01
ECHDC1-222ENST00000531967 ZFYVE26Q68DK2 2539 aa2.5□□□□□ -2.01
ECHDC1-222ENST00000531967 ALMS1Q8TCU4 4167 aa2.5□□□□□ -2.01
ECHDC1-222ENST00000531967 LELP1Q5T871 98 aa2.5□□□□□ -2.01
ECHDC1-222ENST00000531967 SETD2Q9BYW2 2564 aaPredicted RBP2.49□□□□□ -2.01
ECHDC1-222ENST00000531967 KRTAP12-2P59991 146 aa2.49□□□□□ -2.01
ECHDC1-222ENST00000531967 CCDC168Q8NDH2 2452 aa2.49□□□□□ -2.01
ECHDC1-222ENST00000531967 CUBNO60494 3623 aa2.49□□□□□ -2.01
ECHDC1-222ENST00000531967 KRTAP13-4Q3LI77 160 aa2.49□□□□□ -2.01
ECHDC1-222ENST00000531967 A0A096LPF7 62 aa2.48□□□□□ -2.01
ECHDC1-222ENST00000531967 SPART-AS1P0CW21 52 aa2.48□□□□□ -2.01
ECHDC1-222ENST00000531967 GCN1Q92616 2671 aaKnown RBP2.48□□□□□ -2.01
ECHDC1-222ENST00000531967 MMP24-AS1A0A0U1RRL7 71 aa2.48□□□□□ -2.01
ECHDC1-222ENST00000531967 H0YAA0 97 aa2.48□□□□□ -2.01
ECHDC1-222ENST00000531967 KRTAP10-6P60371 365 aaPredicted RBP2.48□□□□□ -2.01
ECHDC1-222ENST00000531967 DEFB135Q30KP9 77 aa2.48□□□□□ -2.01
ECHDC1-222ENST00000531967 PDZD2O15018 2839 aa2.47□□□□□ -2.01
ECHDC1-222ENST00000531967 MTORP42345 2549 aa2.47□□□□□ -2.01
ECHDC1-222ENST00000531967 UNC79Q9P2D8 2635 aa2.47□□□□□ -2.01
ECHDC1-222ENST00000531967 H3BNG1 76 aa2.46□□□□□ -2.02
ECHDC1-222ENST00000531967 ANK3Q12955 4377 aaKnown RBP2.46□□□□□ -2.02
ECHDC1-222ENST00000531967 HIVEP2P31629 2446 aa2.46□□□□□ -2.02
ECHDC1-222ENST00000531967 KRTAP10-3P60369 221 aa2.46□□□□□ -2.02
ECHDC1-222ENST00000531967 DEFB105AQ8NG35 78 aa2.46□□□□□ -2.02
ECHDC1-222ENST00000531967 TENM4Q6N022 2769 aa2.45□□□□□ -2.02
ECHDC1-222ENST00000531967 NBEAL2Q6ZNJ1 2754 aa2.45□□□□□ -2.02
ECHDC1-222ENST00000531967 SPRR1BP22528 89 aa2.45□□□□□ -2.02
ECHDC1-222ENST00000531967 ACANP16112 2415 aa2.45□□□□□ -2.02
ECHDC1-222ENST00000531967 ITPR2Q14571 2701 aa2.44□□□□□ -2.02
ECHDC1-222ENST00000531967 DEFB4AO15263 64 aa2.44□□□□□ -2.02
ECHDC1-222ENST00000531967 HTN3P15516 51 aa2.44□□□□□ -2.02
ECHDC1-222ENST00000531967 LCE3CQ5T5A8 94 aa2.44□□□□□ -2.02
ECHDC1-222ENST00000531967 MRPL34Q9BQ48 92 aaKnown RBP2.44□□□□□ -2.02
ECHDC1-222ENST00000531967 J3QKU1 62 aa2.44□□□□□ -2.02
ECHDC1-222ENST00000531967 KRTAP10-1P60331 282 aa2.44□□□□□ -2.02
ECHDC1-222ENST00000531967 VWFP04275 2813 aa2.43□□□□□ -2.02
ECHDC1-222ENST00000531967 BAHCC1Q9P281 2608 aa2.43□□□□□ -2.02
ECHDC1-222ENST00000531967 SPRR5A0A1B0GTR4 108 aa2.43□□□□□ -2.02
ECHDC1-222ENST00000531967 Q6ZSA8 131 aa2.42□□□□□ -2.02
ECHDC1-222ENST00000531967 NOTCH2Q04721 2471 aa2.42□□□□□ -2.02
ECHDC1-222ENST00000531967 RPL37P61927 97 aaKnown RBP2.42□□□□□ -2.02
ECHDC1-222ENST00000531967 LINC01556Q5JQF7 62 aa2.42□□□□□ -2.02
ECHDC1-222ENST00000531967 SMR3AQ99954 134 aa2.41□□□□□ -2.02
ECHDC1-222ENST00000531967 NSD1Q96L73 2696 aaPredicted RBP2.41□□□□□ -2.02
ECHDC1-222ENST00000531967 KRTAP13-3Q3SY46 172 aa2.41□□□□□ -2.02
ECHDC1-222ENST00000531967 KRTAP10-12P60413 245 aa2.4□□□□□ -2.02
ECHDC1-222ENST00000531967 HIVEP1P15822 2718 aa2.4□□□□□ -2.03
ECHDC1-222ENST00000531967 HELZ2Q9BYK8 2649 aaKnown RBP2.4□□□□□ -2.03
ECHDC1-222ENST00000531967 TEP1Q99973 2627 aaKnown RBP2.4□□□□□ -2.03
ECHDC1-222ENST00000531967 TENM1Q9UKZ4 2725 aa2.39□□□□□ -2.03
ECHDC1-222ENST00000531967 COX6B2Q6YFQ2 88 aa2.39□□□□□ -2.03
ECHDC1-222ENST00000531967 C10orf95Q9H7T3 257 aa2.39□□□□□ -2.03
ECHDC1-222ENST00000531967 FASNP49327 2511 aaKnown RBP2.39□□□□□ -2.03
ECHDC1-222ENST00000531967 H1FX-AS1Q4G0G2 97 aa2.39□□□□□ -2.03
ECHDC1-222ENST00000531967 OTOGQ6ZRI0 2925 aa2.38□□□□□ -2.03
ECHDC1-222ENST00000531967 ATRQ13535 2644 aa2.38□□□□□ -2.03
ECHDC1-222ENST00000531967 TRRAPQ9Y4A5 3859 aa2.38□□□□□ -2.03
ECHDC1-222ENST00000531967 TENM2Q9NT68 2774 aa2.37□□□□□ -2.03
ECHDC1-222ENST00000531967 ANK2Q01484 3957 aa2.36□□□□□ -2.03
ECHDC1-222ENST00000531967 UBE2DNLQ8IWF7 75 aa2.36□□□□□ -2.03
ECHDC1-222ENST00000531967 DNAH3Q8TD57 4116 aa2.34□□□□□ -2.03
ECHDC1-222ENST00000531967 PKD1L1Q8TDX9 2849 aa2.34□□□□□ -2.03
ECHDC1-222ENST00000531967 FLG2Q5D862 2391 aaPredicted RBP2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms