RNA–Protein interactions for RNA: ENST00000529813.1

USP47-208, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 3,123 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-208ENST00000529813 KRTAP4-2Q9BYR5 136 aa2.69□□□□□ -1.98
USP47-208ENST00000529813 IGLV7-46A0A075B6I9 117 aa2.69□□□□□ -1.98
USP47-208ENST00000529813 A0A0G2JQZ4 141 aa2.69□□□□□ -1.98
USP47-208ENST00000529813 KRTAP4-16G5E9R7 235 aaPredicted RBP2.69□□□□□ -1.98
USP47-208ENST00000529813 DNAL4O96015 105 aa2.69□□□□□ -1.98
USP47-208ENST00000529813 KRTAP19-1Q8IUB9 90 aa2.69□□□□□ -1.98
USP47-208ENST00000529813 MPLKIPQ8TAP9 179 aa2.69□□□□□ -1.98
USP47-208ENST00000529813 SNURFQ9Y675 71 aa2.69□□□□□ -1.98
USP47-208ENST00000529813 H7BZZ5 65 aa2.68□□□□□ -1.98
USP47-208ENST00000529813 F8WEM9 126 aa2.68□□□□□ -1.98
USP47-208ENST00000529813 RBM3P98179 157 aaKnown RBP2.68□□□□□ -1.98
USP47-208ENST00000529813 SERP1Q9Y6X1 66 aa2.68□□□□□ -1.98
USP47-208ENST00000529813 ELOF1P60002 83 aaKnown RBP2.68□□□□□ -1.98
USP47-208ENST00000529813 Q6ZQY7 126 aa2.67□□□□□ -1.98
USP47-208ENST00000529813 TNXBP22105 4242 aa2.67□□□□□ -1.98
USP47-208ENST00000529813 SPAG11AQ6PDA7 123 aa2.67□□□□□ -1.98
USP47-208ENST00000529813 KRTAP4-9Q9BYQ8 210 aa2.67□□□□□ -1.98
USP47-208ENST00000529813 SMIM26A0A096LP01 95 aa2.66□□□□□ -1.98
USP47-208ENST00000529813 Q6JHZ5 121 aa2.66□□□□□ -1.98
USP47-208ENST00000529813 CCKP06307 115 aa2.66□□□□□ -1.98
USP47-208ENST00000529813 SSBP3-AS1Q7Z2R9 100 aa2.66□□□□□ -1.98
USP47-208ENST00000529813 RNF213Q63HN8 5207 aa2.66□□□□□ -1.98
USP47-208ENST00000529813 TRBV7-6A0A0J9YX20 115 aa2.66□□□□□ -1.98
USP47-208ENST00000529813 SPINK1P00995 79 aa2.65□□□□□ -1.98
USP47-208ENST00000529813 PMAIP1Q13794 54 aa2.65□□□□□ -1.98
USP47-208ENST00000529813 LINC00483Q53H64 154 aa2.64□□□□□ -1.99
USP47-208ENST00000529813 C9orf92A6NGG3 77 aa2.64□□□□□ -1.99
USP47-208ENST00000529813 LINC00575Q6W349 94 aa2.64□□□□□ -1.99
USP47-208ENST00000529813 LPAP08519 4548 aa2.64□□□□□ -1.99
USP47-208ENST00000529813 Q8N377 158 aa2.64□□□□□ -1.99
USP47-208ENST00000529813 KLKP1Q107X0 134 aa2.62□□□□□ -1.99
USP47-208ENST00000529813 LIMD2Q9BT23 127 aa2.62□□□□□ -1.99
USP47-208ENST00000529813 A8MU10 97 aa2.62□□□□□ -1.99
USP47-208ENST00000529813 H0YGX0 51 aa2.62□□□□□ -1.99
USP47-208ENST00000529813 KRTAP5-3Q6L8H2 238 aa2.61□□□□□ -1.99
USP47-208ENST00000529813 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.61□□□□□ -1.99
USP47-208ENST00000529813 SMIM29Q86T20 159 aa2.61□□□□□ -1.99
USP47-208ENST00000529813 OBSCN-AS1Q96MR7 158 aa2.61□□□□□ -1.99
USP47-208ENST00000529813 TRAV7A0A075B6U4 112 aa2.61□□□□□ -1.99
USP47-208ENST00000529813 SPRR1BP22528 89 aa2.61□□□□□ -1.99
USP47-208ENST00000529813 LINC01547P58512 204 aaPredicted RBP2.6□□□□□ -1.99
USP47-208ENST00000529813 IGLV5-48A0A075B6I7 105 aa2.59□□□□□ -1.99
USP47-208ENST00000529813 PSPHP1O15172 72 aa2.59□□□□□ -1.99
USP47-208ENST00000529813 CD164Q04900 197 aa2.59□□□□□ -1.99
USP47-208ENST00000529813 IGFL1Q6UW32 110 aa2.59□□□□□ -1.99
USP47-208ENST00000529813 PRR15Q8IV56 129 aa2.59□□□□□ -1.99
USP47-208ENST00000529813 UBL5Q9BZL1 73 aa2.59□□□□□ -1.99
USP47-208ENST00000529813 ORMDL1Q9P0S3 153 aa2.59□□□□□ -2
USP47-208ENST00000529813 TRBV7-4A0A0J9YYF1 115 aa2.58□□□□□ -2
USP47-208ENST00000529813 TPRXLQ17RH7 258 aa2.58□□□□□ -2
USP47-208ENST00000529813 A0A087WSZ3 146 aa2.58□□□□□ -2
USP47-208ENST00000529813 ATP5EP2Q5VTU8 51 aa2.57□□□□□ -2
USP47-208ENST00000529813 TMEM254Q8TBM7 123 aa2.57□□□□□ -2
USP47-208ENST00000529813 DEFB116Q30KQ4 102 aa2.57□□□□□ -2
USP47-208ENST00000529813 KRTAP13-3Q3SY46 172 aa2.57□□□□□ -2
USP47-208ENST00000529813 RBM12B-AS1Q9P1G2 102 aa2.57□□□□□ -2
USP47-208ENST00000529813 KRTAP9-8Q9BYQ0 159 aa2.57□□□□□ -2
USP47-208ENST00000529813 MUC2Q02817 5179 aa2.56□□□□□ -2
USP47-208ENST00000529813 SEC61BP60468 96 aaKnown RBP2.56□□□□□ -2
USP47-208ENST00000529813 Q6ZVQ6 151 aa2.56□□□□□ -2
USP47-208ENST00000529813 Q8N9L7 120 aa2.56□□□□□ -2
USP47-208ENST00000529813 IGLV8-61A0A075B6I0 122 aa2.56□□□□□ -2
USP47-208ENST00000529813 NREPQ16612 68 aa2.56□□□□□ -2
USP47-208ENST00000529813 JMJD7-PLA2G4BH0Y9G9 81 aa2.55□□□□□ -2
USP47-208ENST00000529813 NDUFC1O43677 76 aa2.55□□□□□ -2
USP47-208ENST00000529813 RPS29P62273 56 aaKnown RBP2.55□□□□□ -2
USP47-208ENST00000529813 PCOTHQ58A44 107 aa2.55□□□□□ -2
USP47-208ENST00000529813 TMEM256-PLSCR3K7ERE1 68 aa2.55□□□□□ -2
USP47-208ENST00000529813 BPY2O14599 106 aa2.55□□□□□ -2
USP47-208ENST00000529813 ATP5EP56381 51 aaPredicted RBP2.55□□□□□ -2
USP47-208ENST00000529813 Q6ZQT0 140 aa2.54□□□□□ -2
USP47-208ENST00000529813 TRAV22A0A0B4J277 110 aa2.54□□□□□ -2
USP47-208ENST00000529813 A8MUN3 132 aa2.54□□□□□ -2
USP47-208ENST00000529813 C1orf64Q8NEQ6 169 aa2.54□□□□□ -2
USP47-208ENST00000529813 SPTSSBQ8NFR3 76 aa2.54□□□□□ -2
USP47-208ENST00000529813 Q96NJ1 140 aa2.54□□□□□ -2
USP47-208ENST00000529813 IGKV4-1P06312 121 aa2.53□□□□□ -2
USP47-208ENST00000529813 hDV103S1A0JD37 113 aa2.53□□□□□ -2
USP47-208ENST00000529813 KRTAP4-11Q9BYQ6 195 aa2.53□□□□□ -2
USP47-208ENST00000529813 A0A1W2PNM2 257 aa2.53□□□□□ -2.01
USP47-208ENST00000529813 DSCR10P59022 87 aa2.52□□□□□ -2.01
USP47-208ENST00000529813 Q1T7F1 81 aa2.52□□□□□ -2.01
USP47-208ENST00000529813 COX6B2Q6YFQ2 88 aa2.52□□□□□ -2.01
USP47-208ENST00000529813 KTN1-AS1Q86SY8 53 aa2.52□□□□□ -2.01
USP47-208ENST00000529813 IGHV6-1A0A0B4J1U7 121 aa2.52□□□□□ -2.01
USP47-208ENST00000529813 H3BS24 57 aa2.51□□□□□ -2.01
USP47-208ENST00000529813 ATP11AUNQ6ZP68 121 aa2.51□□□□□ -2.01
USP47-208ENST00000529813 CXCL6P80162 114 aa2.51□□□□□ -2.01
USP47-208ENST00000529813 ASB16-AS1Q495Z4 193 aa2.51□□□□□ -2.01
USP47-208ENST00000529813 OCR1Q9BZK8 76 aa2.51□□□□□ -2.01
USP47-208ENST00000529813 H3BQ85 93 aa2.51□□□□□ -2.01
USP47-208ENST00000529813 CHKB-CPT1BH3BT56 60 aa2.5□□□□□ -2.01
USP47-208ENST00000529813 Q5VV11 94 aa2.5□□□□□ -2.01
USP47-208ENST00000529813 LOC110117498A0A087WWA1 95 aa2.49□□□□□ -2.01
USP47-208ENST00000529813 KRTAP4-1Q9BYQ7 146 aa2.49□□□□□ -2.01
USP47-208ENST00000529813 C8orf87E5RJ46 101 aa2.49□□□□□ -2.01
USP47-208ENST00000529813 M0R2T5 61 aa2.49□□□□□ -2.01
USP47-208ENST00000529813 LINC00313P59037 77 aa2.49□□□□□ -2.01
USP47-208ENST00000529813 HCG22E2RYF7 251 aa2.48□□□□□ -2.01
USP47-208ENST00000529813 LCA10Q71F78 164 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms