RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 DEFB116Q30KQ4 102 aa11.43□□□□□ -0.58
TRAPPC4-210ENST00000531290 PDE6GP18545 87 aa11.42□□□□□ -0.58
TRAPPC4-210ENST00000531290 LINC00472Q9H8W2 130 aa11.42□□□□□ -0.58
TRAPPC4-210ENST00000531290 LINC00313P59037 77 aa11.41□□□□□ -0.58
TRAPPC4-210ENST00000531290 LOC110117498A0A087WWA1 95 aa11.37□□□□□ -0.59
TRAPPC4-210ENST00000531290 A0A1W2PPM0 123 aa11.37□□□□□ -0.59
TRAPPC4-210ENST00000531290 TAX1BP3O14907 124 aa11.37□□□□□ -0.59
TRAPPC4-210ENST00000531290 A0A1B0GW54 56 aa11.36□□□□□ -0.59
TRAPPC4-210ENST00000531290 Q6ZQT0 140 aa11.36□□□□□ -0.59
TRAPPC4-210ENST00000531290 J3KT08 172 aa11.35□□□□□ -0.59
TRAPPC4-210ENST00000531290 IGHV6-1A0A0B4J1U7 121 aa11.34□□□□□ -0.59
TRAPPC4-210ENST00000531290 C14orf132Q9NPU4 83 aa11.34□□□□□ -0.59
TRAPPC4-210ENST00000531290 H3BT86 120 aa11.31□□□□□ -0.6
TRAPPC4-210ENST00000531290 A0A1B0GVX0 72 aa11.28□□□□□ -0.6
TRAPPC4-210ENST00000531290 KRTAP16-1A8MUX0 517 aa11.28□□□□□ -0.6
TRAPPC4-210ENST00000531290 C8orf87E5RJ46 101 aa11.28□□□□□ -0.6
TRAPPC4-210ENST00000531290 NDUFB1O75438 58 aa11.28□□□□□ -0.6
TRAPPC4-210ENST00000531290 FAM236DA0A1B0GTK5 79 aa11.27□□□□□ -0.61
TRAPPC4-210ENST00000531290 FAM236CP0DP71 79 aa11.27□□□□□ -0.61
TRAPPC4-210ENST00000531290 COL5A1-AS1Q5SY13 56 aa11.27□□□□□ -0.61
TRAPPC4-210ENST00000531290 SPCS1Q9Y6A9 102 aa11.26□□□□□ -0.61
TRAPPC4-210ENST00000531290 NOTCH2NLQ7Z3S9 236 aa11.25□□□□□ -0.61
TRAPPC4-210ENST00000531290 KRTAP9-8Q9BYQ0 159 aa11.25□□□□□ -0.61
TRAPPC4-210ENST00000531290 MTURNQ8N3F0 131 aa11.24□□□□□ -0.61
TRAPPC4-210ENST00000531290 NREPQ16612 68 aa11.22□□□□□ -0.61
TRAPPC4-210ENST00000531290 RBM12B-AS1Q9P1G2 102 aa11.21□□□□□ -0.61
TRAPPC4-210ENST00000531290 A8MWP4 228 aa11.17□□□□□ -0.62
TRAPPC4-210ENST00000531290 HRES1P13985 223 aa11.14□□□□□ -0.63
TRAPPC4-210ENST00000531290 USH2AO75445 5202 aa11.13□□□□□ -0.63
TRAPPC4-210ENST00000531290 MPLKIPQ8TAP9 179 aa11.13□□□□□ -0.63
TRAPPC4-210ENST00000531290 PCP4L1A6NKN8 68 aa11.11□□□□□ -0.63
TRAPPC4-210ENST00000531290 IGKV3D-7A0A0C4DH55 119 aa11.09□□□□□ -0.63
TRAPPC4-210ENST00000531290 C8orf17Q9NRJ1 99 aa11.09□□□□□ -0.63
TRAPPC4-210ENST00000531290 K7EP34 96 aa11.07□□□□□ -0.64
TRAPPC4-210ENST00000531290 MT2AP02795 61 aa11.07□□□□□ -0.64
TRAPPC4-210ENST00000531290 PRR15Q8IV56 129 aa11.06□□□□□ -0.64
TRAPPC4-210ENST00000531290 SSPOA2VEC9 5147 aa11.05□□□□□ -0.64
TRAPPC4-210ENST00000531290 SMCPP49901 116 aaPredicted RBP11.04□□□□□ -0.64
TRAPPC4-210ENST00000531290 GTF2H5Q6ZYL4 71 aa11.04□□□□□ -0.64
TRAPPC4-210ENST00000531290 ZCCHC13Q8WW36 166 aaKnown RBP11.03□□□□□ -0.64
TRAPPC4-210ENST00000531290 BPY2O14599 106 aa11.02□□□□□ -0.65
TRAPPC4-210ENST00000531290 Q6ZVQ6 151 aa11.02□□□□□ -0.65
TRAPPC4-210ENST00000531290 Q8N9P0 234 aaPredicted RBP11.02□□□□□ -0.65
TRAPPC4-210ENST00000531290 SPINK7P58062 85 aa10.99□□□□□ -0.65
TRAPPC4-210ENST00000531290 KRTAP10-10P60014 251 aa10.99□□□□□ -0.65
TRAPPC4-210ENST00000531290 MT1FP04733 61 aa10.98□□□□□ -0.65
TRAPPC4-210ENST00000531290 PRO0461Q9UI25 63 aa10.98□□□□□ -0.65
TRAPPC4-210ENST00000531290 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.95□□□□□ -0.66
TRAPPC4-210ENST00000531290 K7EQZ3 153 aa10.95□□□□□ -0.66
TRAPPC4-210ENST00000531290 TMEM254Q8TBM7 123 aa10.94□□□□□ -0.66
TRAPPC4-210ENST00000531290 MRPL34Q9BQ48 92 aaKnown RBP10.94□□□□□ -0.66
TRAPPC4-210ENST00000531290 F8W1H4 67 aa10.93□□□□□ -0.66
TRAPPC4-210ENST00000531290 UBL5Q9BZL1 73 aa10.93□□□□□ -0.66
TRAPPC4-210ENST00000531290 MMP24-AS1A0A0U1RRL7 71 aa10.92□□□□□ -0.66
TRAPPC4-210ENST00000531290 hDV103S1A0JD37 113 aa10.92□□□□□ -0.66
TRAPPC4-210ENST00000531290 KRTAP9-3Q9BYQ3 159 aa10.91□□□□□ -0.66
TRAPPC4-210ENST00000531290 NDUFS5O43920 106 aa10.9□□□□□ -0.66
TRAPPC4-210ENST00000531290 LCE2BO14633 110 aa10.89□□□□□ -0.67
TRAPPC4-210ENST00000531290 KRTAP9-7A8MTY7 169 aa10.88□□□□□ -0.67
TRAPPC4-210ENST00000531290 LINC00846Q9NV44 126 aa10.86□□□□□ -0.67
TRAPPC4-210ENST00000531290 WFDC13Q8IUB5 93 aa10.84□□□□□ -0.67
TRAPPC4-210ENST00000531290 FCGBPQ9Y6R7 5405 aaPredicted RBP10.84□□□□□ -0.67
TRAPPC4-210ENST00000531290 ETDBQ3ZM63 59 aa10.82□□□□□ -0.68
TRAPPC4-210ENST00000531290 CASC2Q6XLA1 102 aa10.82□□□□□ -0.68
TRAPPC4-210ENST00000531290 KRTAP19-1Q8IUB9 90 aa10.82□□□□□ -0.68
TRAPPC4-210ENST00000531290 Q8N9L7 120 aa10.82□□□□□ -0.68
TRAPPC4-210ENST00000531290 HCG22E2RYF7 251 aa10.71□□□□□ -0.69
TRAPPC4-210ENST00000531290 CXCL6P80162 114 aa10.67□□□□□ -0.7
TRAPPC4-210ENST00000531290 IGKV2D-30A0A075B6S6 120 aa10.65□□□□□ -0.7
TRAPPC4-210ENST00000531290 IGKV2-30P06310 120 aa10.65□□□□□ -0.7
TRAPPC4-210ENST00000531290 ACYP1P07311 99 aa10.63□□□□□ -0.71
TRAPPC4-210ENST00000531290 H1FX-AS1Q4G0G2 97 aa10.63□□□□□ -0.71
TRAPPC4-210ENST00000531290 Q5W150 140 aa10.63□□□□□ -0.71
TRAPPC4-210ENST00000531290 C7orf65Q6ZTY9 151 aa10.63□□□□□ -0.71
TRAPPC4-210ENST00000531290 MACF1Q9UPN3 7388 aaKnown RBP10.57□□□□□ -0.72
TRAPPC4-210ENST00000531290 KRTAP19-6Q3LI70 58 aa10.56□□□□□ -0.72
TRAPPC4-210ENST00000531290 TP53AIP1Q9HCN2 124 aa10.55□□□□□ -0.72
TRAPPC4-210ENST00000531290 FAM240AA0A1B0GVK7 77 aa10.53□□□□□ -0.72
TRAPPC4-210ENST00000531290 ATP5EP2Q5VTU8 51 aa10.48□□□□□ -0.73
TRAPPC4-210ENST00000531290 SYNE2Q8WXH0 6885 aaKnown RBP10.47□□□□□ -0.73
TRAPPC4-210ENST00000531290 A0A1B0GV90 55 aa10.46□□□□□ -0.73
TRAPPC4-210ENST00000531290 HIST1H4AP62805 103 aaKnown RBP10.42□□□□□ -0.74
TRAPPC4-210ENST00000531290 C4orf26Q17RF5 130 aa10.42□□□□□ -0.74
TRAPPC4-210ENST00000531290 LINC00643Q86TS7 51 aa10.35□□□□□ -0.75
TRAPPC4-210ENST00000531290 J3QR89 54 aa10.3□□□□□ -0.76
TRAPPC4-210ENST00000531290 TRAV22A0A0B4J277 110 aa10.29□□□□□ -0.76
TRAPPC4-210ENST00000531290 C1orf64Q8NEQ6 169 aa10.28□□□□□ -0.76
TRAPPC4-210ENST00000531290 C5orf47Q569G3 176 aa10.27□□□□□ -0.77
TRAPPC4-210ENST00000531290 UQCRQO14949 82 aa10.25□□□□□ -0.77
TRAPPC4-210ENST00000531290 LOC101927531A0A1B0GV80 90 aa10.24□□□□□ -0.77
TRAPPC4-210ENST00000531290 CYP4F30PQ9H0H9 118 aa10.24□□□□□ -0.77
TRAPPC4-210ENST00000531290 FAM236AA0A1B0GUQ0 79 aa10.23□□□□□ -0.77
TRAPPC4-210ENST00000531290 FAM236BA0A1B0GV22 79 aa10.23□□□□□ -0.77
TRAPPC4-210ENST00000531290 A0A087WVE0 104 aa10.21□□□□□ -0.77
TRAPPC4-210ENST00000531290 ATOX1O00244 68 aa10.2□□□□□ -0.78
TRAPPC4-210ENST00000531290 KRTAP6-3Q3LI67 103 aa10.19□□□□□ -0.78
TRAPPC4-210ENST00000531290 S4R3F8 94 aa10.19□□□□□ -0.78
TRAPPC4-210ENST00000531290 KRTAP3-1Q9BYR8 98 aa10.18□□□□□ -0.78
TRAPPC4-210ENST00000531290 H0Y9P7 68 aa10.17□□□□□ -0.78
TRAPPC4-210ENST00000531290 CSAG1Q6PB30 78 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 121.2 ms