RNA–Protein interactions for RNA: ENST00000529582.5

LTBP3-214, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 5

Gene LTBP3, Length 1,889 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-214ENST00000529582 LIMD2Q9BT23 127 aa13.28□□□□□ -0.28
LTBP3-214ENST00000529582 C8orf17Q9NRJ1 99 aa13.27□□□□□ -0.29
LTBP3-214ENST00000529582 C1orf195Q5TG92 126 aa13.26□□□□□ -0.29
LTBP3-214ENST00000529582 SPINK1P00995 79 aa13.25□□□□□ -0.29
LTBP3-214ENST00000529582 Q5VSD8 79 aa13.25□□□□□ -0.29
LTBP3-214ENST00000529582 C20orf197Q8N268 126 aa13.25□□□□□ -0.29
LTBP3-214ENST00000529582 LINC00304Q8N9R0 145 aa13.25□□□□□ -0.29
LTBP3-214ENST00000529582 CYSTM1Q9H1C7 97 aa13.24□□□□□ -0.29
LTBP3-214ENST00000529582 hDV103S1A0JD37 113 aa13.23□□□□□ -0.29
LTBP3-214ENST00000529582 SPAG11AQ6PDA7 123 aa13.2□□□□□ -0.3
LTBP3-214ENST00000529582 NOTCH2NLQ7Z3S9 236 aa13.19□□□□□ -0.3
LTBP3-214ENST00000529582 RPS29P62273 56 aaKnown RBP13.16□□□□□ -0.3
LTBP3-214ENST00000529582 KRTAP17-1Q9BYP8 105 aa13.16□□□□□ -0.3
LTBP3-214ENST00000529582 TMEM254Q8TBM7 123 aa13.15□□□□□ -0.3
LTBP3-214ENST00000529582 SNURFQ9Y675 71 aa13.15□□□□□ -0.3
LTBP3-214ENST00000529582 KLKP1Q107X0 134 aa13.14□□□□□ -0.31
LTBP3-214ENST00000529582 EPPK1P58107 5090 aaKnown RBP13.14□□□□□ -0.31
LTBP3-214ENST00000529582 A0A0U1RQV1 116 aa13.1□□□□□ -0.31
LTBP3-214ENST00000529582 C8orf87E5RJ46 101 aa13.1□□□□□ -0.31
LTBP3-214ENST00000529582 KIAA1109Q2LD37 5005 aa13.1□□□□□ -0.31
LTBP3-214ENST00000529582 MRPL34Q9BQ48 92 aaKnown RBP13.1□□□□□ -0.31
LTBP3-214ENST00000529582 C5orf47Q569G3 176 aa13.09□□□□□ -0.31
LTBP3-214ENST00000529582 FAM236DA0A1B0GTK5 79 aa13.06□□□□□ -0.32
LTBP3-214ENST00000529582 NDUFC1O43677 76 aa13.06□□□□□ -0.32
LTBP3-214ENST00000529582 FAM236CP0DP71 79 aa13.06□□□□□ -0.32
LTBP3-214ENST00000529582 LINC00313P59037 77 aa13.04□□□□□ -0.32
LTBP3-214ENST00000529582 H7BZZ5 65 aa13.04□□□□□ -0.32
LTBP3-214ENST00000529582 Q8N1X5 172 aa13.04□□□□□ -0.32
LTBP3-214ENST00000529582 NDUFS5O43920 106 aa13.02□□□□□ -0.33
LTBP3-214ENST00000529582 TP53AIP1Q9HCN2 124 aa13.02□□□□□ -0.33
LTBP3-214ENST00000529582 SERP1Q9Y6X1 66 aa13.02□□□□□ -0.33
LTBP3-214ENST00000529582 KRTAP10-8P60410 259 aa13□□□□□ -0.33
LTBP3-214ENST00000529582 H0Y9P7 68 aa12.99□□□□□ -0.33
LTBP3-214ENST00000529582 MP68P56378 58 aa12.99□□□□□ -0.33
LTBP3-214ENST00000529582 OXTP01178 125 aa12.98□□□□□ -0.33
LTBP3-214ENST00000529582 ZCCHC13Q8WW36 166 aaKnown RBP12.98□□□□□ -0.33
LTBP3-214ENST00000529582 LRP1Q07954 4544 aaKnown RBP12.98□□□□□ -0.33
LTBP3-214ENST00000529582 ATP5EP56381 51 aaPredicted RBP12.97□□□□□ -0.33
LTBP3-214ENST00000529582 TNXBP22105 4242 aa12.97□□□□□ -0.33
LTBP3-214ENST00000529582 FAT3Q8TDW7 4589 aa12.96□□□□□ -0.33
LTBP3-214ENST00000529582 TRAV22A0A0B4J277 110 aa12.94□□□□□ -0.34
LTBP3-214ENST00000529582 KRTAP16-1A8MUX0 517 aa12.93□□□□□ -0.34
LTBP3-214ENST00000529582 LINC00208Q96KT6 92 aa12.93□□□□□ -0.34
LTBP3-214ENST00000529582 H3BPC8 53 aa12.91□□□□□ -0.34
LTBP3-214ENST00000529582 Q8N9P0 234 aaPredicted RBP12.89□□□□□ -0.35
LTBP3-214ENST00000529582 FLG2Q5D862 2391 aaPredicted RBP12.87□□□□□ -0.35
LTBP3-214ENST00000529582 C1orf64Q8NEQ6 169 aa12.86□□□□□ -0.35
LTBP3-214ENST00000529582 RETNLBQ9BQ08 111 aa12.85□□□□□ -0.35
LTBP3-214ENST00000529582 SMIM26A0A096LP01 95 aa12.82□□□□□ -0.36
LTBP3-214ENST00000529582 Q5W150 140 aa12.82□□□□□ -0.36
LTBP3-214ENST00000529582 C4orf26Q17RF5 130 aa12.82□□□□□ -0.36
LTBP3-214ENST00000529582 KRTAP13-3Q3SY46 172 aa12.8□□□□□ -0.36
LTBP3-214ENST00000529582 MT1HL1P0DM35 61 aa12.78□□□□□ -0.36
LTBP3-214ENST00000529582 C9orf92A6NGG3 77 aa12.73□□□□□ -0.37
LTBP3-214ENST00000529582 KRTAP4-5Q9BYR2 181 aa12.73□□□□□ -0.37
LTBP3-214ENST00000529582 MYCBP2O75592 4640 aa12.71□□□□□ -0.37
LTBP3-214ENST00000529582 LOC101927531A0A1B0GV80 90 aa12.67□□□□□ -0.38
LTBP3-214ENST00000529582 PCOTHQ58A44 107 aa12.64□□□□□ -0.39
LTBP3-214ENST00000529582 FP248Q71RG6 208 aaPredicted RBP12.63□□□□□ -0.39
LTBP3-214ENST00000529582 DMBT1Q9UGM3 2413 aaPredicted RBP12.63□□□□□ -0.39
LTBP3-214ENST00000529582 C20orf166-AS1Q96NR2 134 aa12.61□□□□□ -0.39
LTBP3-214ENST00000529582 A8MUU9 505 aa12.61□□□□□ -0.39
LTBP3-214ENST00000529582 BIRC6Q9NR09 4857 aa12.61□□□□□ -0.39
LTBP3-214ENST00000529582 SPANXA2-OT1Q8N9U9 137 aa12.6□□□□□ -0.39
LTBP3-214ENST00000529582 CYP4F30PQ9H0H9 118 aa12.6□□□□□ -0.39
LTBP3-214ENST00000529582 PRR4Q16378 134 aa12.59□□□□□ -0.39
LTBP3-214ENST00000529582 IGKV2-30P06310 120 aa12.56□□□□□ -0.4
LTBP3-214ENST00000529582 PRO0628Q9UI54 55 aa12.54□□□□□ -0.4
LTBP3-214ENST00000529582 IGLV7-46A0A075B6I9 117 aa12.53□□□□□ -0.4
LTBP3-214ENST00000529582 HERC2O95714 4834 aa12.5□□□□□ -0.41
LTBP3-214ENST00000529582 ABCA13Q86UQ4 5058 aa12.48□□□□□ -0.41
LTBP3-214ENST00000529582 IGKV2D-30A0A075B6S6 120 aa12.47□□□□□ -0.41
LTBP3-214ENST00000529582 Q75L30 129 aa12.46□□□□□ -0.41
LTBP3-214ENST00000529582 HRES1P13985 223 aa12.42□□□□□ -0.42
LTBP3-214ENST00000529582 C7orf65Q6ZTY9 151 aa12.37□□□□□ -0.43
LTBP3-214ENST00000529582 XP32Q5T750 250 aa12.36□□□□□ -0.43
LTBP3-214ENST00000529582 MPLKIPQ8TAP9 179 aa12.36□□□□□ -0.43
LTBP3-214ENST00000529582 Q1T7F1 81 aa12.34□□□□□ -0.43
LTBP3-214ENST00000529582 RPL37P61927 97 aaKnown RBP12.32□□□□□ -0.44
LTBP3-214ENST00000529582 J3QL48 77 aa12.29□□□□□ -0.44
LTBP3-214ENST00000529582 ATP11AUNQ6ZP68 121 aa12.27□□□□□ -0.44
LTBP3-214ENST00000529582 BRK1Q8WUW1 75 aa12.27□□□□□ -0.45
LTBP3-214ENST00000529582 COA5Q86WW8 74 aa12.26□□□□□ -0.45
LTBP3-214ENST00000529582 V9GYY9 64 aa12.25□□□□□ -0.45
LTBP3-214ENST00000529582 TPRXLQ17RH7 258 aa12.25□□□□□ -0.45
LTBP3-214ENST00000529582 DMAC1Q96GE9 116 aa12.24□□□□□ -0.45
LTBP3-214ENST00000529582 SPINK7P58062 85 aa12.23□□□□□ -0.45
LTBP3-214ENST00000529582 ACYP2P14621 99 aa12.18□□□□□ -0.46
LTBP3-214ENST00000529582 LPAP08519 4548 aa12.06□□□□□ -0.48
LTBP3-214ENST00000529582 LRP2P98164 4655 aa12.02□□□□□ -0.48
LTBP3-214ENST00000529582 A8MUN3 132 aa12.02□□□□□ -0.48
LTBP3-214ENST00000529582 CHKB-CPT1BH3BT56 60 aa12□□□□□ -0.49
LTBP3-214ENST00000529582 PSPHP1O15172 72 aa12□□□□□ -0.49
LTBP3-214ENST00000529582 KRTAP3-1Q9BYR8 98 aa11.99□□□□□ -0.49
LTBP3-214ENST00000529582 COX6B2Q6YFQ2 88 aa11.95□□□□□ -0.5
LTBP3-214ENST00000529582 PCLOQ9Y6V0 5065 aa11.92□□□□□ -0.5
LTBP3-214ENST00000529582 Q5VV11 94 aa11.91□□□□□ -0.5
LTBP3-214ENST00000529582 SEC61BP60468 96 aaKnown RBP11.83□□□□□ -0.52
LTBP3-214ENST00000529582 PRR15LQ9BU68 103 aa11.82□□□□□ -0.52
LTBP3-214ENST00000529582 LINC01558Q9Y6Z2 57 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms