RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 IGKV4-1P06312 121 aa4.41□□□□□ -1.7
USF1-210ENST00000531842 SMIM6P0DI80 62 aa4.41□□□□□ -1.7
USF1-210ENST00000531842 NOTCH2NLQ7Z3S9 236 aa4.41□□□□□ -1.7
USF1-210ENST00000531842 LINC00472Q9H8W2 130 aa4.41□□□□□ -1.7
USF1-210ENST00000531842 RBM12B-AS1Q9P1G2 102 aa4.41□□□□□ -1.7
USF1-210ENST00000531842 DNAL4O96015 105 aa4.4□□□□□ -1.71
USF1-210ENST00000531842 COX6CP09669 75 aa4.4□□□□□ -1.71
USF1-210ENST00000531842 UBE2V1Q13404 147 aa4.4□□□□□ -1.71
USF1-210ENST00000531842 ANKRD29Q8N6D5 301 aa4.4□□□□□ -1.71
USF1-210ENST00000531842 NEBP20929 6669 aa4.4□□□□□ -1.71
USF1-210ENST00000531842 HRES1P13985 223 aa4.39□□□□□ -1.71
USF1-210ENST00000531842 DEFB116Q30KQ4 102 aa4.39□□□□□ -1.71
USF1-210ENST00000531842 CCKP06307 115 aa4.38□□□□□ -1.71
USF1-210ENST00000531842 SCGB1C2P0DMR2 95 aa4.38□□□□□ -1.71
USF1-210ENST00000531842 MUC12Q9UKN1 5478 aa4.37□□□□□ -1.71
USF1-210ENST00000531842 IGHV6-1A0A0B4J1U7 121 aa4.37□□□□□ -1.71
USF1-210ENST00000531842 H3BQ85 93 aa4.37□□□□□ -1.71
USF1-210ENST00000531842 BAALC-AS2P0C853 105 aa4.37□□□□□ -1.71
USF1-210ENST00000531842 MPLKIPQ8TAP9 179 aa4.37□□□□□ -1.71
USF1-210ENST00000531842 M0R143 59 aa4.35□□□□□ -1.71
USF1-210ENST00000531842 RBM3P98179 157 aaKnown RBP4.35□□□□□ -1.71
USF1-210ENST00000531842 LINC00846Q9NV44 126 aa4.35□□□□□ -1.71
USF1-210ENST00000531842 MTURNQ8N3F0 131 aa4.34□□□□□ -1.71
USF1-210ENST00000531842 Q8N9P0 234 aaPredicted RBP4.34□□□□□ -1.71
USF1-210ENST00000531842 Q6ZQT0 140 aa4.33□□□□□ -1.72
USF1-210ENST00000531842 VPS25Q9BRG1 176 aa4.33□□□□□ -1.72
USF1-210ENST00000531842 TAX1BP3O14907 124 aa4.32□□□□□ -1.72
USF1-210ENST00000531842 ATXN8Q156A1 80 aa4.32□□□□□ -1.72
USF1-210ENST00000531842 KRTAP20-1Q3LI63 56 aa4.31□□□□□ -1.72
USF1-210ENST00000531842 DSCR8Q96T75 97 aa4.31□□□□□ -1.72
USF1-210ENST00000531842 LOC110117498A0A087WWA1 95 aa4.3□□□□□ -1.72
USF1-210ENST00000531842 A0A1B0GVX0 72 aa4.3□□□□□ -1.72
USF1-210ENST00000531842 C9JAW5 83 aa4.3□□□□□ -1.72
USF1-210ENST00000531842 C8orf87E5RJ46 101 aa4.3□□□□□ -1.72
USF1-210ENST00000531842 TSTD3H0UI37 97 aa4.3□□□□□ -1.72
USF1-210ENST00000531842 BATFQ16520 125 aa4.3□□□□□ -1.72
USF1-210ENST00000531842 C9orf118A6NHY6 69 aa4.29□□□□□ -1.72
USF1-210ENST00000531842 LYRM7Q5U5X0 104 aa4.29□□□□□ -1.72
USF1-210ENST00000531842 C14orf132Q9NPU4 83 aa4.29□□□□□ -1.72
USF1-210ENST00000531842 SPINK7P58062 85 aa4.28□□□□□ -1.72
USF1-210ENST00000531842 ZCCHC13Q8WW36 166 aaKnown RBP4.28□□□□□ -1.72
USF1-210ENST00000531842 A0A1W2PPM0 123 aa4.27□□□□□ -1.73
USF1-210ENST00000531842 JMJD7-PLA2G4BH0Y9G9 81 aa4.27□□□□□ -1.73
USF1-210ENST00000531842 J3KT08 172 aa4.26□□□□□ -1.73
USF1-210ENST00000531842 NDUFB1O75438 58 aa4.26□□□□□ -1.73
USF1-210ENST00000531842 IGKV3D-7A0A0C4DH55 119 aa4.25□□□□□ -1.73
USF1-210ENST00000531842 SMCPP49901 116 aaPredicted RBP4.25□□□□□ -1.73
USF1-210ENST00000531842 A0A1B0GW54 56 aa4.23□□□□□ -1.73
USF1-210ENST00000531842 A8MWP4 228 aa4.23□□□□□ -1.73
USF1-210ENST00000531842 WFDC13Q8IUB5 93 aa4.23□□□□□ -1.73
USF1-210ENST00000531842 H3BT86 120 aa4.22□□□□□ -1.73
USF1-210ENST00000531842 PDE6GP18545 87 aa4.22□□□□□ -1.73
USF1-210ENST00000531842 C8orf17Q9NRJ1 99 aa4.22□□□□□ -1.73
USF1-210ENST00000531842 PRR15Q8IV56 129 aa4.21□□□□□ -1.74
USF1-210ENST00000531842 PRO0461Q9UI25 63 aa4.21□□□□□ -1.74
USF1-210ENST00000531842 MDN1Q9NU22 5596 aa4.21□□□□□ -1.74
USF1-210ENST00000531842 MMP24-AS1A0A0U1RRL7 71 aa4.19□□□□□ -1.74
USF1-210ENST00000531842 SPCS1Q9Y6A9 102 aa4.19□□□□□ -1.74
USF1-210ENST00000531842 KMT2DO14686 5537 aa4.18□□□□□ -1.74
USF1-210ENST00000531842 K7EQZ3 153 aa4.18□□□□□ -1.74
USF1-210ENST00000531842 NREPQ16612 68 aa4.18□□□□□ -1.74
USF1-210ENST00000531842 Q6ZVQ6 151 aa4.17□□□□□ -1.74
USF1-210ENST00000531842 KRTAP3-3Q9BYR6 98 aa4.16□□□□□ -1.74
USF1-210ENST00000531842 KRTAP3-2Q9BYR7 98 aa4.16□□□□□ -1.74
USF1-210ENST00000531842 A6NN06 94 aa4.15□□□□□ -1.75
USF1-210ENST00000531842 COL5A1-AS1Q5SY13 56 aa4.15□□□□□ -1.75
USF1-210ENST00000531842 K7EP34 96 aa4.14□□□□□ -1.75
USF1-210ENST00000531842 NDUFS5O43920 106 aa4.14□□□□□ -1.75
USF1-210ENST00000531842 H1FX-AS1Q4G0G2 97 aa4.14□□□□□ -1.75
USF1-210ENST00000531842 Q8N9L7 120 aa4.14□□□□□ -1.75
USF1-210ENST00000531842 TMEM254Q8TBM7 123 aa4.14□□□□□ -1.75
USF1-210ENST00000531842 MT1BP07438 61 aa4.13□□□□□ -1.75
USF1-210ENST00000531842 Q5W150 140 aa4.13□□□□□ -1.75
USF1-210ENST00000531842 MRPL34Q9BQ48 92 aaKnown RBP4.13□□□□□ -1.75
USF1-210ENST00000531842 IGKV2D-30A0A075B6S6 120 aa4.11□□□□□ -1.75
USF1-210ENST00000531842 hDV103S1A0JD37 113 aa4.11□□□□□ -1.75
USF1-210ENST00000531842 BPY2O14599 106 aa4.11□□□□□ -1.75
USF1-210ENST00000531842 IGKV2-30P06310 120 aa4.11□□□□□ -1.75
USF1-210ENST00000531842 KRTAP5-9P26371 169 aa4.11□□□□□ -1.75
USF1-210ENST00000531842 PCP4P48539 62 aa4.11□□□□□ -1.75
USF1-210ENST00000531842 PCP4L1A6NKN8 68 aa4.09□□□□□ -1.75
USF1-210ENST00000531842 KRTAP2-3P0C7H8 128 aa4.08□□□□□ -1.76
USF1-210ENST00000531842 KRTAP2-4Q9BYR9 128 aa4.08□□□□□ -1.76
USF1-210ENST00000531842 C7orf65Q6ZTY9 151 aa4.06□□□□□ -1.76
USF1-210ENST00000531842 KRTAP10-5P60370 271 aa4.05□□□□□ -1.76
USF1-210ENST00000531842 ETDBQ3ZM63 59 aa4.05□□□□□ -1.76
USF1-210ENST00000531842 CASC2Q6XLA1 102 aa4.05□□□□□ -1.76
USF1-210ENST00000531842 FAM236AA0A1B0GUQ0 79 aa4.04□□□□□ -1.76
USF1-210ENST00000531842 FAM236BA0A1B0GV22 79 aa4.04□□□□□ -1.76
USF1-210ENST00000531842 F8W1H4 67 aa4.04□□□□□ -1.76
USF1-210ENST00000531842 HCG22E2RYF7 251 aa4.03□□□□□ -1.76
USF1-210ENST00000531842 C4orf26Q17RF5 130 aa4.03□□□□□ -1.76
USF1-210ENST00000531842 C5orf47Q569G3 176 aa4.03□□□□□ -1.76
USF1-210ENST00000531842 Q5VV11 94 aa4.02□□□□□ -1.77
USF1-210ENST00000531842 GTF2H5Q6ZYL4 71 aa4.02□□□□□ -1.77
USF1-210ENST00000531842 KRTAP3-1Q9BYR8 98 aa4.02□□□□□ -1.77
USF1-210ENST00000531842 UBL5Q9BZL1 73 aa4.02□□□□□ -1.77
USF1-210ENST00000531842 KRTAP19-8Q3LI54 63 aa4□□□□□ -1.77
USF1-210ENST00000531842 SPRR2EP22531 72 aa3.99□□□□□ -1.77
USF1-210ENST00000531842 SPRR2BP35325 72 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms