RNA–Protein interactions for RNA: ENST00000530618.1

SSBP3-213, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-213ENST00000530618 CCKP06307 115 aa2.81□□□□□ -1.96
SSBP3-213ENST00000530618 Q6Q795 121 aa2.81□□□□□ -1.96
SSBP3-213ENST00000530618 SMIM29Q86T20 159 aa2.81□□□□□ -1.96
SSBP3-213ENST00000530618 KRTAP13-2Q52LG2 175 aa2.8□□□□□ -1.96
SSBP3-213ENST00000530618 IGFL1Q6UW32 110 aa2.8□□□□□ -1.96
SSBP3-213ENST00000530618 HRCT1Q6UXD1 115 aa2.8□□□□□ -1.96
SSBP3-213ENST00000530618 MTURNQ8N3F0 131 aa2.8□□□□□ -1.96
SSBP3-213ENST00000530618 TRBV7-7A0A0K0K1E9 115 aa2.79□□□□□ -1.96
SSBP3-213ENST00000530618 C14orf132Q9NPU4 83 aa2.79□□□□□ -1.96
SSBP3-213ENST00000530618 A0A087WSZ3 146 aa2.78□□□□□ -1.96
SSBP3-213ENST00000530618 J3KT08 172 aa2.78□□□□□ -1.96
SSBP3-213ENST00000530618 ACYP1P07311 99 aa2.78□□□□□ -1.96
SSBP3-213ENST00000530618 NREPQ16612 68 aa2.78□□□□□ -1.96
SSBP3-213ENST00000530618 Q5XG85 94 aa2.78□□□□□ -1.96
SSBP3-213ENST00000530618 Q6ZQT0 140 aa2.78□□□□□ -1.96
SSBP3-213ENST00000530618 FP248Q71RG6 208 aaPredicted RBP2.78□□□□□ -1.96
SSBP3-213ENST00000530618 OBSCN-AS1Q96MR7 158 aa2.78□□□□□ -1.96
SSBP3-213ENST00000530618 SIGMAR1Q99720 223 aa2.78□□□□□ -1.96
SSBP3-213ENST00000530618 UBL5Q9BZL1 73 aa2.78□□□□□ -1.96
SSBP3-213ENST00000530618 NDUFB1O75438 58 aa2.77□□□□□ -1.97
SSBP3-213ENST00000530618 ETDBQ3ZM63 59 aa2.77□□□□□ -1.97
SSBP3-213ENST00000530618 ASB16-AS1Q495Z4 193 aa2.77□□□□□ -1.97
SSBP3-213ENST00000530618 PRO0461Q9UI25 63 aa2.77□□□□□ -1.97
SSBP3-213ENST00000530618 PRR4Q16378 134 aa2.76□□□□□ -1.97
SSBP3-213ENST00000530618 FAM240AA0A1B0GVK7 77 aa2.75□□□□□ -1.97
SSBP3-213ENST00000530618 A0A1W2PNM2 257 aa2.75□□□□□ -1.97
SSBP3-213ENST00000530618 BPY2O14599 106 aa2.74□□□□□ -1.97
SSBP3-213ENST00000530618 ATP5EP2Q5VTU8 51 aa2.74□□□□□ -1.97
SSBP3-213ENST00000530618 IGLV7-46A0A075B6I9 117 aa2.73□□□□□ -1.97
SSBP3-213ENST00000530618 IGKV4-1P06312 121 aa2.73□□□□□ -1.97
SSBP3-213ENST00000530618 A0A0G2JQZ4 141 aa2.72□□□□□ -1.97
SSBP3-213ENST00000530618 C8orf87E5RJ46 101 aa2.72□□□□□ -1.97
SSBP3-213ENST00000530618 SVIPQ8NHG7 77 aa2.72□□□□□ -1.97
SSBP3-213ENST00000530618 CXCL6P80162 114 aa2.71□□□□□ -1.98
SSBP3-213ENST00000530618 C1orf195Q5TG92 126 aa2.71□□□□□ -1.98
SSBP3-213ENST00000530618 Q6ZVQ6 151 aa2.71□□□□□ -1.98
SSBP3-213ENST00000530618 CDIP1Q9H305 208 aa2.71□□□□□ -1.98
SSBP3-213ENST00000530618 A8MWP4 228 aa2.7□□□□□ -1.98
SSBP3-213ENST00000530618 TPRXLQ17RH7 258 aa2.7□□□□□ -1.98
SSBP3-213ENST00000530618 RETNLBQ9BQ08 111 aa2.7□□□□□ -1.98
SSBP3-213ENST00000530618 IGHV6-1A0A0B4J1U7 121 aa2.69□□□□□ -1.98
SSBP3-213ENST00000530618 A0A1B0GVX0 72 aa2.69□□□□□ -1.98
SSBP3-213ENST00000530618 LINC00313P59037 77 aa2.69□□□□□ -1.98
SSBP3-213ENST00000530618 LINC00643Q86TS7 51 aa2.69□□□□□ -1.98
SSBP3-213ENST00000530618 LINC00472Q9H8W2 130 aa2.69□□□□□ -1.98
SSBP3-213ENST00000530618 LINC00846Q9NV44 126 aa2.69□□□□□ -1.98
SSBP3-213ENST00000530618 FLGP20930 4061 aaPredicted RBP2.68□□□□□ -1.98
SSBP3-213ENST00000530618 FSIP2Q5CZC0 6907 aa2.68□□□□□ -1.98
SSBP3-213ENST00000530618 ANAPC13Q9BS18 74 aa2.68□□□□□ -1.98
SSBP3-213ENST00000530618 MT-ATP8P03928 68 aa2.67□□□□□ -1.98
SSBP3-213ENST00000530618 KRTAP5-9P26371 169 aa2.67□□□□□ -1.98
SSBP3-213ENST00000530618 HIST1H4AP62805 103 aaKnown RBP2.67□□□□□ -1.98
SSBP3-213ENST00000530618 DEFB116Q30KQ4 102 aa2.67□□□□□ -1.98
SSBP3-213ENST00000530618 PRR15Q8IV56 129 aa2.67□□□□□ -1.98
SSBP3-213ENST00000530618 hDV103S1A0JD37 113 aa2.66□□□□□ -1.98
SSBP3-213ENST00000530618 C9orf92A6NGG3 77 aa2.66□□□□□ -1.98
SSBP3-213ENST00000530618 SEC61BP60468 96 aaKnown RBP2.66□□□□□ -1.98
SSBP3-213ENST00000530618 ATP11AUNQ6ZP68 121 aa2.66□□□□□ -1.98
SSBP3-213ENST00000530618 Q96NJ1 140 aa2.66□□□□□ -1.98
SSBP3-213ENST00000530618 HCG22E2RYF7 251 aa2.65□□□□□ -1.99
SSBP3-213ENST00000530618 K7EQZ3 153 aa2.65□□□□□ -1.99
SSBP3-213ENST00000530618 NDUFS5O43920 106 aa2.65□□□□□ -1.99
SSBP3-213ENST00000530618 KRTAP13-3Q3SY46 172 aa2.65□□□□□ -1.99
SSBP3-213ENST00000530618 CASC2Q6XLA1 102 aa2.65□□□□□ -1.99
SSBP3-213ENST00000530618 C8orf17Q9NRJ1 99 aa2.65□□□□□ -1.99
SSBP3-213ENST00000530618 IGKV3D-7A0A0C4DH55 119 aa2.64□□□□□ -1.99
SSBP3-213ENST00000530618 DSCR10P59022 87 aa2.64□□□□□ -1.99
SSBP3-213ENST00000530618 Q75L30 129 aa2.64□□□□□ -1.99
SSBP3-213ENST00000530618 TMEM254Q8TBM7 123 aa2.64□□□□□ -1.99
SSBP3-213ENST00000530618 IMUPQ9GZP8 106 aa2.64□□□□□ -1.99
SSBP3-213ENST00000530618 MRPL34Q9BQ48 92 aaKnown RBP2.63□□□□□ -1.99
SSBP3-213ENST00000530618 KRTAP4-1Q9BYQ7 146 aa2.63□□□□□ -1.99
SSBP3-213ENST00000530618 TP53AIP1Q9HCN2 124 aa2.63□□□□□ -1.99
SSBP3-213ENST00000530618 C20orf166-AS1Q96NR2 134 aa2.62□□□□□ -1.99
SSBP3-213ENST00000530618 A0A0U1RQV1 116 aa2.61□□□□□ -1.99
SSBP3-213ENST00000530618 MMP24-AS1A0A0U1RRL7 71 aa2.61□□□□□ -1.99
SSBP3-213ENST00000530618 RPL37P61927 97 aaKnown RBP2.61□□□□□ -1.99
SSBP3-213ENST00000530618 WFDC13Q8IUB5 93 aa2.61□□□□□ -1.99
SSBP3-213ENST00000530618 SMIM20Q8N5G0 67 aa2.61□□□□□ -1.99
SSBP3-213ENST00000530618 Q8N9L7 120 aa2.61□□□□□ -1.99
SSBP3-213ENST00000530618 SSPOA2VEC9 5147 aa2.6□□□□□ -1.99
SSBP3-213ENST00000530618 A8MUU9 505 aa2.6□□□□□ -1.99
SSBP3-213ENST00000530618 KRTAP19-2Q3LHN2 52 aa2.6□□□□□ -1.99
SSBP3-213ENST00000530618 Q8N9P0 234 aaPredicted RBP2.6□□□□□ -1.99
SSBP3-213ENST00000530618 ATOX1O00244 68 aa2.59□□□□□ -1.99
SSBP3-213ENST00000530618 KRTAP5-11Q6L8G4 156 aa2.59□□□□□ -1.99
SSBP3-213ENST00000530618 FAM236AA0A1B0GUQ0 79 aa2.58□□□□□ -2
SSBP3-213ENST00000530618 FAM236BA0A1B0GV22 79 aa2.58□□□□□ -2
SSBP3-213ENST00000530618 CCDC179H3BU77 68 aa2.58□□□□□ -2
SSBP3-213ENST00000530618 UQCRQO14949 82 aa2.58□□□□□ -2
SSBP3-213ENST00000530618 MP68P56378 58 aa2.58□□□□□ -2
SSBP3-213ENST00000530618 ZCCHC13Q8WW36 166 aaKnown RBP2.58□□□□□ -2
SSBP3-213ENST00000530618 USH2AO75445 5202 aa2.58□□□□□ -2
SSBP3-213ENST00000530618 TRAV22A0A0B4J277 110 aa2.57□□□□□ -2
SSBP3-213ENST00000530618 KRTAP16-1A8MUX0 517 aa2.57□□□□□ -2
SSBP3-213ENST00000530618 A0A087WVE0 104 aa2.56□□□□□ -2
SSBP3-213ENST00000530618 H3BPC8 53 aa2.56□□□□□ -2
SSBP3-213ENST00000530618 COX7CP15954 63 aa2.56□□□□□ -2
SSBP3-213ENST00000530618 PCOTHQ58A44 107 aa2.56□□□□□ -2
SSBP3-213ENST00000530618 C7orf65Q6ZTY9 151 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms