RNA–Protein interactions for RNA: ENST00000529667.1

SOX9-AS1-208, SOX9 antisense RNA 1, humanhuman

TSL 3 BASIC

Gene SOX9-AS1, Length 340 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-208ENST00000529667 SPINK1P00995 79 aa4.03□□□□□ -1.76
SOX9-AS1-208ENST00000529667 LINC00208Q96KT6 92 aa4.03□□□□□ -1.76
SOX9-AS1-208ENST00000529667 IGLV7-46A0A075B6I9 117 aa4.02□□□□□ -1.77
SOX9-AS1-208ENST00000529667 PLECQ15149 4684 aaKnown RBP4.02□□□□□ -1.77
SOX9-AS1-208ENST00000529667 Q1T7F1 81 aa4.02□□□□□ -1.77
SOX9-AS1-208ENST00000529667 SPINK6Q6UWN8 80 aa4.02□□□□□ -1.77
SOX9-AS1-208ENST00000529667 FAM229AH3BQW9 127 aa4□□□□□ -1.77
SOX9-AS1-208ENST00000529667 DEFB116Q30KQ4 102 aa4□□□□□ -1.77
SOX9-AS1-208ENST00000529667 IGHV6-1A0A0B4J1U7 121 aa3.99□□□□□ -1.77
SOX9-AS1-208ENST00000529667 LINC00313P59037 77 aa3.99□□□□□ -1.77
SOX9-AS1-208ENST00000529667 DNAH10Q8IVF4 4471 aa3.97□□□□□ -1.77
SOX9-AS1-208ENST00000529667 A0A0G2JQZ4 141 aa3.97□□□□□ -1.77
SOX9-AS1-208ENST00000529667 Q8N9P0 234 aaPredicted RBP3.97□□□□□ -1.77
SOX9-AS1-208ENST00000529667 RBM12B-AS1Q9P1G2 102 aa3.97□□□□□ -1.77
SOX9-AS1-208ENST00000529667 SRRM2Q9UQ35 2752 aaKnown RBP3.97□□□□□ -1.77
SOX9-AS1-208ENST00000529667 DNAH17Q9UFH2 4485 aa3.97□□□□□ -1.77
SOX9-AS1-208ENST00000529667 HECTD4Q9Y4D8 3996 aa3.96□□□□□ -1.77
SOX9-AS1-208ENST00000529667 NDUFS5O43920 106 aa3.96□□□□□ -1.78
SOX9-AS1-208ENST00000529667 KRTAP10-2P60368 255 aa3.96□□□□□ -1.78
SOX9-AS1-208ENST00000529667 LYSTQ99698 3801 aa3.95□□□□□ -1.78
SOX9-AS1-208ENST00000529667 KRTAP10-1P60331 282 aa3.95□□□□□ -1.78
SOX9-AS1-208ENST00000529667 SEC61BP60468 96 aaKnown RBP3.95□□□□□ -1.78
SOX9-AS1-208ENST00000529667 STARD9Q9P2P6 4700 aa3.94□□□□□ -1.78
SOX9-AS1-208ENST00000529667 DNAH2Q9P225 4427 aa3.94□□□□□ -1.78
SOX9-AS1-208ENST00000529667 ACYP2P14621 99 aa3.94□□□□□ -1.78
SOX9-AS1-208ENST00000529667 FP248Q71RG6 208 aaPredicted RBP3.94□□□□□ -1.78
SOX9-AS1-208ENST00000529667 TYMSOSQ8TAI1 123 aa3.94□□□□□ -1.78
SOX9-AS1-208ENST00000529667 ALMS1Q8TCU4 4167 aa3.93□□□□□ -1.78
SOX9-AS1-208ENST00000529667 KRTAP1-4P0C5Y4 121 aa3.92□□□□□ -1.78
SOX9-AS1-208ENST00000529667 KRTAP13-2Q52LG2 175 aa3.91□□□□□ -1.78
SOX9-AS1-208ENST00000529667 A8MUN3 132 aa3.9□□□□□ -1.79
SOX9-AS1-208ENST00000529667 LCE2AQ5TA79 106 aaPredicted RBP3.9□□□□□ -1.79
SOX9-AS1-208ENST00000529667 ANAPC11Q9NYG5 84 aa3.9□□□□□ -1.79
SOX9-AS1-208ENST00000529667 A0A087X002 238 aa3.89□□□□□ -1.79
SOX9-AS1-208ENST00000529667 KRTAP13-3Q3SY46 172 aa3.89□□□□□ -1.79
SOX9-AS1-208ENST00000529667 LINC00304Q8N9R0 145 aa3.89□□□□□ -1.79
SOX9-AS1-208ENST00000529667 BRK1Q8WUW1 75 aa3.89□□□□□ -1.79
SOX9-AS1-208ENST00000529667 KMT2AQ03164 3969 aa3.88□□□□□ -1.79
SOX9-AS1-208ENST00000529667 COA5Q86WW8 74 aa3.88□□□□□ -1.79
SOX9-AS1-208ENST00000529667 DNAH8Q96JB1 4490 aa3.88□□□□□ -1.79
SOX9-AS1-208ENST00000529667 IGKV2-30P06310 120 aa3.87□□□□□ -1.79
SOX9-AS1-208ENST00000529667 LCE2CQ5TA81 110 aa3.87□□□□□ -1.79
SOX9-AS1-208ENST00000529667 KTN1-AS1Q86SY8 53 aa3.87□□□□□ -1.79
SOX9-AS1-208ENST00000529667 PRR15LQ9BU68 103 aa3.87□□□□□ -1.79
SOX9-AS1-208ENST00000529667 LINC01558Q9Y6Z2 57 aa3.87□□□□□ -1.79
SOX9-AS1-208ENST00000529667 SPTSSBQ8NFR3 76 aa3.86□□□□□ -1.79
SOX9-AS1-208ENST00000529667 MPLKIPQ8TAP9 179 aa3.86□□□□□ -1.79
SOX9-AS1-208ENST00000529667 DMAC1Q96GE9 116 aa3.86□□□□□ -1.79
SOX9-AS1-208ENST00000529667 A0A1B0GVY2 172 aa3.85□□□□□ -1.79
SOX9-AS1-208ENST00000529667 KRTAP16-1A8MUX0 517 aa3.84□□□□□ -1.79
SOX9-AS1-208ENST00000529667 PCOTHQ58A44 107 aa3.84□□□□□ -1.79
SOX9-AS1-208ENST00000529667 Q5W150 140 aa3.84□□□□□ -1.79
SOX9-AS1-208ENST00000529667 NOTCH2NLQ7Z3S9 236 aa3.84□□□□□ -1.79
SOX9-AS1-208ENST00000529667 C7orf65Q6ZTY9 151 aa3.83□□□□□ -1.8
SOX9-AS1-208ENST00000529667 FRAS1Q86XX4 4008 aa3.83□□□□□ -1.8
SOX9-AS1-208ENST00000529667 CHKB-CPT1BH3BT56 60 aa3.82□□□□□ -1.8
SOX9-AS1-208ENST00000529667 PKD1P98161 4303 aa3.81□□□□□ -1.8
SOX9-AS1-208ENST00000529667 HRES1P13985 223 aa3.81□□□□□ -1.8
SOX9-AS1-208ENST00000529667 PRR4Q16378 134 aa3.81□□□□□ -1.8
SOX9-AS1-208ENST00000529667 C20orf166-AS1Q96NR2 134 aa3.81□□□□□ -1.8
SOX9-AS1-208ENST00000529667 A8MUU9 505 aa3.8□□□□□ -1.8
SOX9-AS1-208ENST00000529667 PSPHP1O15172 72 aa3.8□□□□□ -1.8
SOX9-AS1-208ENST00000529667 ATP11AUNQ6ZP68 121 aa3.8□□□□□ -1.8
SOX9-AS1-208ENST00000529667 LCA10Q71F78 164 aa3.8□□□□□ -1.8
SOX9-AS1-208ENST00000529667 DNAH11Q96DT5 4516 aa3.79□□□□□ -1.8
SOX9-AS1-208ENST00000529667 DNAH5Q8TE73 4624 aa3.79□□□□□ -1.8
SOX9-AS1-208ENST00000529667 IGKV2D-30A0A075B6S6 120 aa3.78□□□□□ -1.8
SOX9-AS1-208ENST00000529667 LORP23490 312 aaPredicted RBP3.78□□□□□ -1.8
SOX9-AS1-208ENST00000529667 Q5VV11 94 aa3.78□□□□□ -1.8
SOX9-AS1-208ENST00000529667 KMT2CQ8NEZ4 4911 aaKnown RBP3.77□□□□□ -1.81
SOX9-AS1-208ENST00000529667 CDC42SE1Q9NRR8 79 aa3.77□□□□□ -1.81
SOX9-AS1-208ENST00000529667 FAT2Q9NYQ8 4349 aa3.76□□□□□ -1.81
SOX9-AS1-208ENST00000529667 KRTAP10-4P60372 401 aaPredicted RBP3.76□□□□□ -1.81
SOX9-AS1-208ENST00000529667 SACSQ9NZJ4 4579 aa3.75□□□□□ -1.81
SOX9-AS1-208ENST00000529667 VPS13BQ7Z7G8 4022 aa3.74□□□□□ -1.81
SOX9-AS1-208ENST00000529667 A6NED7 52 aa3.74□□□□□ -1.81
SOX9-AS1-208ENST00000529667 LRP1BQ9NZR2 4599 aa3.73□□□□□ -1.81
SOX9-AS1-208ENST00000529667 A0A1B0GU69 56 aa3.73□□□□□ -1.81
SOX9-AS1-208ENST00000529667 KRTAP10-8P60410 259 aa3.73□□□□□ -1.81
SOX9-AS1-208ENST00000529667 UQCR11O14957 56 aa3.71□□□□□ -1.82
SOX9-AS1-208ENST00000529667 SMR3BP02814 79 aaPredicted RBP3.71□□□□□ -1.82
SOX9-AS1-208ENST00000529667 RYR3Q15413 4870 aa3.69□□□□□ -1.82
SOX9-AS1-208ENST00000529667 LINC01554Q52M75 96 aa3.68□□□□□ -1.82
SOX9-AS1-208ENST00000529667 SPATA8Q6RVD6 105 aa3.67□□□□□ -1.82
SOX9-AS1-208ENST00000529667 HYDINQ4G0P3 5121 aa3.67□□□□□ -1.82
SOX9-AS1-208ENST00000529667 SPINK7P58062 85 aa3.66□□□□□ -1.82
SOX9-AS1-208ENST00000529667 Q5VSD8 79 aa3.66□□□□□ -1.82
SOX9-AS1-208ENST00000529667 COX6B2Q6YFQ2 88 aa3.66□□□□□ -1.82
SOX9-AS1-208ENST00000529667 FLG2Q5D862 2391 aaPredicted RBP3.66□□□□□ -1.82
SOX9-AS1-208ENST00000529667 Q8N1X5 172 aa3.64□□□□□ -1.83
SOX9-AS1-208ENST00000529667 RYR2Q92736 4967 aa3.64□□□□□ -1.83
SOX9-AS1-208ENST00000529667 PKHD1L1Q86WI1 4243 aa3.64□□□□□ -1.83
SOX9-AS1-208ENST00000529667 DYNC1H1Q14204 4646 aaKnown RBP3.63□□□□□ -1.83
SOX9-AS1-208ENST00000529667 RPL37P61927 97 aaKnown RBP3.63□□□□□ -1.83
SOX9-AS1-208ENST00000529667 RETNLBQ9BQ08 111 aa3.63□□□□□ -1.83
SOX9-AS1-208ENST00000529667 PKHD1P08F94 4074 aa3.62□□□□□ -1.83
SOX9-AS1-208ENST00000529667 MIR22HGQ0VDD5 57 aa3.62□□□□□ -1.83
SOX9-AS1-208ENST00000529667 C9orf92A6NGG3 77 aa3.61□□□□□ -1.83
SOX9-AS1-208ENST00000529667 APOBP04114 4563 aaKnown RBP3.6□□□□□ -1.83
SOX9-AS1-208ENST00000529667 TPRXLQ17RH7 258 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms