RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 OTOGQ6ZRI0 2925 aa0.19□□□□□ -2.38
ECHDC1-219ENST00000526299 PRKDCP78527 4128 aaKnown RBP0.19□□□□□ -2.38
ECHDC1-219ENST00000526299 ZNF292O60281 2723 aa0.18□□□□□ -2.38
ECHDC1-219ENST00000526299 PIEZO1Q92508 2521 aa0.18□□□□□ -2.38
ECHDC1-219ENST00000526299 CSPG4Q6UVK1 2322 aa0.18□□□□□ -2.38
ECHDC1-219ENST00000526299 LRP1Q07954 4544 aaKnown RBP0.18□□□□□ -2.38
ECHDC1-219ENST00000526299 PTPN13Q12923 2485 aa0.18□□□□□ -2.38
ECHDC1-219ENST00000526299 SPRR2DP22532 72 aa0.18□□□□□ -2.38
ECHDC1-219ENST00000526299 LINC01556Q5JQF7 62 aa0.18□□□□□ -2.38
ECHDC1-219ENST00000526299 DEFB108BQ8NET1 73 aa0.18□□□□□ -2.38
ECHDC1-219ENST00000526299 HIVEP3Q5T1R4 2406 aa0.18□□□□□ -2.38
ECHDC1-219ENST00000526299 SACSQ9NZJ4 4579 aa0.18□□□□□ -2.38
ECHDC1-219ENST00000526299 POLQO75417 2590 aa0.18□□□□□ -2.38
ECHDC1-219ENST00000526299 PKHD1L1Q86WI1 4243 aa0.18□□□□□ -2.38
ECHDC1-219ENST00000526299 ANK3Q12955 4377 aaKnown RBP0.18□□□□□ -2.38
ECHDC1-219ENST00000526299 VPS13DQ5THJ4 4388 aa0.18□□□□□ -2.38
ECHDC1-219ENST00000526299 CSMD3Q7Z407 3707 aa0.17□□□□□ -2.38
ECHDC1-219ENST00000526299 DNAH2Q9P225 4427 aa0.17□□□□□ -2.38
ECHDC1-219ENST00000526299 LRP1BQ9NZR2 4599 aa0.17□□□□□ -2.38
ECHDC1-219ENST00000526299 VPS13BQ7Z7G8 4022 aa0.17□□□□□ -2.38
ECHDC1-219ENST00000526299 DEFB4AO15263 64 aa0.17□□□□□ -2.38
ECHDC1-219ENST00000526299 STATHP02808 62 aa0.17□□□□□ -2.38
ECHDC1-219ENST00000526299 SPRR2BP35325 72 aa0.17□□□□□ -2.38
ECHDC1-219ENST00000526299 DNAH3Q8TD57 4116 aa0.17□□□□□ -2.38
ECHDC1-219ENST00000526299 PCNX1Q96RV3 2341 aa0.17□□□□□ -2.38
ECHDC1-219ENST00000526299 DNAH6Q9C0G6 4158 aa0.17□□□□□ -2.38
ECHDC1-219ENST00000526299 LYSTQ99698 3801 aa0.17□□□□□ -2.38
ECHDC1-219ENST00000526299 ZFYVE26Q68DK2 2539 aa0.17□□□□□ -2.38
ECHDC1-219ENST00000526299 HSPG2P98160 4391 aa0.17□□□□□ -2.38
ECHDC1-219ENST00000526299 PKHD1P08F94 4074 aa0.17□□□□□ -2.38
ECHDC1-219ENST00000526299 APOBP04114 4563 aaKnown RBP0.16□□□□□ -2.38
ECHDC1-219ENST00000526299 TENM4Q6N022 2769 aa0.16□□□□□ -2.38
ECHDC1-219ENST00000526299 DNAH11Q96DT5 4516 aa0.16□□□□□ -2.38
ECHDC1-219ENST00000526299 KRTAP6-2Q3LI66 62 aa0.16□□□□□ -2.38
ECHDC1-219ENST00000526299 IGF2RP11717 2491 aa0.16□□□□□ -2.38
ECHDC1-219ENST00000526299 PKD1L2Q7Z442 2459 aa0.16□□□□□ -2.38
ECHDC1-219ENST00000526299 SPTBN4Q9H254 2564 aa0.16□□□□□ -2.38
ECHDC1-219ENST00000526299 CREBBPQ92793 2442 aa0.16□□□□□ -2.38
ECHDC1-219ENST00000526299 KMT2AQ03164 3969 aa0.16□□□□□ -2.38
ECHDC1-219ENST00000526299 DNAH10Q8IVF4 4471 aa0.16□□□□□ -2.38
ECHDC1-219ENST00000526299 CHD9Q3L8U1 2897 aa0.16□□□□□ -2.38
ECHDC1-219ENST00000526299 DYNC2H1Q8NCM8 4307 aaKnown RBP0.15□□□□□ -2.38
ECHDC1-219ENST00000526299 DNAH1Q9P2D7 4330 aa0.15□□□□□ -2.38
ECHDC1-219ENST00000526299 EP300Q09472 2414 aaPredicted RBP0.15□□□□□ -2.39
ECHDC1-219ENST00000526299 GVINP1Q7Z2Y8 2422 aa0.15□□□□□ -2.39
ECHDC1-219ENST00000526299 HECTD4Q9Y4D8 3996 aa0.15□□□□□ -2.39
ECHDC1-219ENST00000526299 HECTD1Q9ULT8 2610 aa0.15□□□□□ -2.39
ECHDC1-219ENST00000526299 PKD1P98161 4303 aa0.15□□□□□ -2.39
ECHDC1-219ENST00000526299 SPRR2AP35326 72 aa0.15□□□□□ -2.39
ECHDC1-219ENST00000526299 DNAH8Q96JB1 4490 aa0.15□□□□□ -2.39
ECHDC1-219ENST00000526299 NCOR1O75376 2440 aa0.15□□□□□ -2.39
ECHDC1-219ENST00000526299 FAT4Q6V0I7 4981 aa0.15□□□□□ -2.39
ECHDC1-219ENST00000526299 DNAH7Q8WXX0 4024 aa0.15□□□□□ -2.39
ECHDC1-219ENST00000526299 TNXBP22105 4242 aa0.14□□□□□ -2.39
ECHDC1-219ENST00000526299 CELSR2Q9HCU4 2923 aa0.14□□□□□ -2.39
ECHDC1-219ENST00000526299 SPTA1P02549 2419 aa0.14□□□□□ -2.39
ECHDC1-219ENST00000526299 MTORP42345 2549 aa0.14□□□□□ -2.39
ECHDC1-219ENST00000526299 DEFB124Q8NES8 71 aa0.14□□□□□ -2.39
ECHDC1-219ENST00000526299 AKAP13Q12802 2813 aa0.14□□□□□ -2.39
ECHDC1-219ENST00000526299 TRANK1O15050 2925 aa0.14□□□□□ -2.39
ECHDC1-219ENST00000526299 LRP2P98164 4655 aa0.14□□□□□ -2.39
ECHDC1-219ENST00000526299 NAV2Q8IVL1 2488 aa0.14□□□□□ -2.39
ECHDC1-219ENST00000526299 APC2O95996 2303 aa0.14□□□□□ -2.39
ECHDC1-219ENST00000526299 AKAP9Q99996 3911 aa0.14□□□□□ -2.39
ECHDC1-219ENST00000526299 UNC79Q9P2D8 2635 aa0.14□□□□□ -2.39
ECHDC1-219ENST00000526299 NBASA2RRP1 2371 aa0.13□□□□□ -2.39
ECHDC1-219ENST00000526299 FAT1Q14517 4588 aa0.13□□□□□ -2.39
ECHDC1-219ENST00000526299 CHD8Q9HCK8 2581 aa0.13□□□□□ -2.39
ECHDC1-219ENST00000526299 DYNC1H1Q14204 4646 aaKnown RBP0.13□□□□□ -2.39
ECHDC1-219ENST00000526299 ACANP16112 2415 aa0.13□□□□□ -2.39
ECHDC1-219ENST00000526299 NCOR2Q9Y618 2525 aa0.13□□□□□ -2.39
ECHDC1-219ENST00000526299 HERC1Q15751 4861 aa0.13□□□□□ -2.39
ECHDC1-219ENST00000526299 SMR3BP02814 79 aaPredicted RBP0.13□□□□□ -2.39
ECHDC1-219ENST00000526299 KRTAP19-8Q3LI54 63 aa0.13□□□□□ -2.39
ECHDC1-219ENST00000526299 Q9Y3F1 56 aa0.13□□□□□ -2.39
ECHDC1-219ENST00000526299 CEP290O15078 2479 aa0.13□□□□□ -2.39
ECHDC1-219ENST00000526299 FAT3Q8TDW7 4589 aa0.13□□□□□ -2.39
ECHDC1-219ENST00000526299 PLECQ15149 4684 aaKnown RBP0.13□□□□□ -2.39
ECHDC1-219ENST00000526299 IGSF10Q6WRI0 2623 aa0.13□□□□□ -2.39
ECHDC1-219ENST00000526299 MUC12Q9UKN1 5478 aa0.13□□□□□ -2.39
ECHDC1-219ENST00000526299 DSPP15924 2871 aaKnown RBP0.12□□□□□ -2.39
ECHDC1-219ENST00000526299 UBR5O95071 2799 aaPredicted RBP0.12□□□□□ -2.39
ECHDC1-219ENST00000526299 MAP1BP46821 2468 aaKnown RBP0.12□□□□□ -2.39
ECHDC1-219ENST00000526299 WNK1Q9H4A3 2382 aa0.12□□□□□ -2.39
ECHDC1-219ENST00000526299 FLGP20930 4061 aaPredicted RBP0.12□□□□□ -2.39
ECHDC1-219ENST00000526299 CMYA5Q8N3K9 4069 aa0.12□□□□□ -2.39
ECHDC1-219ENST00000526299 ATRQ13535 2644 aa0.12□□□□□ -2.39
ECHDC1-219ENST00000526299 SPRR2EP22531 72 aa0.12□□□□□ -2.39
ECHDC1-219ENST00000526299 RPS29P62273 56 aaKnown RBP0.12□□□□□ -2.39
ECHDC1-219ENST00000526299 KRTAP19-7Q3SYF9 63 aa0.12□□□□□ -2.39
ECHDC1-219ENST00000526299 KRTAP8-1Q8IUC2 63 aa0.12□□□□□ -2.39
ECHDC1-219ENST00000526299 SPRR2FQ96RM1 72 aa0.12□□□□□ -2.39
ECHDC1-219ENST00000526299 CUBNO60494 3623 aa0.12□□□□□ -2.39
ECHDC1-219ENST00000526299 CHD6Q8TD26 2715 aa0.12□□□□□ -2.39
ECHDC1-219ENST00000526299 GPR98Q8WXG9 6306 aa0.12□□□□□ -2.39
ECHDC1-219ENST00000526299 PCLOQ9Y6V0 5065 aa0.12□□□□□ -2.39
ECHDC1-219ENST00000526299 DNAH17Q9UFH2 4485 aa0.11□□□□□ -2.39
ECHDC1-219ENST00000526299 BPTFQ12830 3046 aa0.11□□□□□ -2.39
ECHDC1-219ENST00000526299 COL7A1Q02388 2944 aa0.11□□□□□ -2.39
ECHDC1-219ENST00000526299 MAST4O15021 2626 aa0.11□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms