RNA–Protein interactions for RNA: ENST00000531243.2

PABPC4-225, Transcript of poly(A) binding protein cytoplasmic 4, human

TSL 4

Gene PABPC4, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC4-225	ENST00000531243	DEFB116	Q30KQ4	102 aa		11.7	□□□□□ -0.54
PABPC4-225	ENST00000531243	XP32	Q5T750	250 aa		11.68	□□□□□ -0.54
PABPC4-225	ENST00000531243	LRP2	P98164	4655 aa		11.67	□□□□□ -0.54
PABPC4-225	ENST00000531243	NDUFB1	O75438	58 aa		11.65	□□□□□ -0.54
PABPC4-225	ENST00000531243	SEC61B	P60468	96 aa	Known RBP	11.62	□□□□□ -0.55
PABPC4-225	ENST00000531243	LINC00313	P59037	77 aa		11.61	□□□□□ -0.55
PABPC4-225	ENST00000531243	UBL5	Q9BZL1	73 aa		11.61	□□□□□ -0.55
PABPC4-225	ENST00000531243	IGHV6-1	A0A0B4J1U7	121 aa		11.59	□□□□□ -0.55
PABPC4-225	ENST00000531243		A0A1B0GVX0	72 aa		11.58	□□□□□ -0.56
PABPC4-225	ENST00000531243	C8orf87	E5RJ46	101 aa		11.58	□□□□□ -0.56
PABPC4-225	ENST00000531243		Q6ZVQ6	151 aa		11.57	□□□□□ -0.56
PABPC4-225	ENST00000531243		A8MWP4	228 aa		11.56	□□□□□ -0.56
PABPC4-225	ENST00000531243	DSCR10	P59022	87 aa		11.56	□□□□□ -0.56
PABPC4-225	ENST00000531243	BPY2	O14599	106 aa		11.55	□□□□□ -0.56
PABPC4-225	ENST00000531243	LINC00846	Q9NV44	126 aa		11.54	□□□□□ -0.56
PABPC4-225	ENST00000531243	ACYP1	P07311	99 aa		11.53	□□□□□ -0.56
PABPC4-225	ENST00000531243	RPL37	P61927	97 aa	Known RBP	11.53	□□□□□ -0.56
PABPC4-225	ENST00000531243	UBR4	Q5T4S7	5183 aa		11.5	□□□□□ -0.57
PABPC4-225	ENST00000531243		Q75L30	129 aa		11.5	□□□□□ -0.57
PABPC4-225	ENST00000531243	PRR15	Q8IV56	129 aa		11.48	□□□□□ -0.57
PABPC4-225	ENST00000531243	IGKV3D-7	A0A0C4DH55	119 aa		11.47	□□□□□ -0.57
PABPC4-225	ENST00000531243	FAM240A	A0A1B0GVK7	77 aa		11.47	□□□□□ -0.57
PABPC4-225	ENST00000531243	C20orf166-AS1	Q96NR2	134 aa		11.46	□□□□□ -0.57
PABPC4-225	ENST00000531243	ATP11AUN	Q6ZP68	121 aa		11.45	□□□□□ -0.58
PABPC4-225	ENST00000531243	C8orf17	Q9NRJ1	99 aa		11.44	□□□□□ -0.58
PABPC4-225	ENST00000531243		A8MUU9	505 aa		11.43	□□□□□ -0.58
PABPC4-225	ENST00000531243	PCOTH	Q58A44	107 aa		11.43	□□□□□ -0.58
PABPC4-225	ENST00000531243	NOTCH2NL	Q7Z3S9	236 aa		11.43	□□□□□ -0.58
PABPC4-225	ENST00000531243	KRTAP16-1	A8MUX0	517 aa		11.41	□□□□□ -0.58
PABPC4-225	ENST00000531243		J3QR89	54 aa		11.41	□□□□□ -0.58
PABPC4-225	ENST00000531243		K7EQZ3	153 aa		11.41	□□□□□ -0.58
PABPC4-225	ENST00000531243	MUC17	Q685J3	4493 aa		11.38	□□□□□ -0.59
PABPC4-225	ENST00000531243	CXCL6	P80162	114 aa		11.37	□□□□□ -0.59
PABPC4-225	ENST00000531243	MMP24-AS1	A0A0U1RRL7	71 aa		11.33	□□□□□ -0.6
PABPC4-225	ENST00000531243	TMEM254	Q8TBM7	123 aa		11.33	□□□□□ -0.6
PABPC4-225	ENST00000531243	hDV103S1	A0JD37	113 aa		11.32	□□□□□ -0.6
PABPC4-225	ENST00000531243		A0A0U1RQV1	116 aa		11.31	□□□□□ -0.6
PABPC4-225	ENST00000531243		Q8N9L7	120 aa		11.31	□□□□□ -0.6
PABPC4-225	ENST00000531243	MRPL34	Q9BQ48	92 aa	Known RBP	11.31	□□□□□ -0.6
PABPC4-225	ENST00000531243	ATP5EP2	Q5VTU8	51 aa		11.3	□□□□□ -0.6
PABPC4-225	ENST00000531243		Q8N9P0	234 aa	Predicted RBP	11.3	□□□□□ -0.6
PABPC4-225	ENST00000531243	CASC2	Q6XLA1	102 aa		11.26	□□□□□ -0.61
PABPC4-225	ENST00000531243	RNF213	Q63HN8	5207 aa		11.25	□□□□□ -0.61
PABPC4-225	ENST00000531243	WFDC13	Q8IUB5	93 aa		11.24	□□□□□ -0.61
PABPC4-225	ENST00000531243	HCG22	E2RYF7	251 aa		11.23	□□□□□ -0.61
PABPC4-225	ENST00000531243	NDUFS5	O43920	106 aa		11.23	□□□□□ -0.61
PABPC4-225	ENST00000531243	LINC00643	Q86TS7	51 aa		11.23	□□□□□ -0.61
PABPC4-225	ENST00000531243	KRTAP4-1	Q9BYQ7	146 aa		11.22	□□□□□ -0.61
PABPC4-225	ENST00000531243	ZCCHC13	Q8WW36	166 aa	Known RBP	11.2	□□□□□ -0.62
PABPC4-225	ENST00000531243		K7ERU9	68 aa		11.18	□□□□□ -0.62
PABPC4-225	ENST00000531243	HIST1H4A	P62805	103 aa	Known RBP	11.14	□□□□□ -0.63
PABPC4-225	ENST00000531243	MUC2	Q02817	5179 aa		11.13	□□□□□ -0.63
PABPC4-225	ENST00000531243	TP53AIP1	Q9HCN2	124 aa		11.05	□□□□□ -0.64
PABPC4-225	ENST00000531243	SPINK7	P58062	85 aa		10.99	□□□□□ -0.65
PABPC4-225	ENST00000531243	COX6B2	Q6YFQ2	88 aa		10.98	□□□□□ -0.65
PABPC4-225	ENST00000531243		A0A087WVE0	104 aa		10.95	□□□□□ -0.66
PABPC4-225	ENST00000531243		Q5W150	140 aa		10.94	□□□□□ -0.66
PABPC4-225	ENST00000531243	RBM12B-AS1	Q9P1G2	102 aa		10.94	□□□□□ -0.66
PABPC4-225	ENST00000531243	IMUP	Q9GZP8	106 aa		10.91	□□□□□ -0.66
PABPC4-225	ENST00000531243	C7orf65	Q6ZTY9	151 aa		10.9	□□□□□ -0.66
PABPC4-225	ENST00000531243	IGKV2D-30	A0A075B6S6	120 aa		10.88	□□□□□ -0.67
PABPC4-225	ENST00000531243	IGKV2-30	P06310	120 aa		10.88	□□□□□ -0.67
PABPC4-225	ENST00000531243	HRES1	P13985	223 aa		10.88	□□□□□ -0.67
PABPC4-225	ENST00000531243	FAM236D	A0A1B0GTK5	79 aa		10.87	□□□□□ -0.67
PABPC4-225	ENST00000531243	FAM236C	P0DP71	79 aa		10.87	□□□□□ -0.67
PABPC4-225	ENST00000531243	KRTAP19-2	Q3LHN2	52 aa		10.87	□□□□□ -0.67
PABPC4-225	ENST00000531243	UQCRQ	O14949	82 aa		10.85	□□□□□ -0.67
PABPC4-225	ENST00000531243	TRAV22	A0A0B4J277	110 aa		10.82	□□□□□ -0.68
PABPC4-225	ENST00000531243	MT-ATP8	P03928	68 aa		10.82	□□□□□ -0.68
PABPC4-225	ENST00000531243	MPLKIP	Q8TAP9	179 aa		10.82	□□□□□ -0.68
PABPC4-225	ENST00000531243	SCGB1A1	P11684	91 aa		10.81	□□□□□ -0.68
PABPC4-225	ENST00000531243	KRTAP4-8	Q9BYQ9	185 aa		10.81	□□□□□ -0.68
PABPC4-225	ENST00000531243	FAT4	Q6V0I7	4981 aa		10.8	□□□□□ -0.68
PABPC4-225	ENST00000531243	ATOX1	O00244	68 aa		10.77	□□□□□ -0.69
PABPC4-225	ENST00000531243	LOC101927531	A0A1B0GV80	90 aa		10.73	□□□□□ -0.69
PABPC4-225	ENST00000531243		H0Y9P7	68 aa		10.72	□□□□□ -0.69
PABPC4-225	ENST00000531243	MT1H	P80294	61 aa		10.71	□□□□□ -0.69
PABPC4-225	ENST00000531243	OCR1	Q9BZK8	76 aa		10.71	□□□□□ -0.69
PABPC4-225	ENST00000531243		M0R2T5	61 aa		10.69	□□□□□ -0.7
PABPC4-225	ENST00000531243	MP68	P56378	58 aa		10.69	□□□□□ -0.7
PABPC4-225	ENST00000531243	C5orf47	Q569G3	176 aa		10.67	□□□□□ -0.7
PABPC4-225	ENST00000531243	FAM236A	A0A1B0GUQ0	79 aa		10.65	□□□□□ -0.7
PABPC4-225	ENST00000531243	FAM236B	A0A1B0GV22	79 aa		10.65	□□□□□ -0.7
PABPC4-225	ENST00000531243	SMIM20	Q8N5G0	67 aa		10.65	□□□□□ -0.7
PABPC4-225	ENST00000531243	CYP4F30P	Q9H0H9	118 aa		10.65	□□□□□ -0.7
PABPC4-225	ENST00000531243	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	10.64	□□□□□ -0.71
PABPC4-225	ENST00000531243	KRTAP9-2	Q9BYQ4	174 aa		10.64	□□□□□ -0.71
PABPC4-225	ENST00000531243	C1orf64	Q8NEQ6	169 aa		10.61	□□□□□ -0.71
PABPC4-225	ENST00000531243		H3BPC8	53 aa		10.6	□□□□□ -0.71
PABPC4-225	ENST00000531243	C4orf26	Q17RF5	130 aa		10.6	□□□□□ -0.71
PABPC4-225	ENST00000531243	LINC00208	Q96KT6	92 aa		10.6	□□□□□ -0.71
PABPC4-225	ENST00000531243	KRTAP9-6	A0A140TA67	174 aa		10.59	□□□□□ -0.71
PABPC4-225	ENST00000531243	H1FX-AS1	Q4G0G2	97 aa		10.56	□□□□□ -0.72
PABPC4-225	ENST00000531243	TRAV7	A0A075B6U4	112 aa		10.53	□□□□□ -0.72
PABPC4-225	ENST00000531243	FLG	P20930	4061 aa	Predicted RBP	10.51	□□□□□ -0.73
PABPC4-225	ENST00000531243	KRTAP10-6	P60371	365 aa	Predicted RBP	10.44	□□□□□ -0.74
PABPC4-225	ENST00000531243	KLKP1	Q107X0	134 aa		10.39	□□□□□ -0.75
PABPC4-225	ENST00000531243	KRTAP4-12	Q9BQ66	201 aa		10.39	□□□□□ -0.75
PABPC4-225	ENST00000531243	SERP2	Q8N6R1	65 aa		10.38	□□□□□ -0.75
PABPC4-225	ENST00000531243	KRTAP3-1	Q9BYR8	98 aa		10.38	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 231.9 ms