RNA–Protein interactions for RNA: ENST00000531741.1

VPS26B-206, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-206ENST00000531741 NOTCH2NLQ7Z3S9 236 aa9.89□□□□□ -0.83
VPS26B-206ENST00000531741 BRK1Q8WUW1 75 aa9.89□□□□□ -0.83
VPS26B-206ENST00000531741 DNAH6Q9C0G6 4158 aa9.88□□□□□ -0.83
VPS26B-206ENST00000531741 KRTAP10-2P60368 255 aa9.88□□□□□ -0.83
VPS26B-206ENST00000531741 Q6ZSA8 131 aa9.87□□□□□ -0.83
VPS26B-206ENST00000531741 C1orf195Q5TG92 126 aa9.86□□□□□ -0.83
VPS26B-206ENST00000531741 TGP01266 2768 aa9.86□□□□□ -0.83
VPS26B-206ENST00000531741 C8orf87E5RJ46 101 aa9.84□□□□□ -0.83
VPS26B-206ENST00000531741 PCOTHQ58A44 107 aa9.83□□□□□ -0.84
VPS26B-206ENST00000531741 SPINK6Q6UWN8 80 aa9.83□□□□□ -0.84
VPS26B-206ENST00000531741 COA5Q86WW8 74 aa9.83□□□□□ -0.84
VPS26B-206ENST00000531741 Q8N9P0 234 aaPredicted RBP9.81□□□□□ -0.84
VPS26B-206ENST00000531741 LIMD2Q9BT23 127 aa9.81□□□□□ -0.84
VPS26B-206ENST00000531741 LOC101927531A0A1B0GV80 90 aa9.8□□□□□ -0.84
VPS26B-206ENST00000531741 PSPHP1O15172 72 aa9.8□□□□□ -0.84
VPS26B-206ENST00000531741 KRTAP13-3Q3SY46 172 aa9.8□□□□□ -0.84
VPS26B-206ENST00000531741 ALMS1Q8TCU4 4167 aa9.78□□□□□ -0.84
VPS26B-206ENST00000531741 KRTAP10-1P60331 282 aa9.77□□□□□ -0.85
VPS26B-206ENST00000531741 KRTAP13-2Q52LG2 175 aa9.76□□□□□ -0.85
VPS26B-206ENST00000531741 DNAH11Q96DT5 4516 aa9.76□□□□□ -0.85
VPS26B-206ENST00000531741 DNAH5Q8TE73 4624 aa9.76□□□□□ -0.85
VPS26B-206ENST00000531741 A8MUN3 132 aa9.76□□□□□ -0.85
VPS26B-206ENST00000531741 DNHD1Q96M86 4753 aa9.75□□□□□ -0.85
VPS26B-206ENST00000531741 Q5W150 140 aa9.75□□□□□ -0.85
VPS26B-206ENST00000531741 Q5VV11 94 aa9.74□□□□□ -0.85
VPS26B-206ENST00000531741 LINC00313P59037 77 aa9.71□□□□□ -0.86
VPS26B-206ENST00000531741 KRTAP1-4P0C5Y4 121 aa9.7□□□□□ -0.86
VPS26B-206ENST00000531741 HRES1P13985 223 aa9.68□□□□□ -0.86
VPS26B-206ENST00000531741 FAM229AH3BQW9 127 aa9.67□□□□□ -0.86
VPS26B-206ENST00000531741 PRR15LQ9BU68 103 aa9.66□□□□□ -0.86
VPS26B-206ENST00000531741 PKD1P98161 4303 aa9.65□□□□□ -0.86
VPS26B-206ENST00000531741 Q75L30 129 aa9.64□□□□□ -0.87
VPS26B-206ENST00000531741 LINC01558Q9Y6Z2 57 aa9.63□□□□□ -0.87
VPS26B-206ENST00000531741 KRTAP16-1A8MUX0 517 aa9.61□□□□□ -0.87
VPS26B-206ENST00000531741 CHKB-CPT1BH3BT56 60 aa9.61□□□□□ -0.87
VPS26B-206ENST00000531741 SEC61GP60059 68 aa9.61□□□□□ -0.87
VPS26B-206ENST00000531741 FAT2Q9NYQ8 4349 aa9.61□□□□□ -0.87
VPS26B-206ENST00000531741 KRTAP21-3Q3LHN1 58 aa9.6□□□□□ -0.87
VPS26B-206ENST00000531741 LRP1BQ9NZR2 4599 aa9.6□□□□□ -0.87
VPS26B-206ENST00000531741 IGKV2-30P06310 120 aa9.57□□□□□ -0.88
VPS26B-206ENST00000531741 ACYP2P14621 99 aa9.57□□□□□ -0.88
VPS26B-206ENST00000531741 SPAG11AQ6PDA7 123 aa9.57□□□□□ -0.88
VPS26B-206ENST00000531741 DMAC1Q96GE9 116 aa9.56□□□□□ -0.88
VPS26B-206ENST00000531741 SPINK1P00995 79 aa9.55□□□□□ -0.88
VPS26B-206ENST00000531741 PLA2G1BP04054 148 aaKnown RBP9.55□□□□□ -0.88
VPS26B-206ENST00000531741 C4orf48Q5BLP8 95 aa9.54□□□□□ -0.88
VPS26B-206ENST00000531741 TYMSOSQ8TAI1 123 aa9.54□□□□□ -0.88
VPS26B-206ENST00000531741 HYDINQ4G0P3 5121 aa9.52□□□□□ -0.88
VPS26B-206ENST00000531741 RPS29P62273 56 aaKnown RBP9.5□□□□□ -0.89
VPS26B-206ENST00000531741 A6NED7 52 aa9.49□□□□□ -0.89
VPS26B-206ENST00000531741 VPS13BQ7Z7G8 4022 aa9.49□□□□□ -0.89
VPS26B-206ENST00000531741 PRR26Q8N8Z3 221 aa9.47□□□□□ -0.89
VPS26B-206ENST00000531741 A8MU10 97 aa9.47□□□□□ -0.89
VPS26B-206ENST00000531741 RETNLBQ9BQ08 111 aa9.47□□□□□ -0.89
VPS26B-206ENST00000531741 LCA10Q71F78 164 aa9.46□□□□□ -0.89
VPS26B-206ENST00000531741 CDC42SE1Q9NRR8 79 aa9.44□□□□□ -0.9
VPS26B-206ENST00000531741 LINC00304Q8N9R0 145 aa9.42□□□□□ -0.9
VPS26B-206ENST00000531741 ATP11AUNQ6ZP68 121 aa9.41□□□□□ -0.9
VPS26B-206ENST00000531741 IGKV2D-30A0A075B6S6 120 aa9.37□□□□□ -0.91
VPS26B-206ENST00000531741 PMAIP1Q13794 54 aa9.37□□□□□ -0.91
VPS26B-206ENST00000531741 SPINK7P58062 85 aa9.36□□□□□ -0.91
VPS26B-206ENST00000531741 A0A1B0GVY2 172 aa9.33□□□□□ -0.92
VPS26B-206ENST00000531741 SACSQ9NZJ4 4579 aa9.33□□□□□ -0.92
VPS26B-206ENST00000531741 SPTSSBQ8NFR3 76 aa9.31□□□□□ -0.92
VPS26B-206ENST00000531741 C7orf65Q6ZTY9 151 aa9.3□□□□□ -0.92
VPS26B-206ENST00000531741 KRTAP10-4P60372 401 aaPredicted RBP9.29□□□□□ -0.92
VPS26B-206ENST00000531741 PKHD1P08F94 4074 aa9.29□□□□□ -0.92
VPS26B-206ENST00000531741 SMR3BP02814 79 aaPredicted RBP9.27□□□□□ -0.93
VPS26B-206ENST00000531741 A0A1B0GU69 56 aa9.25□□□□□ -0.93
VPS26B-206ENST00000531741 A6NN06 94 aa9.25□□□□□ -0.93
VPS26B-206ENST00000531741 C20orf166-AS1Q96NR2 134 aa9.24□□□□□ -0.93
VPS26B-206ENST00000531741 A8MUU9 505 aa9.22□□□□□ -0.93
VPS26B-206ENST00000531741 DYNC1H1Q14204 4646 aaKnown RBP9.22□□□□□ -0.93
VPS26B-206ENST00000531741 KTN1-AS1Q86SY8 53 aa9.19□□□□□ -0.94
VPS26B-206ENST00000531741 PKHD1L1Q86WI1 4243 aa9.17□□□□□ -0.94
VPS26B-206ENST00000531741 APOBP04114 4563 aaKnown RBP9.14□□□□□ -0.95
VPS26B-206ENST00000531741 SPATA8Q6RVD6 105 aa9.14□□□□□ -0.95
VPS26B-206ENST00000531741 C9orf92A6NGG3 77 aa9.12□□□□□ -0.95
VPS26B-206ENST00000531741 Q8N1X5 172 aa9.12□□□□□ -0.95
VPS26B-206ENST00000531741 UQCR11O14957 56 aa9.11□□□□□ -0.95
VPS26B-206ENST00000531741 FAT1Q14517 4588 aa9.07□□□□□ -0.96
VPS26B-206ENST00000531741 MIR22HGQ0VDD5 57 aa9.05□□□□□ -0.96
VPS26B-206ENST00000531741 KRTAP3-1Q9BYR8 98 aa9□□□□□ -0.97
VPS26B-206ENST00000531741 RYR2Q92736 4967 aa8.98□□□□□ -0.97
VPS26B-206ENST00000531741 FLG2Q5D862 2391 aaPredicted RBP8.98□□□□□ -0.97
VPS26B-206ENST00000531741 KRTAP10-8P60410 259 aa8.95□□□□□ -0.98
VPS26B-206ENST00000531741 COX6B2Q6YFQ2 88 aa8.9□□□□□ -0.98
VPS26B-206ENST00000531741 RBM12B-AS1Q9P1G2 102 aa8.89□□□□□ -0.99
VPS26B-206ENST00000531741 Q5VSD8 79 aa8.85□□□□□ -0.99
VPS26B-206ENST00000531741 TNXBP22105 4242 aa8.82□□□□□ -1
VPS26B-206ENST00000531741 KMT2CQ8NEZ4 4911 aaKnown RBP8.81□□□□□ -1
VPS26B-206ENST00000531741 FAT3Q8TDW7 4589 aa8.81□□□□□ -1
VPS26B-206ENST00000531741 RPL37P61927 97 aaKnown RBP8.8□□□□□ -1
VPS26B-206ENST00000531741 H0YAA0 97 aa8.79□□□□□ -1
VPS26B-206ENST00000531741 A0A1B0GU33 70 aa8.78□□□□□ -1
VPS26B-206ENST00000531741 H1FX-AS1Q4G0G2 97 aa8.76□□□□□ -1.01
VPS26B-206ENST00000531741 XP32Q5T750 250 aa8.74□□□□□ -1.01
VPS26B-206ENST00000531741 HSPG2P98160 4391 aa8.74□□□□□ -1.01
VPS26B-206ENST00000531741 LRP1Q07954 4544 aaKnown RBP8.73□□□□□ -1.01
VPS26B-206ENST00000531741 PRAC1Q96KF2 57 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 136 ms