RNA–Protein interactions for RNA: ENST00000529430.1

CLP1-203, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 5 BASIC

Gene CLP1, Length 1,778 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-203ENST00000529430 LIMD2Q9BT23 127 aa7.05□□□□□ -1.28
CLP1-203ENST00000529430 KMT2CQ8NEZ4 4911 aaKnown RBP7.05□□□□□ -1.28
CLP1-203ENST00000529430 CDK2AP2O75956 126 aa7.04□□□□□ -1.28
CLP1-203ENST00000529430 TP53AIP1Q9HCN2 124 aa7.04□□□□□ -1.28
CLP1-203ENST00000529430 PKD1P98161 4303 aa7.03□□□□□ -1.28
CLP1-203ENST00000529430 SSBP3-AS1Q7Z2R9 100 aa7.03□□□□□ -1.28
CLP1-203ENST00000529430 DNAH5Q8TE73 4624 aa7.03□□□□□ -1.28
CLP1-203ENST00000529430 ANAPC11Q9NYG5 84 aa7.03□□□□□ -1.28
CLP1-203ENST00000529430 A8MUN3 132 aa7.02□□□□□ -1.29
CLP1-203ENST00000529430 CD164Q04900 197 aa7.02□□□□□ -1.29
CLP1-203ENST00000529430 RYR2Q92736 4967 aa7.01□□□□□ -1.29
CLP1-203ENST00000529430 IGLV7-46A0A075B6I9 117 aa7.01□□□□□ -1.29
CLP1-203ENST00000529430 Q8N9P0 234 aaPredicted RBP7.01□□□□□ -1.29
CLP1-203ENST00000529430 ASB16-AS1Q495Z4 193 aa7□□□□□ -1.29
CLP1-203ENST00000529430 C8orf17Q9NRJ1 99 aa7□□□□□ -1.29
CLP1-203ENST00000529430 A0A1B0GVX0 72 aa7□□□□□ -1.29
CLP1-203ENST00000529430 Q5VV11 94 aa6.99□□□□□ -1.29
CLP1-203ENST00000529430 COA5Q86WW8 74 aa6.96□□□□□ -1.3
CLP1-203ENST00000529430 DNAH8Q96JB1 4490 aa6.96□□□□□ -1.3
CLP1-203ENST00000529430 IGHV6-1A0A0B4J1U7 121 aa6.95□□□□□ -1.3
CLP1-203ENST00000529430 PMAIP1Q13794 54 aa6.95□□□□□ -1.3
CLP1-203ENST00000529430 PRR15LQ9BU68 103 aa6.95□□□□□ -1.3
CLP1-203ENST00000529430 PKHD1P08F94 4074 aa6.94□□□□□ -1.3
CLP1-203ENST00000529430 CHKB-CPT1BH3BT56 60 aa6.94□□□□□ -1.3
CLP1-203ENST00000529430 LOC101927531A0A1B0GV80 90 aa6.93□□□□□ -1.3
CLP1-203ENST00000529430 Q75L30 129 aa6.93□□□□□ -1.3
CLP1-203ENST00000529430 MRPL34Q9BQ48 92 aaKnown RBP6.93□□□□□ -1.3
CLP1-203ENST00000529430 LRP1BQ9NZR2 4599 aa6.91□□□□□ -1.3
CLP1-203ENST00000529430 SRRM2Q9UQ35 2752 aaKnown RBP6.9□□□□□ -1.3
CLP1-203ENST00000529430 C8orf87E5RJ46 101 aa6.9□□□□□ -1.3
CLP1-203ENST00000529430 PCOTHQ58A44 107 aa6.9□□□□□ -1.3
CLP1-203ENST00000529430 NDUFS5O43920 106 aa6.9□□□□□ -1.31
CLP1-203ENST00000529430 SPINK6Q6UWN8 80 aa6.88□□□□□ -1.31
CLP1-203ENST00000529430 LINC01558Q9Y6Z2 57 aa6.88□□□□□ -1.31
CLP1-203ENST00000529430 SMR3BP02814 79 aaPredicted RBP6.87□□□□□ -1.31
CLP1-203ENST00000529430 RYR3Q15413 4870 aa6.87□□□□□ -1.31
CLP1-203ENST00000529430 DYNC1H1Q14204 4646 aaKnown RBP6.87□□□□□ -1.31
CLP1-203ENST00000529430 SEC61GP60059 68 aa6.86□□□□□ -1.31
CLP1-203ENST00000529430 KRTAP13-2Q52LG2 175 aa6.86□□□□□ -1.31
CLP1-203ENST00000529430 ATP11AUNQ6ZP68 121 aa6.85□□□□□ -1.31
CLP1-203ENST00000529430 A0A087X002 238 aa6.85□□□□□ -1.31
CLP1-203ENST00000529430 A6NED7 52 aa6.85□□□□□ -1.31
CLP1-203ENST00000529430 FAM229AH3BQW9 127 aa6.84□□□□□ -1.31
CLP1-203ENST00000529430 NOTCH2NLQ7Z3S9 236 aa6.83□□□□□ -1.32
CLP1-203ENST00000529430 PLA2G1BP04054 148 aaKnown RBP6.82□□□□□ -1.32
CLP1-203ENST00000529430 KRTAP1-4P0C5Y4 121 aa6.82□□□□□ -1.32
CLP1-203ENST00000529430 CDC42SE1Q9NRR8 79 aa6.82□□□□□ -1.32
CLP1-203ENST00000529430 HRES1P13985 223 aa6.82□□□□□ -1.32
CLP1-203ENST00000529430 A8MU10 97 aa6.81□□□□□ -1.32
CLP1-203ENST00000529430 C4orf48Q5BLP8 95 aa6.81□□□□□ -1.32
CLP1-203ENST00000529430 LCA10Q71F78 164 aa6.81□□□□□ -1.32
CLP1-203ENST00000529430 LINC00313P59037 77 aa6.8□□□□□ -1.32
CLP1-203ENST00000529430 SPAG11AQ6PDA7 123 aa6.8□□□□□ -1.32
CLP1-203ENST00000529430 APOBP04114 4563 aaKnown RBP6.79□□□□□ -1.32
CLP1-203ENST00000529430 VPS13BQ7Z7G8 4022 aa6.79□□□□□ -1.32
CLP1-203ENST00000529430 SPTSSBQ8NFR3 76 aa6.78□□□□□ -1.32
CLP1-203ENST00000529430 TYMSOSQ8TAI1 123 aa6.78□□□□□ -1.32
CLP1-203ENST00000529430 SPINK1P00995 79 aa6.77□□□□□ -1.33
CLP1-203ENST00000529430 KTN1-AS1Q86SY8 53 aa6.77□□□□□ -1.33
CLP1-203ENST00000529430 KRTAP13-3Q3SY46 172 aa6.76□□□□□ -1.33
CLP1-203ENST00000529430 ACYP2P14621 99 aa6.74□□□□□ -1.33
CLP1-203ENST00000529430 Q5VSD8 79 aa6.74□□□□□ -1.33
CLP1-203ENST00000529430 A6NN06 94 aa6.73□□□□□ -1.33
CLP1-203ENST00000529430 RPS29P62273 56 aaKnown RBP6.73□□□□□ -1.33
CLP1-203ENST00000529430 KRTAP10-4P60372 401 aaPredicted RBP6.72□□□□□ -1.33
CLP1-203ENST00000529430 Q5W150 140 aa6.72□□□□□ -1.33
CLP1-203ENST00000529430 FAT1Q14517 4588 aa6.7□□□□□ -1.34
CLP1-203ENST00000529430 SPINK7P58062 85 aa6.69□□□□□ -1.34
CLP1-203ENST00000529430 LINC00304Q8N9R0 145 aa6.69□□□□□ -1.34
CLP1-203ENST00000529430 KRTAP16-1A8MUX0 517 aa6.68□□□□□ -1.34
CLP1-203ENST00000529430 Q8N1X5 172 aa6.67□□□□□ -1.34
CLP1-203ENST00000529430 PRR26Q8N8Z3 221 aa6.67□□□□□ -1.34
CLP1-203ENST00000529430 DMAC1Q96GE9 116 aa6.67□□□□□ -1.34
CLP1-203ENST00000529430 HSPG2P98160 4391 aa6.65□□□□□ -1.34
CLP1-203ENST00000529430 IGKV2-30P06310 120 aa6.64□□□□□ -1.35
CLP1-203ENST00000529430 C7orf65Q6ZTY9 151 aa6.64□□□□□ -1.35
CLP1-203ENST00000529430 EPPK1P58107 5090 aaKnown RBP6.62□□□□□ -1.35
CLP1-203ENST00000529430 RBM12B-AS1Q9P1G2 102 aa6.61□□□□□ -1.35
CLP1-203ENST00000529430 RYR1P21817 5038 aa6.61□□□□□ -1.35
CLP1-203ENST00000529430 RETNLBQ9BQ08 111 aa6.6□□□□□ -1.35
CLP1-203ENST00000529430 A0A1B0GU69 56 aa6.57□□□□□ -1.36
CLP1-203ENST00000529430 KIAA1109Q2LD37 5005 aa6.56□□□□□ -1.36
CLP1-203ENST00000529430 SPATA8Q6RVD6 105 aa6.54□□□□□ -1.36
CLP1-203ENST00000529430 IGKV2D-30A0A075B6S6 120 aa6.53□□□□□ -1.36
CLP1-203ENST00000529430 PKHD1L1Q86WI1 4243 aa6.52□□□□□ -1.37
CLP1-203ENST00000529430 KRTAP17-1Q9BYP8 105 aa6.52□□□□□ -1.37
CLP1-203ENST00000529430 KRTAP10-8P60410 259 aa6.5□□□□□ -1.37
CLP1-203ENST00000529430 UQCR11O14957 56 aa6.49□□□□□ -1.37
CLP1-203ENST00000529430 A8MUU9 505 aa6.48□□□□□ -1.37
CLP1-203ENST00000529430 C20orf166-AS1Q96NR2 134 aa6.48□□□□□ -1.37
CLP1-203ENST00000529430 MIR22HGQ0VDD5 57 aa6.47□□□□□ -1.37
CLP1-203ENST00000529430 FLG2Q5D862 2391 aaPredicted RBP6.44□□□□□ -1.38
CLP1-203ENST00000529430 C9orf92A6NGG3 77 aa6.43□□□□□ -1.38
CLP1-203ENST00000529430 KRTAP4-5Q9BYR2 181 aa6.43□□□□□ -1.38
CLP1-203ENST00000529430 LRP1Q07954 4544 aaKnown RBP6.43□□□□□ -1.38
CLP1-203ENST00000529430 BIRC6Q9NR09 4857 aa6.41□□□□□ -1.38
CLP1-203ENST00000529430 MT1HL1P0DM35 61 aa6.4□□□□□ -1.38
CLP1-203ENST00000529430 FAT3Q8TDW7 4589 aa6.4□□□□□ -1.39
CLP1-203ENST00000529430 TNXBP22105 4242 aa6.39□□□□□ -1.39
CLP1-203ENST00000529430 MYCBP2O75592 4640 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms