RNA–Protein interactions for RNA: ENST00000530404.5

TSPAN4-219, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-219ENST00000530404 A0A1B0GVX0 72 aa10.13□□□□□ -0.79
TSPAN4-219ENST00000530404 MACF1Q9UPN3 7388 aaKnown RBP10.12□□□□□ -0.79
TSPAN4-219ENST00000530404 H3BQ85 93 aa10.12□□□□□ -0.79
TSPAN4-219ENST00000530404 C8orf87E5RJ46 101 aa10.1□□□□□ -0.79
TSPAN4-219ENST00000530404 MTURNQ8N3F0 131 aa10.09□□□□□ -0.79
TSPAN4-219ENST00000530404 ZCCHC13Q8WW36 166 aaKnown RBP10.09□□□□□ -0.79
TSPAN4-219ENST00000530404 UBE2V1Q13404 147 aa10.07□□□□□ -0.8
TSPAN4-219ENST00000530404 COX6CP09669 75 aa10.06□□□□□ -0.8
TSPAN4-219ENST00000530404 SPINK7P58062 85 aa10.06□□□□□ -0.8
TSPAN4-219ENST00000530404 SYNE2Q8WXH0 6885 aaKnown RBP10.06□□□□□ -0.8
TSPAN4-219ENST00000530404 HSD52Q0P140 79 aa10.05□□□□□ -0.8
TSPAN4-219ENST00000530404 RBM3P98179 157 aaKnown RBP10.01□□□□□ -0.81
TSPAN4-219ENST00000530404 DSCR8Q96T75 97 aa10□□□□□ -0.81
TSPAN4-219ENST00000530404 KRTAP19-6Q3LI70 58 aa9.97□□□□□ -0.81
TSPAN4-219ENST00000530404 WFDC13Q8IUB5 93 aa9.97□□□□□ -0.81
TSPAN4-219ENST00000530404 J3KT08 172 aa9.96□□□□□ -0.82
TSPAN4-219ENST00000530404 SCGB1C2P0DMR2 95 aa9.95□□□□□ -0.82
TSPAN4-219ENST00000530404 Q8N9P0 234 aaPredicted RBP9.95□□□□□ -0.82
TSPAN4-219ENST00000530404 PYY3Q5JQD4 70 aa9.94□□□□□ -0.82
TSPAN4-219ENST00000530404 LINC00846Q9NV44 126 aa9.94□□□□□ -0.82
TSPAN4-219ENST00000530404 A8MWP4 228 aa9.93□□□□□ -0.82
TSPAN4-219ENST00000530404 C9JAW5 83 aa9.92□□□□□ -0.82
TSPAN4-219ENST00000530404 Q6ZQT0 140 aa9.92□□□□□ -0.82
TSPAN4-219ENST00000530404 LYRM7Q5U5X0 104 aa9.91□□□□□ -0.82
TSPAN4-219ENST00000530404 C8orf17Q9NRJ1 99 aa9.91□□□□□ -0.82
TSPAN4-219ENST00000530404 NDUFB1O75438 58 aa9.9□□□□□ -0.82
TSPAN4-219ENST00000530404 BAALC-AS2P0C853 105 aa9.9□□□□□ -0.82
TSPAN4-219ENST00000530404 C21orf62-AS1Q17RA5 79 aa9.85□□□□□ -0.83
TSPAN4-219ENST00000530404 IGKV3D-7A0A0C4DH55 119 aa9.84□□□□□ -0.83
TSPAN4-219ENST00000530404 UQCR10Q9UDW1 63 aa9.84□□□□□ -0.83
TSPAN4-219ENST00000530404 Q6ZVQ6 151 aa9.81□□□□□ -0.84
TSPAN4-219ENST00000530404 NAA38Q9BRA0 125 aaKnown RBP9.76□□□□□ -0.85
TSPAN4-219ENST00000530404 LOC110117498A0A087WWA1 95 aa9.74□□□□□ -0.85
TSPAN4-219ENST00000530404 JMJD7-PLA2G4BH0Y9G9 81 aa9.73□□□□□ -0.85
TSPAN4-219ENST00000530404 H1FX-AS1Q4G0G2 97 aa9.73□□□□□ -0.85
TSPAN4-219ENST00000530404 PRR15Q8IV56 129 aa9.73□□□□□ -0.85
TSPAN4-219ENST00000530404 MMP24-AS1A0A0U1RRL7 71 aa9.72□□□□□ -0.85
TSPAN4-219ENST00000530404 C14orf132Q9NPU4 83 aa9.72□□□□□ -0.85
TSPAN4-219ENST00000530404 ATXN8Q156A1 80 aa9.71□□□□□ -0.86
TSPAN4-219ENST00000530404 MRPL34Q9BQ48 92 aaKnown RBP9.71□□□□□ -0.86
TSPAN4-219ENST00000530404 A0A1B0GW54 56 aa9.69□□□□□ -0.86
TSPAN4-219ENST00000530404 KRTAP6-3Q3LI67 103 aa9.69□□□□□ -0.86
TSPAN4-219ENST00000530404 TMEM254Q8TBM7 123 aa9.69□□□□□ -0.86
TSPAN4-219ENST00000530404 NDUFS5O43920 106 aa9.67□□□□□ -0.86
TSPAN4-219ENST00000530404 NREPQ16612 68 aa9.67□□□□□ -0.86
TSPAN4-219ENST00000530404 PDE6GP18545 87 aa9.65□□□□□ -0.86
TSPAN4-219ENST00000530404 TMA7Q9Y2S6 64 aaKnown RBP9.64□□□□□ -0.87
TSPAN4-219ENST00000530404 IGKV2D-30A0A075B6S6 120 aa9.63□□□□□ -0.87
TSPAN4-219ENST00000530404 hDV103S1A0JD37 113 aa9.63□□□□□ -0.87
TSPAN4-219ENST00000530404 K7EQZ3 153 aa9.63□□□□□ -0.87
TSPAN4-219ENST00000530404 IGKV2-30P06310 120 aa9.63□□□□□ -0.87
TSPAN4-219ENST00000530404 Q5W150 140 aa9.58□□□□□ -0.88
TSPAN4-219ENST00000530404 C7orf65Q6ZTY9 151 aa9.56□□□□□ -0.88
TSPAN4-219ENST00000530404 M0R143 59 aa9.55□□□□□ -0.88
TSPAN4-219ENST00000530404 C4orf26Q17RF5 130 aa9.5□□□□□ -0.89
TSPAN4-219ENST00000530404 BPY2O14599 106 aa9.47□□□□□ -0.89
TSPAN4-219ENST00000530404 C5orf47Q569G3 176 aa9.46□□□□□ -0.9
TSPAN4-219ENST00000530404 Q8N9L7 120 aa9.45□□□□□ -0.9
TSPAN4-219ENST00000530404 MUC12Q9UKN1 5478 aa9.44□□□□□ -0.9
TSPAN4-219ENST00000530404 HCG22E2RYF7 251 aa9.44□□□□□ -0.9
TSPAN4-219ENST00000530404 NEBP20929 6669 aa9.44□□□□□ -0.9
TSPAN4-219ENST00000530404 FAM236AA0A1B0GUQ0 79 aa9.43□□□□□ -0.9
TSPAN4-219ENST00000530404 FAM236BA0A1B0GV22 79 aa9.43□□□□□ -0.9
TSPAN4-219ENST00000530404 A6NN06 94 aa9.41□□□□□ -0.9
TSPAN4-219ENST00000530404 MT1BP07438 61 aa9.41□□□□□ -0.9
TSPAN4-219ENST00000530404 CASC2Q6XLA1 102 aa9.41□□□□□ -0.9
TSPAN4-219ENST00000530404 BATFQ16520 125 aa9.39□□□□□ -0.91
TSPAN4-219ENST00000530404 H3BT86 120 aa9.37□□□□□ -0.91
TSPAN4-219ENST00000530404 Q5VV11 94 aa9.35□□□□□ -0.91
TSPAN4-219ENST00000530404 KRTAP3-1Q9BYR8 98 aa9.35□□□□□ -0.91
TSPAN4-219ENST00000530404 S4R3F8 94 aa9.33□□□□□ -0.92
TSPAN4-219ENST00000530404 TSTD3H0UI37 97 aa9.32□□□□□ -0.92
TSPAN4-219ENST00000530404 CXCL6P80162 114 aa9.31□□□□□ -0.92
TSPAN4-219ENST00000530404 KRTAP19-8Q3LI54 63 aa9.29□□□□□ -0.92
TSPAN4-219ENST00000530404 C9orf118A6NHY6 69 aa9.28□□□□□ -0.92
TSPAN4-219ENST00000530404 LCA10Q71F78 164 aa9.28□□□□□ -0.92
TSPAN4-219ENST00000530404 SPRR2GQ9BYE4 73 aa9.28□□□□□ -0.92
TSPAN4-219ENST00000530404 A0A1W2PPM0 123 aa9.26□□□□□ -0.93
TSPAN4-219ENST00000530404 CSAG1Q6PB30 78 aa9.25□□□□□ -0.93
TSPAN4-219ENST00000530404 C1orf64Q8NEQ6 169 aa9.25□□□□□ -0.93
TSPAN4-219ENST00000530404 TAX1BP3O14907 124 aa9.24□□□□□ -0.93
TSPAN4-219ENST00000530404 KRTAP10-5P60370 271 aa9.23□□□□□ -0.93
TSPAN4-219ENST00000530404 SMIM6P0DI80 62 aa9.22□□□□□ -0.93
TSPAN4-219ENST00000530404 KRTAP20-1Q3LI63 56 aa9.17□□□□□ -0.94
TSPAN4-219ENST00000530404 KLKP1Q107X0 134 aa9.16□□□□□ -0.94
TSPAN4-219ENST00000530404 SMCPP49901 116 aaPredicted RBP9.15□□□□□ -0.94
TSPAN4-219ENST00000530404 UBL5Q9BZL1 73 aa9.12□□□□□ -0.95
TSPAN4-219ENST00000530404 KRTAP3-3Q9BYR6 98 aa9.11□□□□□ -0.95
TSPAN4-219ENST00000530404 SPCS1Q9Y6A9 102 aa9.11□□□□□ -0.95
TSPAN4-219ENST00000530404 MDN1Q9NU22 5596 aa9.1□□□□□ -0.95
TSPAN4-219ENST00000530404 KRTAP5-9P26371 169 aa9.1□□□□□ -0.95
TSPAN4-219ENST00000530404 KMT2DO14686 5537 aa9.1□□□□□ -0.95
TSPAN4-219ENST00000530404 LOC105371267A0A1B0GV96 52 aa9.06□□□□□ -0.96
TSPAN4-219ENST00000530404 IMUPQ9GZP8 106 aa9.05□□□□□ -0.96
TSPAN4-219ENST00000530404 A0A087WVE0 104 aa9.04□□□□□ -0.96
TSPAN4-219ENST00000530404 TP53AIP1Q9HCN2 124 aa9.02□□□□□ -0.97
TSPAN4-219ENST00000530404 PRO0461Q9UI25 63 aa8.99□□□□□ -0.97
TSPAN4-219ENST00000530404 CYP4F30PQ9H0H9 118 aa8.95□□□□□ -0.98
TSPAN4-219ENST00000530404 CRIPTQ9P021 101 aa8.94□□□□□ -0.98
TSPAN4-219ENST00000530404 K7EP34 96 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms