RNA–Protein interactions for RNA: ENST00000528201.1

PACSIN3-204, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 864 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-204ENST00000528201 C8orf87E5RJ46 101 aa12□□□□□ -0.49
PACSIN3-204ENST00000528201 Q6ZQT0 140 aa12□□□□□ -0.49
PACSIN3-204ENST00000528201 M0R143 59 aa11.96□□□□□ -0.49
PACSIN3-204ENST00000528201 ATXN8Q156A1 80 aa11.96□□□□□ -0.49
PACSIN3-204ENST00000528201 FAM236DA0A1B0GTK5 79 aa11.95□□□□□ -0.5
PACSIN3-204ENST00000528201 FAM236CP0DP71 79 aa11.95□□□□□ -0.5
PACSIN3-204ENST00000528201 USH2AO75445 5202 aa11.94□□□□□ -0.5
PACSIN3-204ENST00000528201 J3KT08 172 aa11.94□□□□□ -0.5
PACSIN3-204ENST00000528201 LOC110117498A0A087WWA1 95 aa11.9□□□□□ -0.5
PACSIN3-204ENST00000528201 C21orf62-AS1Q17RA5 79 aa11.9□□□□□ -0.5
PACSIN3-204ENST00000528201 ZCCHC13Q8WW36 166 aaKnown RBP11.89□□□□□ -0.51
PACSIN3-204ENST00000528201 RBM12B-AS1Q9P1G2 102 aa11.89□□□□□ -0.51
PACSIN3-204ENST00000528201 MT2AP02795 61 aa11.88□□□□□ -0.51
PACSIN3-204ENST00000528201 SSPOA2VEC9 5147 aa11.87□□□□□ -0.51
PACSIN3-204ENST00000528201 JMJD7-PLA2G4BH0Y9G9 81 aa11.87□□□□□ -0.51
PACSIN3-204ENST00000528201 SMIM6P0DI80 62 aa11.86□□□□□ -0.51
PACSIN3-204ENST00000528201 Q8N9P0 234 aaPredicted RBP11.85□□□□□ -0.51
PACSIN3-204ENST00000528201 C14orf132Q9NPU4 83 aa11.85□□□□□ -0.51
PACSIN3-204ENST00000528201 IGKV3D-7A0A0C4DH55 119 aa11.83□□□□□ -0.52
PACSIN3-204ENST00000528201 A8MWP4 228 aa11.83□□□□□ -0.52
PACSIN3-204ENST00000528201 C8orf17Q9NRJ1 99 aa11.83□□□□□ -0.52
PACSIN3-204ENST00000528201 NDUFB1O75438 58 aa11.82□□□□□ -0.52
PACSIN3-204ENST00000528201 SPINK7P58062 85 aa11.82□□□□□ -0.52
PACSIN3-204ENST00000528201 A0A1B0GW54 56 aa11.8□□□□□ -0.52
PACSIN3-204ENST00000528201 MT1FP04733 61 aa11.8□□□□□ -0.52
PACSIN3-204ENST00000528201 PDE6GP18545 87 aa11.79□□□□□ -0.52
PACSIN3-204ENST00000528201 BATFQ16520 125 aa11.76□□□□□ -0.53
PACSIN3-204ENST00000528201 LYRM7Q5U5X0 104 aa11.73□□□□□ -0.53
PACSIN3-204ENST00000528201 PRR15Q8IV56 129 aa11.72□□□□□ -0.53
PACSIN3-204ENST00000528201 Q6ZVQ6 151 aa11.71□□□□□ -0.53
PACSIN3-204ENST00000528201 TSTD3H0UI37 97 aa11.7□□□□□ -0.54
PACSIN3-204ENST00000528201 NREPQ16612 68 aa11.69□□□□□ -0.54
PACSIN3-204ENST00000528201 KRTAP9-3Q9BYQ3 159 aa11.69□□□□□ -0.54
PACSIN3-204ENST00000528201 LCE2BO14633 110 aa11.68□□□□□ -0.54
PACSIN3-204ENST00000528201 MTURNQ8N3F0 131 aa11.67□□□□□ -0.54
PACSIN3-204ENST00000528201 MMP24-AS1A0A0U1RRL7 71 aa11.66□□□□□ -0.54
PACSIN3-204ENST00000528201 KRTAP10-10P60014 251 aa11.66□□□□□ -0.54
PACSIN3-204ENST00000528201 WFDC13Q8IUB5 93 aa11.66□□□□□ -0.54
PACSIN3-204ENST00000528201 C9orf118A6NHY6 69 aa11.65□□□□□ -0.54
PACSIN3-204ENST00000528201 TAX1BP3O14907 124 aa11.65□□□□□ -0.54
PACSIN3-204ENST00000528201 H3BT86 120 aa11.61□□□□□ -0.55
PACSIN3-204ENST00000528201 LOC105371267A0A1B0GV96 52 aa11.6□□□□□ -0.55
PACSIN3-204ENST00000528201 A0A1W2PPM0 123 aa11.6□□□□□ -0.55
PACSIN3-204ENST00000528201 K7EQZ3 153 aa11.6□□□□□ -0.55
PACSIN3-204ENST00000528201 TMEM254Q8TBM7 123 aa11.6□□□□□ -0.55
PACSIN3-204ENST00000528201 MRPL34Q9BQ48 92 aaKnown RBP11.6□□□□□ -0.55
PACSIN3-204ENST00000528201 FCGBPQ9Y6R7 5405 aaPredicted RBP11.57□□□□□ -0.56
PACSIN3-204ENST00000528201 hDV103S1A0JD37 113 aa11.54□□□□□ -0.56
PACSIN3-204ENST00000528201 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.54□□□□□ -0.56
PACSIN3-204ENST00000528201 KRTAP19-1Q8IUB9 90 aa11.49□□□□□ -0.57
PACSIN3-204ENST00000528201 BPY2O14599 106 aa11.47□□□□□ -0.57
PACSIN3-204ENST00000528201 NDUFS5O43920 106 aa11.47□□□□□ -0.57
PACSIN3-204ENST00000528201 Q5W150 140 aa11.45□□□□□ -0.58
PACSIN3-204ENST00000528201 Q8N9L7 120 aa11.45□□□□□ -0.58
PACSIN3-204ENST00000528201 SMCPP49901 116 aaPredicted RBP11.44□□□□□ -0.58
PACSIN3-204ENST00000528201 SPCS1Q9Y6A9 102 aa11.42□□□□□ -0.58
PACSIN3-204ENST00000528201 KRTAP9-7A8MTY7 169 aa11.39□□□□□ -0.59
PACSIN3-204ENST00000528201 IGKV2D-30A0A075B6S6 120 aa11.38□□□□□ -0.59
PACSIN3-204ENST00000528201 IGKV2-30P06310 120 aa11.38□□□□□ -0.59
PACSIN3-204ENST00000528201 H1FX-AS1Q4G0G2 97 aa11.38□□□□□ -0.59
PACSIN3-204ENST00000528201 CASC2Q6XLA1 102 aa11.34□□□□□ -0.59
PACSIN3-204ENST00000528201 PRO0461Q9UI25 63 aa11.33□□□□□ -0.6
PACSIN3-204ENST00000528201 C7orf65Q6ZTY9 151 aa11.32□□□□□ -0.6
PACSIN3-204ENST00000528201 HCG22E2RYF7 251 aa11.31□□□□□ -0.6
PACSIN3-204ENST00000528201 LINC00846Q9NV44 126 aa11.29□□□□□ -0.6
PACSIN3-204ENST00000528201 COL5A1-AS1Q5SY13 56 aa11.25□□□□□ -0.61
PACSIN3-204ENST00000528201 KRTAP19-6Q3LI70 58 aa11.23□□□□□ -0.61
PACSIN3-204ENST00000528201 K7EP34 96 aa11.22□□□□□ -0.61
PACSIN3-204ENST00000528201 C4orf26Q17RF5 130 aa11.22□□□□□ -0.61
PACSIN3-204ENST00000528201 CXCL6P80162 114 aa11.2□□□□□ -0.62
PACSIN3-204ENST00000528201 UBL5Q9BZL1 73 aa11.19□□□□□ -0.62
PACSIN3-204ENST00000528201 MACF1Q9UPN3 7388 aaKnown RBP11.18□□□□□ -0.62
PACSIN3-204ENST00000528201 KRTAP3-1Q9BYR8 98 aa11.12□□□□□ -0.63
PACSIN3-204ENST00000528201 SYNE2Q8WXH0 6885 aaKnown RBP11.07□□□□□ -0.64
PACSIN3-204ENST00000528201 C5orf47Q569G3 176 aa11.03□□□□□ -0.64
PACSIN3-204ENST00000528201 ETDBQ3ZM63 59 aa10.99□□□□□ -0.65
PACSIN3-204ENST00000528201 GTF2H5Q6ZYL4 71 aa10.99□□□□□ -0.65
PACSIN3-204ENST00000528201 C1orf64Q8NEQ6 169 aa10.97□□□□□ -0.65
PACSIN3-204ENST00000528201 F8W1H4 67 aa10.95□□□□□ -0.66
PACSIN3-204ENST00000528201 S4R3F8 94 aa10.95□□□□□ -0.66
PACSIN3-204ENST00000528201 TP53AIP1Q9HCN2 124 aa10.93□□□□□ -0.66
PACSIN3-204ENST00000528201 LCA10Q71F78 164 aa10.92□□□□□ -0.66
PACSIN3-204ENST00000528201 PCP4L1A6NKN8 68 aa10.9□□□□□ -0.66
PACSIN3-204ENST00000528201 CSAG1Q6PB30 78 aa10.86□□□□□ -0.67
PACSIN3-204ENST00000528201 FAM236AA0A1B0GUQ0 79 aa10.85□□□□□ -0.67
PACSIN3-204ENST00000528201 FAM236BA0A1B0GV22 79 aa10.85□□□□□ -0.67
PACSIN3-204ENST00000528201 MT1BP07438 61 aa10.81□□□□□ -0.68
PACSIN3-204ENST00000528201 CYP4F30PQ9H0H9 118 aa10.81□□□□□ -0.68
PACSIN3-204ENST00000528201 KRTAP3-3Q9BYR6 98 aa10.8□□□□□ -0.68
PACSIN3-204ENST00000528201 SPRR2GQ9BYE4 73 aa10.77□□□□□ -0.69
PACSIN3-204ENST00000528201 A0A087WVE0 104 aa10.75□□□□□ -0.69
PACSIN3-204ENST00000528201 KRTAP19-8Q3LI54 63 aa10.73□□□□□ -0.69
PACSIN3-204ENST00000528201 TRAV22A0A0B4J277 110 aa10.72□□□□□ -0.69
PACSIN3-204ENST00000528201 KRTAP6-3Q3LI67 103 aa10.72□□□□□ -0.69
PACSIN3-204ENST00000528201 Q5VV11 94 aa10.69□□□□□ -0.7
PACSIN3-204ENST00000528201 LOC101927531A0A1B0GV80 90 aa10.67□□□□□ -0.7
PACSIN3-204ENST00000528201 ACYP1P07311 99 aa10.67□□□□□ -0.7
PACSIN3-204ENST00000528201 KLKP1Q107X0 134 aa10.67□□□□□ -0.7
PACSIN3-204ENST00000528201 FAM240AA0A1B0GVK7 77 aa10.65□□□□□ -0.7
PACSIN3-204ENST00000528201 A6NN06 94 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms