RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 JMJD7-PLA2G4BH0Y9G9 81 aa5.95□□□□□ -1.46
NEDD8-204ENST00000526430 CCKP06307 115 aa5.95□□□□□ -1.46
NEDD8-204ENST00000526430 USH2AO75445 5202 aa5.95□□□□□ -1.46
NEDD8-204ENST00000526430 DSCR8Q96T75 97 aa5.94□□□□□ -1.46
NEDD8-204ENST00000526430 C14orf132Q9NPU4 83 aa5.94□□□□□ -1.46
NEDD8-204ENST00000526430 XP32Q5T750 250 aa5.93□□□□□ -1.46
NEDD8-204ENST00000526430 FLGP20930 4061 aaPredicted RBP5.92□□□□□ -1.46
NEDD8-204ENST00000526430 LINC00472Q9H8W2 130 aa5.92□□□□□ -1.46
NEDD8-204ENST00000526430 M0R2T5 61 aa5.91□□□□□ -1.46
NEDD8-204ENST00000526430 MACF1Q9UPN3 7388 aaKnown RBP5.9□□□□□ -1.46
NEDD8-204ENST00000526430 A0A1B0GV90 55 aa5.9□□□□□ -1.46
NEDD8-204ENST00000526430 GTF2H5Q6ZYL4 71 aa5.9□□□□□ -1.46
NEDD8-204ENST00000526430 PDE6GP18545 87 aa5.89□□□□□ -1.47
NEDD8-204ENST00000526430 VPS25Q9BRG1 176 aa5.89□□□□□ -1.47
NEDD8-204ENST00000526430 F8W1H4 67 aa5.88□□□□□ -1.47
NEDD8-204ENST00000526430 SS18L2Q9UHA2 77 aa5.88□□□□□ -1.47
NEDD8-204ENST00000526430 C9orf92A6NGG3 77 aa5.86□□□□□ -1.47
NEDD8-204ENST00000526430 DEFB116Q30KQ4 102 aa5.86□□□□□ -1.47
NEDD8-204ENST00000526430 A0A1B0GW54 56 aa5.85□□□□□ -1.47
NEDD8-204ENST00000526430 ETDBQ3ZM63 59 aa5.84□□□□□ -1.47
NEDD8-204ENST00000526430 NOTCH2NLQ7Z3S9 236 aa5.84□□□□□ -1.47
NEDD8-204ENST00000526430 IGKV4-1P06312 121 aa5.82□□□□□ -1.48
NEDD8-204ENST00000526430 KRTAP16-1A8MUX0 517 aa5.8□□□□□ -1.48
NEDD8-204ENST00000526430 C21orf62-AS1Q17RA5 79 aa5.8□□□□□ -1.48
NEDD8-204ENST00000526430 PCOTHQ58A44 107 aa5.79□□□□□ -1.48
NEDD8-204ENST00000526430 KRTAP19-1Q8IUB9 90 aa5.78□□□□□ -1.48
NEDD8-204ENST00000526430 LINC00846Q9NV44 126 aa5.78□□□□□ -1.48
NEDD8-204ENST00000526430 DSCR10P59022 87 aa5.77□□□□□ -1.49
NEDD8-204ENST00000526430 IGKV3D-7A0A0C4DH55 119 aa5.76□□□□□ -1.49
NEDD8-204ENST00000526430 NREPQ16612 68 aa5.76□□□□□ -1.49
NEDD8-204ENST00000526430 COX6B2Q6YFQ2 88 aa5.76□□□□□ -1.49
NEDD8-204ENST00000526430 Q6ZVQ6 151 aa5.76□□□□□ -1.49
NEDD8-204ENST00000526430 SIGMAR1Q99720 223 aa5.76□□□□□ -1.49
NEDD8-204ENST00000526430 A0A1B0GVX0 72 aa5.75□□□□□ -1.49
NEDD8-204ENST00000526430 J3KT08 172 aa5.75□□□□□ -1.49
NEDD8-204ENST00000526430 RPL37P61927 97 aaKnown RBP5.75□□□□□ -1.49
NEDD8-204ENST00000526430 A8MUU9 505 aa5.74□□□□□ -1.49
NEDD8-204ENST00000526430 C20orf166-AS1Q96NR2 134 aa5.74□□□□□ -1.49
NEDD8-204ENST00000526430 IGHV6-1A0A0B4J1U7 121 aa5.73□□□□□ -1.49
NEDD8-204ENST00000526430 A8MWP4 228 aa5.73□□□□□ -1.49
NEDD8-204ENST00000526430 LINC00313P59037 77 aa5.73□□□□□ -1.49
NEDD8-204ENST00000526430 Q75L30 129 aa5.72□□□□□ -1.49
NEDD8-204ENST00000526430 H3BS24 57 aa5.71□□□□□ -1.5
NEDD8-204ENST00000526430 PRR15Q8IV56 129 aa5.71□□□□□ -1.5
NEDD8-204ENST00000526430 KRTAP9-8Q9BYQ0 159 aa5.7□□□□□ -1.5
NEDD8-204ENST00000526430 C8orf87E5RJ46 101 aa5.69□□□□□ -1.5
NEDD8-204ENST00000526430 K7EQZ3 153 aa5.69□□□□□ -1.5
NEDD8-204ENST00000526430 KRTAP6-3Q3LI67 103 aa5.69□□□□□ -1.5
NEDD8-204ENST00000526430 C8orf17Q9NRJ1 99 aa5.69□□□□□ -1.5
NEDD8-204ENST00000526430 BPY2O14599 106 aa5.68□□□□□ -1.5
NEDD8-204ENST00000526430 MMP24-AS1A0A0U1RRL7 71 aa5.67□□□□□ -1.5
NEDD8-204ENST00000526430 Q8N9L7 120 aa5.67□□□□□ -1.5
NEDD8-204ENST00000526430 NDUFB1O75438 58 aa5.66□□□□□ -1.5
NEDD8-204ENST00000526430 Q8N9P0 234 aaPredicted RBP5.66□□□□□ -1.5
NEDD8-204ENST00000526430 UBL5Q9BZL1 73 aa5.66□□□□□ -1.5
NEDD8-204ENST00000526430 NEBP20929 6669 aa5.65□□□□□ -1.5
NEDD8-204ENST00000526430 FAM240AA0A1B0GVK7 77 aa5.65□□□□□ -1.5
NEDD8-204ENST00000526430 ACYP1P07311 99 aa5.64□□□□□ -1.51
NEDD8-204ENST00000526430 ATP11AUNQ6ZP68 121 aa5.61□□□□□ -1.51
NEDD8-204ENST00000526430 CXCL6P80162 114 aa5.6□□□□□ -1.51
NEDD8-204ENST00000526430 TMEM254Q8TBM7 123 aa5.6□□□□□ -1.51
NEDD8-204ENST00000526430 hDV103S1A0JD37 113 aa5.59□□□□□ -1.51
NEDD8-204ENST00000526430 MRPL34Q9BQ48 92 aaKnown RBP5.59□□□□□ -1.51
NEDD8-204ENST00000526430 KRTAP19-6Q3LI70 58 aa5.57□□□□□ -1.52
NEDD8-204ENST00000526430 WFDC13Q8IUB5 93 aa5.56□□□□□ -1.52
NEDD8-204ENST00000526430 ZCCHC13Q8WW36 166 aaKnown RBP5.56□□□□□ -1.52
NEDD8-204ENST00000526430 Q5W150 140 aa5.55□□□□□ -1.52
NEDD8-204ENST00000526430 CASC2Q6XLA1 102 aa5.55□□□□□ -1.52
NEDD8-204ENST00000526430 MT2AP02795 61 aa5.54□□□□□ -1.52
NEDD8-204ENST00000526430 LINC00643Q86TS7 51 aa5.54□□□□□ -1.52
NEDD8-204ENST00000526430 HCG22E2RYF7 251 aa5.53□□□□□ -1.52
NEDD8-204ENST00000526430 KRTAP20-1Q3LI63 56 aa5.53□□□□□ -1.52
NEDD8-204ENST00000526430 KRTAP9-3Q9BYQ3 159 aa5.53□□□□□ -1.52
NEDD8-204ENST00000526430 HRES1P13985 223 aa5.51□□□□□ -1.53
NEDD8-204ENST00000526430 ATP5EP2Q5VTU8 51 aa5.51□□□□□ -1.53
NEDD8-204ENST00000526430 MPLKIPQ8TAP9 179 aa5.51□□□□□ -1.53
NEDD8-204ENST00000526430 J3QR89 54 aa5.49□□□□□ -1.53
NEDD8-204ENST00000526430 MT1FP04733 61 aa5.49□□□□□ -1.53
NEDD8-204ENST00000526430 A0A087WVE0 104 aa5.48□□□□□ -1.53
NEDD8-204ENST00000526430 SPINK7P58062 85 aa5.48□□□□□ -1.53
NEDD8-204ENST00000526430 NDUFS5O43920 106 aa5.47□□□□□ -1.53
NEDD8-204ENST00000526430 MUC12Q9UKN1 5478 aa5.45□□□□□ -1.54
NEDD8-204ENST00000526430 HIST1H4AP62805 103 aaKnown RBP5.45□□□□□ -1.54
NEDD8-204ENST00000526430 K7ERU9 68 aa5.44□□□□□ -1.54
NEDD8-204ENST00000526430 KRTAP10-10P60014 251 aa5.43□□□□□ -1.54
NEDD8-204ENST00000526430 MT-ATP8P03928 68 aa5.41□□□□□ -1.54
NEDD8-204ENST00000526430 TP53AIP1Q9HCN2 124 aa5.4□□□□□ -1.54
NEDD8-204ENST00000526430 IGKV2-30P06310 120 aa5.38□□□□□ -1.55
NEDD8-204ENST00000526430 OCR1Q9BZK8 76 aa5.37□□□□□ -1.55
NEDD8-204ENST00000526430 IGKV2D-30A0A075B6S6 120 aa5.36□□□□□ -1.55
NEDD8-204ENST00000526430 IMUPQ9GZP8 106 aa5.36□□□□□ -1.55
NEDD8-204ENST00000526430 UQCRQO14949 82 aa5.34□□□□□ -1.55
NEDD8-204ENST00000526430 C7orf65Q6ZTY9 151 aa5.33□□□□□ -1.56
NEDD8-204ENST00000526430 KRTAP3-1Q9BYR8 98 aa5.33□□□□□ -1.56
NEDD8-204ENST00000526430 CYP4F30PQ9H0H9 118 aa5.32□□□□□ -1.56
NEDD8-204ENST00000526430 RBM12B-AS1Q9P1G2 102 aa5.32□□□□□ -1.56
NEDD8-204ENST00000526430 TRAV22A0A0B4J277 110 aa5.31□□□□□ -1.56
NEDD8-204ENST00000526430 C4orf26Q17RF5 130 aa5.29□□□□□ -1.56
NEDD8-204ENST00000526430 LOC100996750A0A140TA64 210 aa5.28□□□□□ -1.56
NEDD8-204ENST00000526430 H0Y9P7 68 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms