RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 TIMM17BO60830 172 aa2.31□□□□□ -2.04
CSDE1-212ENST00000529046 LEPROTL1O95214 131 aa2.31□□□□□ -2.04
CSDE1-212ENST00000529046 S100A7L2Q5SY68 101 aa2.31□□□□□ -2.04
CSDE1-212ENST00000529046 SPANXCQ9NY87 97 aa2.31□□□□□ -2.04
CSDE1-212ENST00000529046 CRCT1Q9UGL9 99 aa2.31□□□□□ -2.04
CSDE1-212ENST00000529046 HSPB8Q9UJY1 196 aa2.31□□□□□ -2.04
CSDE1-212ENST00000529046 TRBV7-6A0A0J9YX20 115 aa2.3□□□□□ -2.04
CSDE1-212ENST00000529046 H3BQ85 93 aa2.3□□□□□ -2.04
CSDE1-212ENST00000529046 DPM2O94777 84 aa2.3□□□□□ -2.04
CSDE1-212ENST00000529046 IGKCP01834 107 aa2.3□□□□□ -2.04
CSDE1-212ENST00000529046 SPANXDQ9BXN6 97 aa2.3□□□□□ -2.04
CSDE1-212ENST00000529046 LAMTOR3Q9UHA4 124 aa2.3□□□□□ -2.04
CSDE1-212ENST00000529046 TRGC2P03986 189 aa2.29□□□□□ -2.04
CSDE1-212ENST00000529046 LGALS3P17931 250 aaKnown RBP2.29□□□□□ -2.04
CSDE1-212ENST00000529046 MT1HP80294 61 aa2.29□□□□□ -2.04
CSDE1-212ENST00000529046 SOSTDC1Q6X4U4 206 aa2.29□□□□□ -2.04
CSDE1-212ENST00000529046 LCA10Q71F78 164 aa2.29□□□□□ -2.04
CSDE1-212ENST00000529046 KTN1-AS1Q86SY8 53 aa2.29□□□□□ -2.04
CSDE1-212ENST00000529046 TTTY13Q9BZ97 58 aa2.29□□□□□ -2.04
CSDE1-212ENST00000529046 TEX49A0A1B0GTD5 131 aa2.28□□□□□ -2.04
CSDE1-212ENST00000529046 J3KT08 172 aa2.28□□□□□ -2.04
CSDE1-212ENST00000529046 ELOF1P60002 83 aaKnown RBP2.28□□□□□ -2.04
CSDE1-212ENST00000529046 RPS28P62857 69 aaKnown RBP2.28□□□□□ -2.04
CSDE1-212ENST00000529046 C9orf153Q5TBE3 101 aa2.28□□□□□ -2.04
CSDE1-212ENST00000529046 LINC00308Q8TCZ7 52 aa2.28□□□□□ -2.04
CSDE1-212ENST00000529046 PRO1933Q9H354 126 aa2.28□□□□□ -2.04
CSDE1-212ENST00000529046 IGLV5-48A0A075B6I7 105 aa2.27□□□□□ -2.05
CSDE1-212ENST00000529046 A0A1B0GX51 115 aa2.27□□□□□ -2.05
CSDE1-212ENST00000529046 AKR1D1P51857 326 aa2.27□□□□□ -2.05
CSDE1-212ENST00000529046 HIST1H4AP62805 103 aaKnown RBP2.27□□□□□ -2.05
CSDE1-212ENST00000529046 PCOTHQ58A44 107 aa2.27□□□□□ -2.05
CSDE1-212ENST00000529046 COPS9Q8WXC6 57 aa2.27□□□□□ -2.05
CSDE1-212ENST00000529046 SYS1-DBNDD2H3BUS1 97 aa2.26□□□□□ -2.05
CSDE1-212ENST00000529046 H7C2G1 150 aa2.26□□□□□ -2.05
CSDE1-212ENST00000529046 TAX1BP3O14907 124 aa2.26□□□□□ -2.05
CSDE1-212ENST00000529046 IFITM1P13164 125 aa2.26□□□□□ -2.05
CSDE1-212ENST00000529046 FABP4P15090 132 aa2.26□□□□□ -2.05
CSDE1-212ENST00000529046 COX7BP24311 80 aa2.26□□□□□ -2.05
CSDE1-212ENST00000529046 RPL37P61927 97 aaKnown RBP2.26□□□□□ -2.05
CSDE1-212ENST00000529046 LINC01545Q5VT33 79 aa2.26□□□□□ -2.05
CSDE1-212ENST00000529046 PMCHL2Q9BQD1 86 aa2.26□□□□□ -2.05
CSDE1-212ENST00000529046 C2orf91Q6ZV80 131 aa2.25□□□□□ -2.05
CSDE1-212ENST00000529046 NHP2Q9NX24 153 aaKnown RBP2.25□□□□□ -2.05
CSDE1-212ENST00000529046 ZNF815PA8K554 130 aa2.24□□□□□ -2.05
CSDE1-212ENST00000529046 TCL1BO95988 128 aa2.24□□□□□ -2.05
CSDE1-212ENST00000529046 NPC2P61916 151 aa2.24□□□□□ -2.05
CSDE1-212ENST00000529046 LINC01554Q52M75 96 aa2.24□□□□□ -2.05
CSDE1-212ENST00000529046 HRCT1Q6UXD1 115 aa2.24□□□□□ -2.05
CSDE1-212ENST00000529046 TRAV13-2A0A0B4J235 113 aa2.23□□□□□ -2.05
CSDE1-212ENST00000529046 C9orf92A6NGG3 77 aa2.23□□□□□ -2.05
CSDE1-212ENST00000529046 Q6JHZ5 121 aa2.23□□□□□ -2.05
CSDE1-212ENST00000529046 PRR15Q8IV56 129 aa2.23□□□□□ -2.05
CSDE1-212ENST00000529046 PPDPFLQ8WWR9 84 aa2.23□□□□□ -2.05
CSDE1-212ENST00000529046 TMEM256-PLSCR3K7ERE1 68 aa2.22□□□□□ -2.05
CSDE1-212ENST00000529046 HIST1H2BKO60814 126 aa2.22□□□□□ -2.05
CSDE1-212ENST00000529046 HIST1H2BJP06899 126 aa2.22□□□□□ -2.05
CSDE1-212ENST00000529046 C3orf79P0CE67 100 aa2.22□□□□□ -2.05
CSDE1-212ENST00000529046 SPINT4Q6UDR6 99 aa2.22□□□□□ -2.05
CSDE1-212ENST00000529046 HIST3H2BBQ8N257 126 aa2.22□□□□□ -2.05
CSDE1-212ENST00000529046 DEFB105AQ8NG35 78 aa2.22□□□□□ -2.05
CSDE1-212ENST00000529046 VPS25Q9BRG1 176 aa2.22□□□□□ -2.05
CSDE1-212ENST00000529046 FLGP20930 4061 aaPredicted RBP2.22□□□□□ -2.05
CSDE1-212ENST00000529046 A0A1B0GU33 70 aa2.21□□□□□ -2.06
CSDE1-212ENST00000529046 H3BPC8 53 aa2.21□□□□□ -2.06
CSDE1-212ENST00000529046 H3BT86 120 aa2.21□□□□□ -2.06
CSDE1-212ENST00000529046 M0R2T5 61 aa2.21□□□□□ -2.06
CSDE1-212ENST00000529046 MUSTN1Q8IVN3 82 aa2.21□□□□□ -2.06
CSDE1-212ENST00000529046 HIST1H2BLQ99880 126 aa2.21□□□□□ -2.06
CSDE1-212ENST00000529046 TRBV7-7A0A0K0K1E9 115 aa2.2□□□□□ -2.06
CSDE1-212ENST00000529046 hADV29S1A0JD25 119 aa2.2□□□□□ -2.06
CSDE1-212ENST00000529046 C20orf202A1L168 122 aa2.2□□□□□ -2.06
CSDE1-212ENST00000529046 C9JAW5 83 aa2.2□□□□□ -2.06
CSDE1-212ENST00000529046 F8WEM9 126 aa2.2□□□□□ -2.06
CSDE1-212ENST00000529046 LINC00575Q6W349 94 aa2.2□□□□□ -2.06
CSDE1-212ENST00000529046 COX6B2Q6YFQ2 88 aa2.2□□□□□ -2.06
CSDE1-212ENST00000529046 ATP11AUNQ6ZP68 121 aa2.2□□□□□ -2.06
CSDE1-212ENST00000529046 C1orf64Q8NEQ6 169 aa2.2□□□□□ -2.06
CSDE1-212ENST00000529046 SMIM11BQ8TCY0 68 aa2.2□□□□□ -2.06
CSDE1-212ENST00000529046 CLEC2BQ92478 149 aa2.2□□□□□ -2.06
CSDE1-212ENST00000529046 S100A1P23297 94 aa2.19□□□□□ -2.06
CSDE1-212ENST00000529046 KRTAP25-1Q3LHN0 102 aa2.19□□□□□ -2.06
CSDE1-212ENST00000529046 OCIAD2Q56VL3 154 aa2.19□□□□□ -2.06
CSDE1-212ENST00000529046 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.19□□□□□ -2.06
CSDE1-212ENST00000529046 C20orf166-AS1Q96NR2 134 aa2.19□□□□□ -2.06
CSDE1-212ENST00000529046 A0A0G2JQZ4 141 aa2.18□□□□□ -2.06
CSDE1-212ENST00000529046 FABP2P12104 132 aa2.18□□□□□ -2.06
CSDE1-212ENST00000529046 BVES-AS1Q5T3Y7 98 aa2.18□□□□□ -2.06
CSDE1-212ENST00000529046 Q6ZQY7 126 aa2.18□□□□□ -2.06
CSDE1-212ENST00000529046 USH2AO75445 5202 aa2.17□□□□□ -2.06
CSDE1-212ENST00000529046 A0A1B0GV90 55 aa2.17□□□□□ -2.06
CSDE1-212ENST00000529046 KRTDAPP60985 99 aa2.17□□□□□ -2.06
CSDE1-212ENST00000529046 TEN1Q86WV5 123 aa2.17□□□□□ -2.06
CSDE1-212ENST00000529046 TRAV7A0A075B6U4 112 aa2.16□□□□□ -2.06
CSDE1-212ENST00000529046 SNCGO76070 127 aa2.16□□□□□ -2.06
CSDE1-212ENST00000529046 OBSCN-AS1Q96MR7 158 aa2.16□□□□□ -2.06
CSDE1-212ENST00000529046 SNHG12Q9BXW3 62 aa2.16□□□□□ -2.06
CSDE1-212ENST00000529046 TRBV20-1A0A075B6N2 111 aa2.15□□□□□ -2.07
CSDE1-212ENST00000529046 H0YGX0 51 aa2.15□□□□□ -2.07
CSDE1-212ENST00000529046 R4GN34 69 aa2.15□□□□□ -2.07
CSDE1-212ENST00000529046 SSPOA2VEC9 5147 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms