RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 IGKV4-1P06312 121 aa5.82□□□□□ -1.48
NEDD8-205ENST00000527046 KRTAP4-1Q9BYQ7 146 aa5.81□□□□□ -1.48
NEDD8-205ENST00000527046 MUC17Q685J3 4493 aa5.8□□□□□ -1.48
NEDD8-205ENST00000527046 KRTAP16-1A8MUX0 517 aa5.8□□□□□ -1.48
NEDD8-205ENST00000527046 C21orf62-AS1Q17RA5 79 aa5.8□□□□□ -1.48
NEDD8-205ENST00000527046 LINC00846Q9NV44 126 aa5.78□□□□□ -1.48
NEDD8-205ENST00000527046 DSCR10P59022 87 aa5.77□□□□□ -1.49
NEDD8-205ENST00000527046 IGKV3D-7A0A0C4DH55 119 aa5.76□□□□□ -1.49
NEDD8-205ENST00000527046 NREPQ16612 68 aa5.76□□□□□ -1.49
NEDD8-205ENST00000527046 Q6ZVQ6 151 aa5.76□□□□□ -1.49
NEDD8-205ENST00000527046 SIGMAR1Q99720 223 aa5.76□□□□□ -1.49
NEDD8-205ENST00000527046 A0A1B0GVX0 72 aa5.75□□□□□ -1.49
NEDD8-205ENST00000527046 J3KT08 172 aa5.75□□□□□ -1.49
NEDD8-205ENST00000527046 RPL37P61927 97 aaKnown RBP5.75□□□□□ -1.49
NEDD8-205ENST00000527046 A8MUU9 505 aa5.74□□□□□ -1.49
NEDD8-205ENST00000527046 C20orf166-AS1Q96NR2 134 aa5.74□□□□□ -1.49
NEDD8-205ENST00000527046 IGHV6-1A0A0B4J1U7 121 aa5.73□□□□□ -1.49
NEDD8-205ENST00000527046 A8MWP4 228 aa5.73□□□□□ -1.49
NEDD8-205ENST00000527046 LINC00313P59037 77 aa5.73□□□□□ -1.49
NEDD8-205ENST00000527046 PCOTHQ58A44 107 aa5.73□□□□□ -1.49
NEDD8-205ENST00000527046 Q75L30 129 aa5.72□□□□□ -1.49
NEDD8-205ENST00000527046 H3BS24 57 aa5.71□□□□□ -1.5
NEDD8-205ENST00000527046 SEC61BP60468 96 aaKnown RBP5.71□□□□□ -1.5
NEDD8-205ENST00000527046 PRR15Q8IV56 129 aa5.71□□□□□ -1.5
NEDD8-205ENST00000527046 RNF213Q63HN8 5207 aa5.71□□□□□ -1.5
NEDD8-205ENST00000527046 C8orf87E5RJ46 101 aa5.69□□□□□ -1.5
NEDD8-205ENST00000527046 K7EQZ3 153 aa5.69□□□□□ -1.5
NEDD8-205ENST00000527046 C8orf17Q9NRJ1 99 aa5.69□□□□□ -1.5
NEDD8-205ENST00000527046 BPY2O14599 106 aa5.68□□□□□ -1.5
NEDD8-205ENST00000527046 MUC2Q02817 5179 aa5.68□□□□□ -1.5
NEDD8-205ENST00000527046 MMP24-AS1A0A0U1RRL7 71 aa5.67□□□□□ -1.5
NEDD8-205ENST00000527046 Q8N9L7 120 aa5.67□□□□□ -1.5
NEDD8-205ENST00000527046 NDUFB1O75438 58 aa5.66□□□□□ -1.5
NEDD8-205ENST00000527046 KRTAP19-2Q3LHN2 52 aa5.66□□□□□ -1.5
NEDD8-205ENST00000527046 Q8N9P0 234 aaPredicted RBP5.66□□□□□ -1.5
NEDD8-205ENST00000527046 UBL5Q9BZL1 73 aa5.66□□□□□ -1.5
NEDD8-205ENST00000527046 FAM240AA0A1B0GVK7 77 aa5.65□□□□□ -1.5
NEDD8-205ENST00000527046 ACYP1P07311 99 aa5.64□□□□□ -1.51
NEDD8-205ENST00000527046 ATP11AUNQ6ZP68 121 aa5.61□□□□□ -1.51
NEDD8-205ENST00000527046 CXCL6P80162 114 aa5.6□□□□□ -1.51
NEDD8-205ENST00000527046 TMEM254Q8TBM7 123 aa5.6□□□□□ -1.51
NEDD8-205ENST00000527046 hDV103S1A0JD37 113 aa5.59□□□□□ -1.51
NEDD8-205ENST00000527046 MRPL34Q9BQ48 92 aaKnown RBP5.59□□□□□ -1.51
NEDD8-205ENST00000527046 WFDC13Q8IUB5 93 aa5.56□□□□□ -1.52
NEDD8-205ENST00000527046 ZCCHC13Q8WW36 166 aaKnown RBP5.56□□□□□ -1.52
NEDD8-205ENST00000527046 Q5W150 140 aa5.55□□□□□ -1.52
NEDD8-205ENST00000527046 CASC2Q6XLA1 102 aa5.55□□□□□ -1.52
NEDD8-205ENST00000527046 LINC00643Q86TS7 51 aa5.54□□□□□ -1.52
NEDD8-205ENST00000527046 KRTAP9-2Q9BYQ4 174 aa5.54□□□□□ -1.52
NEDD8-205ENST00000527046 FAT4Q6V0I7 4981 aa5.54□□□□□ -1.52
NEDD8-205ENST00000527046 HCG22E2RYF7 251 aa5.53□□□□□ -1.52
NEDD8-205ENST00000527046 K7ERU9 68 aa5.52□□□□□ -1.53
NEDD8-205ENST00000527046 SCGB1A1P11684 91 aa5.51□□□□□ -1.53
NEDD8-205ENST00000527046 HRES1P13985 223 aa5.51□□□□□ -1.53
NEDD8-205ENST00000527046 ATP5EP2Q5VTU8 51 aa5.51□□□□□ -1.53
NEDD8-205ENST00000527046 MPLKIPQ8TAP9 179 aa5.51□□□□□ -1.53
NEDD8-205ENST00000527046 KRTAP9-6A0A140TA67 174 aa5.5□□□□□ -1.53
NEDD8-205ENST00000527046 J3QR89 54 aa5.49□□□□□ -1.53
NEDD8-205ENST00000527046 A0A087WVE0 104 aa5.48□□□□□ -1.53
NEDD8-205ENST00000527046 SPINK7P58062 85 aa5.48□□□□□ -1.53
NEDD8-205ENST00000527046 NDUFS5O43920 106 aa5.47□□□□□ -1.53
NEDD8-205ENST00000527046 LOC100996750A0A140TA64 210 aa5.46□□□□□ -1.54
NEDD8-205ENST00000527046 KRTAP4-6Q9BYQ5 205 aa5.46□□□□□ -1.54
NEDD8-205ENST00000527046 HIST1H4AP62805 103 aaKnown RBP5.45□□□□□ -1.54
NEDD8-205ENST00000527046 MT1HP80294 61 aa5.45□□□□□ -1.54
NEDD8-205ENST00000527046 A0A0U1RQV1 116 aa5.43□□□□□ -1.54
NEDD8-205ENST00000527046 MT-ATP8P03928 68 aa5.41□□□□□ -1.54
NEDD8-205ENST00000527046 TP53AIP1Q9HCN2 124 aa5.4□□□□□ -1.54
NEDD8-205ENST00000527046 IGKV2-30P06310 120 aa5.38□□□□□ -1.55
NEDD8-205ENST00000527046 OCR1Q9BZK8 76 aa5.37□□□□□ -1.55
NEDD8-205ENST00000527046 IGKV2D-30A0A075B6S6 120 aa5.36□□□□□ -1.55
NEDD8-205ENST00000527046 IMUPQ9GZP8 106 aa5.36□□□□□ -1.55
NEDD8-205ENST00000527046 COX6B2Q6YFQ2 88 aa5.35□□□□□ -1.55
NEDD8-205ENST00000527046 UQCRQO14949 82 aa5.34□□□□□ -1.55
NEDD8-205ENST00000527046 C7orf65Q6ZTY9 151 aa5.33□□□□□ -1.56
NEDD8-205ENST00000527046 KRTAP3-1Q9BYR8 98 aa5.33□□□□□ -1.56
NEDD8-205ENST00000527046 FLGP20930 4061 aaPredicted RBP5.32□□□□□ -1.56
NEDD8-205ENST00000527046 CYP4F30PQ9H0H9 118 aa5.32□□□□□ -1.56
NEDD8-205ENST00000527046 RBM12B-AS1Q9P1G2 102 aa5.32□□□□□ -1.56
NEDD8-205ENST00000527046 TRAV22A0A0B4J277 110 aa5.31□□□□□ -1.56
NEDD8-205ENST00000527046 KRTAP10-6P60371 365 aaPredicted RBP5.3□□□□□ -1.56
NEDD8-205ENST00000527046 C4orf26Q17RF5 130 aa5.29□□□□□ -1.56
NEDD8-205ENST00000527046 H0Y9P7 68 aa5.28□□□□□ -1.56
NEDD8-205ENST00000527046 FAM236DA0A1B0GTK5 79 aa5.27□□□□□ -1.57
NEDD8-205ENST00000527046 FAM236CP0DP71 79 aa5.27□□□□□ -1.57
NEDD8-205ENST00000527046 FAM236AA0A1B0GUQ0 79 aa5.24□□□□□ -1.57
NEDD8-205ENST00000527046 FAM236BA0A1B0GV22 79 aa5.24□□□□□ -1.57
NEDD8-205ENST00000527046 LOC101927531A0A1B0GV80 90 aa5.24□□□□□ -1.57
NEDD8-205ENST00000527046 KLKP1Q107X0 134 aa5.24□□□□□ -1.57
NEDD8-205ENST00000527046 H1FX-AS1Q4G0G2 97 aa5.24□□□□□ -1.57
NEDD8-205ENST00000527046 C5orf47Q569G3 176 aa5.24□□□□□ -1.57
NEDD8-205ENST00000527046 C1orf64Q8NEQ6 169 aa5.24□□□□□ -1.57
NEDD8-205ENST00000527046 KRTAP9-8Q9BYQ0 159 aa5.24□□□□□ -1.57
NEDD8-205ENST00000527046 LINC00208Q96KT6 92 aa5.23□□□□□ -1.57
NEDD8-205ENST00000527046 ATOX1O00244 68 aa5.22□□□□□ -1.57
NEDD8-205ENST00000527046 M0R2T5 61 aa5.21□□□□□ -1.58
NEDD8-205ENST00000527046 TRAV7A0A075B6U4 112 aa5.18□□□□□ -1.58
NEDD8-205ENST00000527046 H3BPC8 53 aa5.17□□□□□ -1.58
NEDD8-205ENST00000527046 MP68P56378 58 aa5.17□□□□□ -1.58
NEDD8-205ENST00000527046 MT2AP02795 61 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms