RNA–Protein interactions for RNA: ENST00000527062.5

RNPC3-205, Transcript of RNA binding region (RNP1, RRM) containing 3, humanhuman

TSL 5

Gene RNPC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNPC3-205ENST00000527062 HECTD1Q9ULT8 2610 aa0.34□□□□□ -2.36
RNPC3-205ENST00000527062 IGSF10Q6WRI0 2623 aa0.33□□□□□ -2.36
RNPC3-205ENST00000527062 KMT2DO14686 5537 aa0.33□□□□□ -2.36
RNPC3-205ENST00000527062 AKAP13Q12802 2813 aa0.32□□□□□ -2.36
RNPC3-205ENST00000527062 GPR98Q8WXG9 6306 aa0.32□□□□□ -2.36
RNPC3-205ENST00000527062 NBASA2RRP1 2371 aa0.32□□□□□ -2.36
RNPC3-205ENST00000527062 NFAT5O94916 1531 aa0.32□□□□□ -2.36
RNPC3-205ENST00000527062 HUWE1Q7Z6Z7 4374 aaKnown RBP0.32□□□□□ -2.36
RNPC3-205ENST00000527062 PRRC2CQ9Y520 2896 aaKnown RBP0.31□□□□□ -2.36
RNPC3-205ENST00000527062 ATP7AQ04656 1500 aa0.31□□□□□ -2.36
RNPC3-205ENST00000527062 SAMD9LQ8IVG5 1584 aa0.31□□□□□ -2.36
RNPC3-205ENST00000527062 SETXQ7Z333 2677 aaKnown RBP0.3□□□□□ -2.36
RNPC3-205ENST00000527062 MT1AP04731 61 aa0.3□□□□□ -2.36
RNPC3-205ENST00000527062 DMBT1Q9UGM3 2413 aaPredicted RBP0.3□□□□□ -2.36
RNPC3-205ENST00000527062 FLNBO75369 2602 aaKnown RBP0.3□□□□□ -2.36
RNPC3-205ENST00000527062 TNRC18O15417 2968 aaPredicted RBP0.3□□□□□ -2.36
RNPC3-205ENST00000527062 CACNA1AO00555 2505 aa0.29□□□□□ -2.36
RNPC3-205ENST00000527062 CLTCL1P53675 1640 aa0.29□□□□□ -2.36
RNPC3-205ENST00000527062 CREBBPQ92793 2442 aa0.29□□□□□ -2.36
RNPC3-205ENST00000527062 FAT4Q6V0I7 4981 aa0.29□□□□□ -2.36
RNPC3-205ENST00000527062 LPAP08519 4548 aa0.28□□□□□ -2.36
RNPC3-205ENST00000527062 MYCBP2O75592 4640 aa0.28□□□□□ -2.36
RNPC3-205ENST00000527062 PRKDCP78527 4128 aaKnown RBP0.27□□□□□ -2.37
RNPC3-205ENST00000527062 KRTAP6-2Q3LI66 62 aa0.27□□□□□ -2.37
RNPC3-205ENST00000527062 CEP290O15078 2479 aa0.27□□□□□ -2.37
RNPC3-205ENST00000527062 POLR2KP53803 58 aaKnown RBP0.26□□□□□ -2.37
RNPC3-205ENST00000527062 TOP2AP11388 1531 aaKnown RBP0.26□□□□□ -2.37
RNPC3-205ENST00000527062 SPART-AS1P0CW21 52 aa0.25□□□□□ -2.37
RNPC3-205ENST00000527062 CLPSL2Q6UWE3 100 aa0.25□□□□□ -2.37
RNPC3-205ENST00000527062 SPTBN4Q9H254 2564 aa0.24□□□□□ -2.37
RNPC3-205ENST00000527062 SONP18583 2426 aaKnown RBP0.24□□□□□ -2.37
RNPC3-205ENST00000527062 SPRR2EP22531 72 aa0.24□□□□□ -2.37
RNPC3-205ENST00000527062 LYSTQ99698 3801 aa0.23□□□□□ -2.37
RNPC3-205ENST00000527062 SPRR2GQ9BYE4 73 aa0.23□□□□□ -2.37
RNPC3-205ENST00000527062 MTORP42345 2549 aa0.23□□□□□ -2.37
RNPC3-205ENST00000527062 SYNE2Q8WXH0 6885 aaKnown RBP0.22□□□□□ -2.37
RNPC3-205ENST00000527062 SNRPGP62308 76 aaKnown RBP0.22□□□□□ -2.37
RNPC3-205ENST00000527062 DCHS2Q6V1P9 2916 aa0.22□□□□□ -2.37
RNPC3-205ENST00000527062 KMT2AQ03164 3969 aa0.21□□□□□ -2.38
RNPC3-205ENST00000527062 MAST4O15021 2626 aa0.21□□□□□ -2.38
RNPC3-205ENST00000527062 HMCN2Q8NDA2 5059 aa0.21□□□□□ -2.38
RNPC3-205ENST00000527062 COL7A1Q02388 2944 aa0.21□□□□□ -2.38
RNPC3-205ENST00000527062 FSIP2Q5CZC0 6907 aa0.2□□□□□ -2.38
RNPC3-205ENST00000527062 NSD1Q96L73 2696 aaPredicted RBP0.2□□□□□ -2.38
RNPC3-205ENST00000527062 HSPG2P98160 4391 aa0.2□□□□□ -2.38
RNPC3-205ENST00000527062 NF1P21359 2839 aa0.19□□□□□ -2.38
RNPC3-205ENST00000527062 SPRR2FQ96RM1 72 aa0.18□□□□□ -2.38
RNPC3-205ENST00000527062 SPG11Q96JI7 2443 aa0.17□□□□□ -2.38
RNPC3-205ENST00000527062 SRRM2Q9UQ35 2752 aaKnown RBP0.17□□□□□ -2.38
RNPC3-205ENST00000527062 STAB1Q9NY15 2570 aa0.16□□□□□ -2.38
RNPC3-205ENST00000527062 FLNAP21333 2647 aaKnown RBP0.16□□□□□ -2.38
RNPC3-205ENST00000527062 KRTAP8-1Q8IUC2 63 aa0.15□□□□□ -2.39
RNPC3-205ENST00000527062 TOMM7Q9P0U1 55 aa0.15□□□□□ -2.39
RNPC3-205ENST00000527062 ACACAQ13085 2346 aa0.15□□□□□ -2.39
RNPC3-205ENST00000527062 FLNCQ14315 2725 aa0.15□□□□□ -2.39
RNPC3-205ENST00000527062 RPL39P62891 51 aaKnown RBP0.14□□□□□ -2.39
RNPC3-205ENST00000527062 SETD2Q9BYW2 2564 aaPredicted RBP0.14□□□□□ -2.39
RNPC3-205ENST00000527062 COL6A3P12111 3177 aa0.13□□□□□ -2.39
RNPC3-205ENST00000527062 HECTD4Q9Y4D8 3996 aa0.13□□□□□ -2.39
RNPC3-205ENST00000527062 CUBNO60494 3623 aa0.13□□□□□ -2.39
RNPC3-205ENST00000527062 MACF1Q9UPN3 7388 aaKnown RBP0.13□□□□□ -2.39
RNPC3-205ENST00000527062 DMXL1Q9Y485 3027 aa0.12□□□□□ -2.39
RNPC3-205ENST00000527062 SVEP1Q4LDE5 3571 aa0.12□□□□□ -2.39
RNPC3-205ENST00000527062 COL6A5A8TX70 2615 aa0.12□□□□□ -2.39
RNPC3-205ENST00000527062 LRP1BQ9NZR2 4599 aa0.11□□□□□ -2.39
RNPC3-205ENST00000527062 GCN1Q92616 2671 aaKnown RBP0.1□□□□□ -2.39
RNPC3-205ENST00000527062 A0A0C4DFX4 3053 aa0.1□□□□□ -2.39
RNPC3-205ENST00000527062 ZZEF1O43149 2961 aa0.09□□□□□ -2.39
RNPC3-205ENST00000527062 FAM186AA6NE01 2351 aa0.09□□□□□ -2.39
RNPC3-205ENST00000527062 ZANQ9Y493 2812 aa0.09□□□□□ -2.39
RNPC3-205ENST00000527062 DEFB1P60022 68 aa0.09□□□□□ -2.4
RNPC3-205ENST00000527062 TENM2Q9NT68 2774 aa0.09□□□□□ -2.4
RNPC3-205ENST00000527062 VPS13BQ7Z7G8 4022 aa0.08□□□□□ -2.4
RNPC3-205ENST00000527062 LRP2P98164 4655 aa0.08□□□□□ -2.4
RNPC3-205ENST00000527062 ANKRD11Q6UB99 2663 aaPredicted RBP0.08□□□□□ -2.4
RNPC3-205ENST00000527062 LRRK2Q5S007 2527 aa0.08□□□□□ -2.4
RNPC3-205ENST00000527062 FLGP20930 4061 aaPredicted RBP0.07□□□□□ -2.4
RNPC3-205ENST00000527062 SMR3BP02814 79 aaPredicted RBP0.07□□□□□ -2.4
RNPC3-205ENST00000527062 RPL39LQ96EH5 51 aaKnown RBP0.07□□□□□ -2.4
RNPC3-205ENST00000527062 PDZD2O15018 2839 aa0.07□□□□□ -2.4
RNPC3-205ENST00000527062 ACACBO00763 2458 aa0.07□□□□□ -2.4
RNPC3-205ENST00000527062 ANKHD1Q8IWZ3 2542 aaKnown RBP0.07□□□□□ -2.4
RNPC3-205ENST00000527062 LINC01590Q5TEZ4 76 aa0.06□□□□□ -2.4
RNPC3-205ENST00000527062 UTP20O75691 2785 aaKnown RBP0.06□□□□□ -2.4
RNPC3-205ENST00000527062 TGP01266 2768 aa0.06□□□□□ -2.4
RNPC3-205ENST00000527062 NBEAL2Q6ZNJ1 2754 aa0.06□□□□□ -2.4
RNPC3-205ENST00000527062 EPG5Q9HCE0 2579 aa0.05□□□□□ -2.4
RNPC3-205ENST00000527062 SACSQ9NZJ4 4579 aa0.05□□□□□ -2.4
RNPC3-205ENST00000527062 KRTAP19-5Q3LI72 72 aa0.05□□□□□ -2.4
RNPC3-205ENST00000527062 MROH2BQ7Z745 1585 aa0.05□□□□□ -2.4
RNPC3-205ENST00000527062 PKD1P98161 4303 aa0.05□□□□□ -2.4
RNPC3-205ENST00000527062 RIF1Q5UIP0 2472 aaKnown RBP0.05□□□□□ -2.4
RNPC3-205ENST00000527062 FASNP49327 2511 aaKnown RBP0.05□□□□□ -2.4
RNPC3-205ENST00000527062 SSPOA2VEC9 5147 aa0.04□□□□□ -2.4
RNPC3-205ENST00000527062 TACC2O95359 2948 aa0.04□□□□□ -2.4
RNPC3-205ENST00000527062 NBEAQ8NFP9 2946 aa0.04□□□□□ -2.4
RNPC3-205ENST00000527062 HIVEP1P15822 2718 aa0.03□□□□□ -2.4
RNPC3-205ENST00000527062 LEAP2Q969E1 77 aa0.02□□□□□ -2.41
RNPC3-205ENST00000527062 NBEAL1Q6ZS30 2694 aa0.01□□□□□ -2.41
RNPC3-205ENST00000527062 MT1HP80294 61 aa0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms