RNA–Protein interactions for RNA: ENST00000525503.5

CCDC90B-203, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,919 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-203ENST00000525503 NDUFS5O43920 106 aa9.72□□□□□ -0.85
CCDC90B-203ENST00000525503 Q6ZSA8 131 aa9.72□□□□□ -0.85
CCDC90B-203ENST00000525503 DNAH11Q96DT5 4516 aa9.7□□□□□ -0.86
CCDC90B-203ENST00000525503 Q1T7F1 81 aa9.68□□□□□ -0.86
CCDC90B-203ENST00000525503 SPINK6Q6UWN8 80 aa9.68□□□□□ -0.86
CCDC90B-203ENST00000525503 KRTAP10-1P60331 282 aa9.68□□□□□ -0.86
CCDC90B-203ENST00000525503 DNAH5Q8TE73 4624 aa9.67□□□□□ -0.86
CCDC90B-203ENST00000525503 A0A087X002 238 aa9.66□□□□□ -0.86
CCDC90B-203ENST00000525503 NOTCH2NLQ7Z3S9 236 aa9.66□□□□□ -0.86
CCDC90B-203ENST00000525503 IGLV7-46A0A075B6I9 117 aa9.65□□□□□ -0.86
CCDC90B-203ENST00000525503 C8orf87E5RJ46 101 aa9.64□□□□□ -0.87
CCDC90B-203ENST00000525503 PKD1P98161 4303 aa9.62□□□□□ -0.87
CCDC90B-203ENST00000525503 PCOTHQ58A44 107 aa9.61□□□□□ -0.87
CCDC90B-203ENST00000525503 V9GYY9 64 aa9.61□□□□□ -0.87
CCDC90B-203ENST00000525503 KRTAP13-2Q52LG2 175 aa9.59□□□□□ -0.87
CCDC90B-203ENST00000525503 FAT2Q9NYQ8 4349 aa9.58□□□□□ -0.88
CCDC90B-203ENST00000525503 LOC101927531A0A1B0GV80 90 aa9.56□□□□□ -0.88
CCDC90B-203ENST00000525503 C1orf195Q5TG92 126 aa9.55□□□□□ -0.88
CCDC90B-203ENST00000525503 BRK1Q8WUW1 75 aa9.55□□□□□ -0.88
CCDC90B-203ENST00000525503 LINC00313P59037 77 aa9.54□□□□□ -0.88
CCDC90B-203ENST00000525503 COA5Q86WW8 74 aa9.54□□□□□ -0.88
CCDC90B-203ENST00000525503 LIMD2Q9BT23 127 aa9.53□□□□□ -0.88
CCDC90B-203ENST00000525503 KRTAP1-4P0C5Y4 121 aa9.52□□□□□ -0.88
CCDC90B-203ENST00000525503 KRTAP13-3Q3SY46 172 aa9.52□□□□□ -0.89
CCDC90B-203ENST00000525503 LRP1BQ9NZR2 4599 aa9.51□□□□□ -0.89
CCDC90B-203ENST00000525503 Q5W150 140 aa9.5□□□□□ -0.89
CCDC90B-203ENST00000525503 PSPHP1O15172 72 aa9.5□□□□□ -0.89
CCDC90B-203ENST00000525503 SEC61GP60059 68 aa9.48□□□□□ -0.89
CCDC90B-203ENST00000525503 Q8N9P0 234 aaPredicted RBP9.48□□□□□ -0.89
CCDC90B-203ENST00000525503 HYDINQ4G0P3 5121 aa9.47□□□□□ -0.89
CCDC90B-203ENST00000525503 FAM229AH3BQW9 127 aa9.46□□□□□ -0.9
CCDC90B-203ENST00000525503 PLA2G1BP04054 148 aaKnown RBP9.46□□□□□ -0.9
CCDC90B-203ENST00000525503 C4orf48Q5BLP8 95 aa9.46□□□□□ -0.9
CCDC90B-203ENST00000525503 A8MUN3 132 aa9.44□□□□□ -0.9
CCDC90B-203ENST00000525503 TYMSOSQ8TAI1 123 aa9.44□□□□□ -0.9
CCDC90B-203ENST00000525503 VPS13BQ7Z7G8 4022 aa9.42□□□□□ -0.9
CCDC90B-203ENST00000525503 SPINK1P00995 79 aa9.41□□□□□ -0.9
CCDC90B-203ENST00000525503 HRES1P13985 223 aa9.41□□□□□ -0.9
CCDC90B-203ENST00000525503 Q5VV11 94 aa9.39□□□□□ -0.91
CCDC90B-203ENST00000525503 KRTAP16-1A8MUX0 517 aa9.39□□□□□ -0.91
CCDC90B-203ENST00000525503 PRR15LQ9BU68 103 aa9.39□□□□□ -0.91
CCDC90B-203ENST00000525503 IGKV2-30P06310 120 aa9.34□□□□□ -0.91
CCDC90B-203ENST00000525503 ACYP2P14621 99 aa9.33□□□□□ -0.92
CCDC90B-203ENST00000525503 RPS29P62273 56 aaKnown RBP9.33□□□□□ -0.92
CCDC90B-203ENST00000525503 RETNLBQ9BQ08 111 aa9.33□□□□□ -0.92
CCDC90B-203ENST00000525503 CHKB-CPT1BH3BT56 60 aa9.32□□□□□ -0.92
CCDC90B-203ENST00000525503 LINC01558Q9Y6Z2 57 aa9.32□□□□□ -0.92
CCDC90B-203ENST00000525503 SPAG11AQ6PDA7 123 aa9.31□□□□□ -0.92
CCDC90B-203ENST00000525503 Q75L30 129 aa9.31□□□□□ -0.92
CCDC90B-203ENST00000525503 LINC00304Q8N9R0 145 aa9.31□□□□□ -0.92
CCDC90B-203ENST00000525503 SACSQ9NZJ4 4579 aa9.3□□□□□ -0.92
CCDC90B-203ENST00000525503 PMAIP1Q13794 54 aa9.29□□□□□ -0.92
CCDC90B-203ENST00000525503 DMAC1Q96GE9 116 aa9.29□□□□□ -0.92
CCDC90B-203ENST00000525503 PKHD1P08F94 4074 aa9.29□□□□□ -0.92
CCDC90B-203ENST00000525503 PRR26Q8N8Z3 221 aa9.29□□□□□ -0.92
CCDC90B-203ENST00000525503 A0A1B0GVY2 172 aa9.25□□□□□ -0.93
CCDC90B-203ENST00000525503 SMR3BP02814 79 aaPredicted RBP9.24□□□□□ -0.93
CCDC90B-203ENST00000525503 A6NED7 52 aa9.21□□□□□ -0.94
CCDC90B-203ENST00000525503 IGKV2D-30A0A075B6S6 120 aa9.2□□□□□ -0.94
CCDC90B-203ENST00000525503 DYNC1H1Q14204 4646 aaKnown RBP9.18□□□□□ -0.94
CCDC90B-203ENST00000525503 KRTAP10-4P60372 401 aaPredicted RBP9.15□□□□□ -0.94
CCDC90B-203ENST00000525503 A8MU10 97 aa9.11□□□□□ -0.95
CCDC90B-203ENST00000525503 C7orf65Q6ZTY9 151 aa9.11□□□□□ -0.95
CCDC90B-203ENST00000525503 LCA10Q71F78 164 aa9.11□□□□□ -0.95
CCDC90B-203ENST00000525503 CDC42SE1Q9NRR8 79 aa9.11□□□□□ -0.95
CCDC90B-203ENST00000525503 APOBP04114 4563 aaKnown RBP9.1□□□□□ -0.95
CCDC90B-203ENST00000525503 PKHD1L1Q86WI1 4243 aa9.09□□□□□ -0.95
CCDC90B-203ENST00000525503 ATP11AUNQ6ZP68 121 aa9.07□□□□□ -0.96
CCDC90B-203ENST00000525503 SPINK7P58062 85 aa9.05□□□□□ -0.96
CCDC90B-203ENST00000525503 A8MUU9 505 aa9.05□□□□□ -0.96
CCDC90B-203ENST00000525503 C20orf166-AS1Q96NR2 134 aa9.05□□□□□ -0.96
CCDC90B-203ENST00000525503 C9orf92A6NGG3 77 aa9.03□□□□□ -0.96
CCDC90B-203ENST00000525503 SPTSSBQ8NFR3 76 aa9.02□□□□□ -0.97
CCDC90B-203ENST00000525503 A0A1B0GU69 56 aa9.01□□□□□ -0.97
CCDC90B-203ENST00000525503 FAT1Q14517 4588 aa9.01□□□□□ -0.97
CCDC90B-203ENST00000525503 KTN1-AS1Q86SY8 53 aa9.01□□□□□ -0.97
CCDC90B-203ENST00000525503 RYR2Q92736 4967 aa9□□□□□ -0.97
CCDC90B-203ENST00000525503 Q8N1X5 172 aa8.95□□□□□ -0.98
CCDC90B-203ENST00000525503 KMT2CQ8NEZ4 4911 aaKnown RBP8.91□□□□□ -0.98
CCDC90B-203ENST00000525503 A6NN06 94 aa8.88□□□□□ -0.99
CCDC90B-203ENST00000525503 RBM12B-AS1Q9P1G2 102 aa8.88□□□□□ -0.99
CCDC90B-203ENST00000525503 UQCR11O14957 56 aa8.84□□□□□ -0.99
CCDC90B-203ENST00000525503 KRTAP10-8P60410 259 aa8.84□□□□□ -0.99
CCDC90B-203ENST00000525503 SPATA8Q6RVD6 105 aa8.84□□□□□ -1
CCDC90B-203ENST00000525503 Q5VSD8 79 aa8.83□□□□□ -1
CCDC90B-203ENST00000525503 MIR22HGQ0VDD5 57 aa8.8□□□□□ -1
CCDC90B-203ENST00000525503 KRTAP3-1Q9BYR8 98 aa8.78□□□□□ -1
CCDC90B-203ENST00000525503 FLG2Q5D862 2391 aaPredicted RBP8.78□□□□□ -1
CCDC90B-203ENST00000525503 TNXBP22105 4242 aa8.77□□□□□ -1.01
CCDC90B-203ENST00000525503 HSPG2P98160 4391 aa8.75□□□□□ -1.01
CCDC90B-203ENST00000525503 FAT3Q8TDW7 4589 aa8.72□□□□□ -1.01
CCDC90B-203ENST00000525503 COX6B2Q6YFQ2 88 aa8.72□□□□□ -1.01
CCDC90B-203ENST00000525503 RPL37P61927 97 aaKnown RBP8.67□□□□□ -1.02
CCDC90B-203ENST00000525503 RYR3Q15413 4870 aa8.67□□□□□ -1.02
CCDC90B-203ENST00000525503 LRP1Q07954 4544 aaKnown RBP8.66□□□□□ -1.02
CCDC90B-203ENST00000525503 XP32Q5T750 250 aa8.62□□□□□ -1.03
CCDC90B-203ENST00000525503 RYR1P21817 5038 aa8.59□□□□□ -1.03
CCDC90B-203ENST00000525503 A0A1B0GU33 70 aa8.56□□□□□ -1.04
CCDC90B-203ENST00000525503 KRTAP17-1Q9BYP8 105 aa8.56□□□□□ -1.04
CCDC90B-203ENST00000525503 MT1HL1P0DM35 61 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms