RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 TEX49A0A1B0GTD5 131 aa3.38□□□□□ -1.87
CSDE1-213ENST00000530784 TIMM17BO60830 172 aa3.38□□□□□ -1.87
CSDE1-213ENST00000530784 RPL37P61927 97 aaKnown RBP3.38□□□□□ -1.87
CSDE1-213ENST00000530784 C6orf99Q4VX62 202 aa3.38□□□□□ -1.87
CSDE1-213ENST00000530784 Q5XG85 94 aa3.37□□□□□ -1.87
CSDE1-213ENST00000530784 C2orf91Q6ZV80 131 aa3.37□□□□□ -1.87
CSDE1-213ENST00000530784 C14orf144Q96I85 54 aa3.37□□□□□ -1.87
CSDE1-213ENST00000530784 HIGD1BQ9P298 99 aa3.37□□□□□ -1.87
CSDE1-213ENST00000530784 MUC19Q7Z5P9 8384 aa3.36□□□□□ -1.87
CSDE1-213ENST00000530784 TRBV7-6A0A0J9YX20 115 aa3.36□□□□□ -1.87
CSDE1-213ENST00000530784 ZNF815PA8K554 130 aa3.36□□□□□ -1.87
CSDE1-213ENST00000530784 C1orf195Q5TG92 126 aa3.36□□□□□ -1.87
CSDE1-213ENST00000530784 IGLV5-48A0A075B6I7 105 aa3.35□□□□□ -1.87
CSDE1-213ENST00000530784 A0A0G2JQZ4 141 aa3.34□□□□□ -1.87
CSDE1-213ENST00000530784 A6NDN8 102 aa3.34□□□□□ -1.87
CSDE1-213ENST00000530784 TCL1BO95988 128 aa3.34□□□□□ -1.87
CSDE1-213ENST00000530784 TTTY13Q9BZ97 58 aa3.34□□□□□ -1.87
CSDE1-213ENST00000530784 M0R143 59 aa3.33□□□□□ -1.88
CSDE1-213ENST00000530784 HSD52Q0P140 79 aa3.33□□□□□ -1.88
CSDE1-213ENST00000530784 SCGB1D4Q6XE38 83 aa3.33□□□□□ -1.88
CSDE1-213ENST00000530784 COPS9Q8WXC6 57 aa3.33□□□□□ -1.88
CSDE1-213ENST00000530784 SNHG12Q9BXW3 62 aa3.33□□□□□ -1.88
CSDE1-213ENST00000530784 NHP2Q9NX24 153 aaKnown RBP3.33□□□□□ -1.88
CSDE1-213ENST00000530784 F8WEM9 126 aa3.32□□□□□ -1.88
CSDE1-213ENST00000530784 BVES-AS1Q5T3Y7 98 aa3.32□□□□□ -1.88
CSDE1-213ENST00000530784 IFITM1P13164 125 aa3.31□□□□□ -1.88
CSDE1-213ENST00000530784 Q6Q795 121 aa3.31□□□□□ -1.88
CSDE1-213ENST00000530784 KRTAP5-8O75690 187 aa3.3□□□□□ -1.88
CSDE1-213ENST00000530784 ATP11AUNQ6ZP68 121 aa3.3□□□□□ -1.88
CSDE1-213ENST00000530784 TRAV13-2A0A0B4J235 113 aa3.29□□□□□ -1.88
CSDE1-213ENST00000530784 FXYD2P54710 66 aa3.29□□□□□ -1.88
CSDE1-213ENST00000530784 COL5A1-AS1Q5SY13 56 aa3.29□□□□□ -1.88
CSDE1-213ENST00000530784 Q6JHZ5 121 aa3.29□□□□□ -1.88
CSDE1-213ENST00000530784 MUSTN1Q8IVN3 82 aa3.29□□□□□ -1.88
CSDE1-213ENST00000530784 SMIM11BQ8TCY0 68 aa3.29□□□□□ -1.88
CSDE1-213ENST00000530784 TRBV7-7A0A0K0K1E9 115 aa3.28□□□□□ -1.88
CSDE1-213ENST00000530784 VAMP3Q15836 100 aa3.28□□□□□ -1.88
CSDE1-213ENST00000530784 CLEC2BQ92478 149 aa3.28□□□□□ -1.88
CSDE1-213ENST00000530784 OBSCN-AS1Q96MR7 158 aa3.28□□□□□ -1.88
CSDE1-213ENST00000530784 TAX1BP3O14907 124 aa3.27□□□□□ -1.89
CSDE1-213ENST00000530784 Q6ZQY7 126 aa3.27□□□□□ -1.89
CSDE1-213ENST00000530784 A0A0B4J2C4 111 aa3.26□□□□□ -1.89
CSDE1-213ENST00000530784 hADV29S1A0JD25 119 aa3.26□□□□□ -1.89
CSDE1-213ENST00000530784 A8MUU9 505 aa3.26□□□□□ -1.89
CSDE1-213ENST00000530784 BATFQ16520 125 aa3.26□□□□□ -1.89
CSDE1-213ENST00000530784 LINC00575Q6W349 94 aa3.26□□□□□ -1.89
CSDE1-213ENST00000530784 USH2AO75445 5202 aa3.26□□□□□ -1.89
CSDE1-213ENST00000530784 OCIAD2Q56VL3 154 aa3.25□□□□□ -1.89
CSDE1-213ENST00000530784 Q96NJ1 140 aa3.25□□□□□ -1.89
CSDE1-213ENST00000530784 FLGP20930 4061 aaPredicted RBP3.24□□□□□ -1.89
CSDE1-213ENST00000530784 TRBV20-1A0A075B6N2 111 aa3.24□□□□□ -1.89
CSDE1-213ENST00000530784 LST1O00453 97 aa3.24□□□□□ -1.89
CSDE1-213ENST00000530784 PRO1854Q9UHT4 67 aa3.24□□□□□ -1.89
CSDE1-213ENST00000530784 A0A1B0GV90 55 aa3.23□□□□□ -1.89
CSDE1-213ENST00000530784 K7ERJ3 54 aa3.23□□□□□ -1.89
CSDE1-213ENST00000530784 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.23□□□□□ -1.89
CSDE1-213ENST00000530784 PPDPFLQ8WWR9 84 aa3.23□□□□□ -1.89
CSDE1-213ENST00000530784 C8orf17Q9NRJ1 99 aa3.23□□□□□ -1.89
CSDE1-213ENST00000530784 SS18L2Q9UHA2 77 aa3.23□□□□□ -1.89
CSDE1-213ENST00000530784 A0A1W2PPM0 123 aa3.22□□□□□ -1.89
CSDE1-213ENST00000530784 H3BUT2 72 aa3.22□□□□□ -1.89
CSDE1-213ENST00000530784 RAB37Q96AX2 223 aa3.22□□□□□ -1.89
CSDE1-213ENST00000530784 C20orf166-AS1Q96NR2 134 aa3.22□□□□□ -1.89
CSDE1-213ENST00000530784 IGKV4-1P06312 121 aa3.21□□□□□ -1.9
CSDE1-213ENST00000530784 SSPOA2VEC9 5147 aa3.21□□□□□ -1.9
CSDE1-213ENST00000530784 LYRM7Q5U5X0 104 aa3.2□□□□□ -1.9
CSDE1-213ENST00000530784 A0A087WSZ3 146 aa3.19□□□□□ -1.9
CSDE1-213ENST00000530784 FAM236DA0A1B0GTK5 79 aa3.19□□□□□ -1.9
CSDE1-213ENST00000530784 K7EP34 96 aa3.19□□□□□ -1.9
CSDE1-213ENST00000530784 FAM236CP0DP71 79 aa3.19□□□□□ -1.9
CSDE1-213ENST00000530784 FABP2P12104 132 aa3.19□□□□□ -1.9
CSDE1-213ENST00000530784 TEN1Q86WV5 123 aa3.19□□□□□ -1.9
CSDE1-213ENST00000530784 SPANXA2-OT1Q8N9U9 137 aa3.19□□□□□ -1.9
CSDE1-213ENST00000530784 SNCGO76070 127 aa3.18□□□□□ -1.9
CSDE1-213ENST00000530784 MT2AP02795 61 aa3.18□□□□□ -1.9
CSDE1-213ENST00000530784 GTF2H5Q6ZYL4 71 aa3.18□□□□□ -1.9
CSDE1-213ENST00000530784 NAA38Q9BRA0 125 aaKnown RBP3.18□□□□□ -1.9
CSDE1-213ENST00000530784 SPCS1Q9Y6A9 102 aa3.18□□□□□ -1.9
CSDE1-213ENST00000530784 COX6CP09669 75 aa3.17□□□□□ -1.9
CSDE1-213ENST00000530784 SIGMAR1Q99720 223 aa3.17□□□□□ -1.9
CSDE1-213ENST00000530784 FCGBPQ9Y6R7 5405 aaPredicted RBP3.16□□□□□ -1.9
CSDE1-213ENST00000530784 H0YGX0 51 aa3.16□□□□□ -1.9
CSDE1-213ENST00000530784 PSMB2P49721 201 aa3.16□□□□□ -1.9
CSDE1-213ENST00000530784 RBM12B-AS1Q9P1G2 102 aa3.16□□□□□ -1.9
CSDE1-213ENST00000530784 A0A1B0GX51 115 aa3.15□□□□□ -1.91
CSDE1-213ENST00000530784 F8W1H4 67 aa3.15□□□□□ -1.91
CSDE1-213ENST00000530784 H3BMG7 143 aa3.15□□□□□ -1.91
CSDE1-213ENST00000530784 TRACP01848 142 aa3.15□□□□□ -1.91
CSDE1-213ENST00000530784 MT1FP04733 61 aa3.15□□□□□ -1.91
CSDE1-213ENST00000530784 ATXN8Q156A1 80 aa3.15□□□□□ -1.91
CSDE1-213ENST00000530784 SPINT4Q6UDR6 99 aa3.15□□□□□ -1.91
CSDE1-213ENST00000530784 SCGB1C2P0DMR2 95 aa3.14□□□□□ -1.91
CSDE1-213ENST00000530784 LINC00313P59037 77 aa3.14□□□□□ -1.91
CSDE1-213ENST00000530784 A0A1W2PNM2 257 aa3.13□□□□□ -1.91
CSDE1-213ENST00000530784 H3BT86 120 aa3.13□□□□□ -1.91
CSDE1-213ENST00000530784 HRES1P13985 223 aa3.13□□□□□ -1.91
CSDE1-213ENST00000530784 SMIM26A0A096LP01 95 aa3.12□□□□□ -1.91
CSDE1-213ENST00000530784 MACF1Q9UPN3 7388 aaKnown RBP3.11□□□□□ -1.91
CSDE1-213ENST00000530784 TRBV7-4A0A0J9YYF1 115 aa3.11□□□□□ -1.91
CSDE1-213ENST00000530784 C9JAW5 83 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms