RNA–Protein interactions for RNA: ENST00000529552.5

FGFR1-233, Transcript of fibroblast growth factor receptor 1, human

TSL 4

Gene FGFR1, Length 688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FGFR1-233	ENST00000529552	MTURN	Q8N3F0	131 aa		4.55	□□□□□ -1.68
FGFR1-233	ENST00000529552	FAM218A	Q96MZ4	157 aa		4.55	□□□□□ -1.68
FGFR1-233	ENST00000529552		A0A0B4J2C4	111 aa		4.54	□□□□□ -1.68
FGFR1-233	ENST00000529552	COX8A	P10176	69 aa		4.54	□□□□□ -1.68
FGFR1-233	ENST00000529552	HRES1	P13985	223 aa		4.54	□□□□□ -1.68
FGFR1-233	ENST00000529552		A0A1W2PNM2	257 aa		4.53	□□□□□ -1.68
FGFR1-233	ENST00000529552	KRTAP16-1	A8MUX0	517 aa		4.53	□□□□□ -1.68
FGFR1-233	ENST00000529552	S100A6	P06703	90 aa		4.53	□□□□□ -1.68
FGFR1-233	ENST00000529552	LCE1A	Q5T7P2	110 aa		4.53	□□□□□ -1.68
FGFR1-233	ENST00000529552	KRTAP5-3	Q6L8H2	238 aa		4.53	□□□□□ -1.68
FGFR1-233	ENST00000529552	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	4.53	□□□□□ -1.68
FGFR1-233	ENST00000529552	TRBV7-4	A0A0J9YYF1	115 aa		4.52	□□□□□ -1.69
FGFR1-233	ENST00000529552	DLEU1	O43261	78 aa		4.52	□□□□□ -1.69
FGFR1-233	ENST00000529552	DNAL4	O96015	105 aa		4.52	□□□□□ -1.69
FGFR1-233	ENST00000529552	ANKRD29	Q8N6D5	301 aa		4.52	□□□□□ -1.69
FGFR1-233	ENST00000529552	IGHV6-1	A0A0B4J1U7	121 aa		4.51	□□□□□ -1.69
FGFR1-233	ENST00000529552		A0A1B0GV72	72 aa		4.5	□□□□□ -1.69
FGFR1-233	ENST00000529552		H3BQ85	93 aa		4.5	□□□□□ -1.69
FGFR1-233	ENST00000529552	TRAC	P01848	142 aa		4.5	□□□□□ -1.69
FGFR1-233	ENST00000529552	NOTCH2NL	Q7Z3S9	236 aa		4.5	□□□□□ -1.69
FGFR1-233	ENST00000529552	HIGD1B	Q9P298	99 aa		4.5	□□□□□ -1.69
FGFR1-233	ENST00000529552	PRO1854	Q9UHT4	67 aa		4.5	□□□□□ -1.69
FGFR1-233	ENST00000529552	DEFB116	Q30KQ4	102 aa		4.49	□□□□□ -1.69
FGFR1-233	ENST00000529552	ORMDL1	Q9P0S3	153 aa		4.49	□□□□□ -1.69
FGFR1-233	ENST00000529552	C8orf87	E5RJ46	101 aa		4.48	□□□□□ -1.69
FGFR1-233	ENST00000529552	CCK	P06307	115 aa		4.48	□□□□□ -1.69
FGFR1-233	ENST00000529552	C14orf144	Q96I85	54 aa		4.48	□□□□□ -1.69
FGFR1-233	ENST00000529552	LINC00472	Q9H8W2	130 aa		4.47	□□□□□ -1.69
FGFR1-233	ENST00000529552	MACF1	Q9UPN3	7388 aa	Known RBP	4.46	□□□□□ -1.69
FGFR1-233	ENST00000529552		A0A1B0GVX0	72 aa		4.46	□□□□□ -1.7
FGFR1-233	ENST00000529552	TMEM256-PLSCR3	K7ERE1	68 aa		4.46	□□□□□ -1.7
FGFR1-233	ENST00000529552	SPATA45	Q537H7	98 aa		4.46	□□□□□ -1.7
FGFR1-233	ENST00000529552	CEND1	Q8N111	149 aa		4.46	□□□□□ -1.7
FGFR1-233	ENST00000529552	SYNE2	Q8WXH0	6885 aa	Known RBP	4.45	□□□□□ -1.7
FGFR1-233	ENST00000529552		A8MWP4	228 aa		4.45	□□□□□ -1.7
FGFR1-233	ENST00000529552	S100A1	P23297	94 aa		4.45	□□□□□ -1.7
FGFR1-233	ENST00000529552	PSMB2	P49721	201 aa		4.45	□□□□□ -1.7
FGFR1-233	ENST00000529552	ZCCHC13	Q8WW36	166 aa	Known RBP	4.45	□□□□□ -1.7
FGFR1-233	ENST00000529552	VPS25	Q9BRG1	176 aa		4.45	□□□□□ -1.7
FGFR1-233	ENST00000529552	COX6C	P09669	75 aa		4.44	□□□□□ -1.7
FGFR1-233	ENST00000529552	SPINK7	P58062	85 aa		4.44	□□□□□ -1.7
FGFR1-233	ENST00000529552	KRTAP19-6	Q3LI70	58 aa		4.44	□□□□□ -1.7
FGFR1-233	ENST00000529552	C2orf91	Q6ZV80	131 aa		4.44	□□□□□ -1.7
FGFR1-233	ENST00000529552	VAMP8	Q9BV40	100 aa		4.44	□□□□□ -1.7
FGFR1-233	ENST00000529552		J3KT08	172 aa		4.42	□□□□□ -1.7
FGFR1-233	ENST00000529552	FXYD2	P54710	66 aa		4.42	□□□□□ -1.7
FGFR1-233	ENST00000529552	UBE2V1	Q13404	147 aa		4.42	□□□□□ -1.7
FGFR1-233	ENST00000529552	LYRM7	Q5U5X0	104 aa		4.42	□□□□□ -1.7
FGFR1-233	ENST00000529552	NDUFB1	O75438	58 aa		4.4	□□□□□ -1.71
FGFR1-233	ENST00000529552	RBM3	P98179	157 aa	Known RBP	4.4	□□□□□ -1.71
FGFR1-233	ENST00000529552	WFDC13	Q8IUB5	93 aa		4.4	□□□□□ -1.71
FGFR1-233	ENST00000529552	DSCR8	Q96T75	97 aa		4.4	□□□□□ -1.71
FGFR1-233	ENST00000529552		K7ERJ3	54 aa		4.37	□□□□□ -1.71
FGFR1-233	ENST00000529552	HSD52	Q0P140	79 aa		4.37	□□□□□ -1.71
FGFR1-233	ENST00000529552		C9JAW5	83 aa		4.36	□□□□□ -1.71
FGFR1-233	ENST00000529552	SCGB1C2	P0DMR2	95 aa		4.34	□□□□□ -1.71
FGFR1-233	ENST00000529552	KRTAP6-3	Q3LI67	103 aa		4.34	□□□□□ -1.71
FGFR1-233	ENST00000529552		Q6ZQT0	140 aa		4.34	□□□□□ -1.71
FGFR1-233	ENST00000529552	C8orf17	Q9NRJ1	99 aa		4.34	□□□□□ -1.71
FGFR1-233	ENST00000529552	IGKV3D-7	A0A0C4DH55	119 aa		4.32	□□□□□ -1.72
FGFR1-233	ENST00000529552		Q6ZVQ6	151 aa		4.32	□□□□□ -1.72
FGFR1-233	ENST00000529552	BAALC-AS2	P0C853	105 aa		4.31	□□□□□ -1.72
FGFR1-233	ENST00000529552	H1FX-AS1	Q4G0G2	97 aa		4.31	□□□□□ -1.72
FGFR1-233	ENST00000529552		A0A1B0GW54	56 aa		4.3	□□□□□ -1.72
FGFR1-233	ENST00000529552	JMJD7-PLA2G4B	H0Y9G9	81 aa		4.29	□□□□□ -1.72
FGFR1-233	ENST00000529552	MT3	P25713	68 aa		4.29	□□□□□ -1.72
FGFR1-233	ENST00000529552	LOC110117498	A0A087WWA1	95 aa		4.27	□□□□□ -1.73
FGFR1-233	ENST00000529552	NDUFS5	O43920	106 aa		4.27	□□□□□ -1.73
FGFR1-233	ENST00000529552	PDE6G	P18545	87 aa		4.27	□□□□□ -1.73
FGFR1-233	ENST00000529552	TMEM254	Q8TBM7	123 aa		4.27	□□□□□ -1.73
FGFR1-233	ENST00000529552	MRPL34	Q9BQ48	92 aa	Known RBP	4.27	□□□□□ -1.73
FGFR1-233	ENST00000529552	UQCR10	Q9UDW1	63 aa		4.27	□□□□□ -1.73
FGFR1-233	ENST00000529552	ATXN8	Q156A1	80 aa		4.26	□□□□□ -1.73
FGFR1-233	ENST00000529552	PRR15	Q8IV56	129 aa		4.26	□□□□□ -1.73
FGFR1-233	ENST00000529552	NREP	Q16612	68 aa		4.25	□□□□□ -1.73
FGFR1-233	ENST00000529552	MMP24-AS1	A0A0U1RRL7	71 aa		4.24	□□□□□ -1.73
FGFR1-233	ENST00000529552	PYY3	Q5JQD4	70 aa		4.24	□□□□□ -1.73
FGFR1-233	ENST00000529552	C7orf65	Q6ZTY9	151 aa		4.24	□□□□□ -1.73
FGFR1-233	ENST00000529552	hDV103S1	A0JD37	113 aa		4.23	□□□□□ -1.73
FGFR1-233	ENST00000529552	C14orf132	Q9NPU4	83 aa		4.23	□□□□□ -1.73
FGFR1-233	ENST00000529552	FAM236A	A0A1B0GUQ0	79 aa		4.22	□□□□□ -1.73
FGFR1-233	ENST00000529552	FAM236B	A0A1B0GV22	79 aa		4.22	□□□□□ -1.73
FGFR1-233	ENST00000529552		A6NN06	94 aa		4.21	□□□□□ -1.74
FGFR1-233	ENST00000529552	NEB	P20929	6669 aa		4.21	□□□□□ -1.74
FGFR1-233	ENST00000529552		K7EQZ3	153 aa		4.19	□□□□□ -1.74
FGFR1-233	ENST00000529552		M0R143	59 aa		4.17	□□□□□ -1.74
FGFR1-233	ENST00000529552		Q5VV11	94 aa		4.17	□□□□□ -1.74
FGFR1-233	ENST00000529552	NAA38	Q9BRA0	125 aa	Known RBP	4.17	□□□□□ -1.74
FGFR1-233	ENST00000529552	KRTAP2-2	Q9BYT5	123 aa		4.17	□□□□□ -1.74
FGFR1-233	ENST00000529552	BPY2	O14599	106 aa		4.16	□□□□□ -1.74
FGFR1-233	ENST00000529552	C4orf26	Q17RF5	130 aa		4.16	□□□□□ -1.74
FGFR1-233	ENST00000529552	C5orf47	Q569G3	176 aa		4.16	□□□□□ -1.74
FGFR1-233	ENST00000529552		Q5W150	140 aa		4.15	□□□□□ -1.75
FGFR1-233	ENST00000529552	KRTAP20-1	Q3LI63	56 aa		4.14	□□□□□ -1.75
FGFR1-233	ENST00000529552	CASC2	Q6XLA1	102 aa		4.14	□□□□□ -1.75
FGFR1-233	ENST00000529552	HCG22	E2RYF7	251 aa		4.13	□□□□□ -1.75
FGFR1-233	ENST00000529552	CXCL6	P80162	114 aa		4.13	□□□□□ -1.75
FGFR1-233	ENST00000529552		S4R3F8	94 aa		4.13	□□□□□ -1.75
FGFR1-233	ENST00000529552	MT1B	P07438	61 aa		4.12	□□□□□ -1.75
FGFR1-233	ENST00000529552	CSAG1	Q6PB30	78 aa		4.12	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms