RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 KRTAP16-1A8MUX0 517 aa6.65□□□□□ -1.34
TRAPPC4-205ENST00000525079 TSTD3H0UI37 97 aa6.65□□□□□ -1.34
TRAPPC4-205ENST00000525079 M0R2T5 61 aa6.65□□□□□ -1.34
TRAPPC4-205ENST00000525079 PCP4P48539 62 aa6.62□□□□□ -1.35
TRAPPC4-205ENST00000525079 KRTAP10-6P60371 365 aaPredicted RBP6.61□□□□□ -1.35
TRAPPC4-205ENST00000525079 A0A1B0GVX0 72 aa6.6□□□□□ -1.35
TRAPPC4-205ENST00000525079 JMJD7-PLA2G4BH0Y9G9 81 aa6.6□□□□□ -1.35
TRAPPC4-205ENST00000525079 Q6ZQT0 140 aa6.6□□□□□ -1.35
TRAPPC4-205ENST00000525079 LYRM7Q5U5X0 104 aa6.58□□□□□ -1.36
TRAPPC4-205ENST00000525079 C14orf132Q9NPU4 83 aa6.58□□□□□ -1.36
TRAPPC4-205ENST00000525079 TRBV20-1A0A075B6N2 111 aa6.57□□□□□ -1.36
TRAPPC4-205ENST00000525079 LOC110117498A0A087WWA1 95 aa6.57□□□□□ -1.36
TRAPPC4-205ENST00000525079 C21orf62-AS1Q17RA5 79 aa6.57□□□□□ -1.36
TRAPPC4-205ENST00000525079 KRTAP9-6A0A140TA67 174 aa6.56□□□□□ -1.36
TRAPPC4-205ENST00000525079 C8orf87E5RJ46 101 aa6.56□□□□□ -1.36
TRAPPC4-205ENST00000525079 J3KT08 172 aa6.56□□□□□ -1.36
TRAPPC4-205ENST00000525079 FLGP20930 4061 aaPredicted RBP6.55□□□□□ -1.36
TRAPPC4-205ENST00000525079 C9orf118A6NHY6 69 aa6.55□□□□□ -1.36
TRAPPC4-205ENST00000525079 TAX1BP3O14907 124 aa6.55□□□□□ -1.36
TRAPPC4-205ENST00000525079 PDE6GP18545 87 aa6.53□□□□□ -1.36
TRAPPC4-205ENST00000525079 MTURNQ8N3F0 131 aa6.53□□□□□ -1.36
TRAPPC4-205ENST00000525079 A0A1W2PPM0 123 aa6.52□□□□□ -1.37
TRAPPC4-205ENST00000525079 NDUFB1O75438 58 aa6.52□□□□□ -1.37
TRAPPC4-205ENST00000525079 A0A1B0GW54 56 aa6.51□□□□□ -1.37
TRAPPC4-205ENST00000525079 A8MWP4 228 aa6.5□□□□□ -1.37
TRAPPC4-205ENST00000525079 IGKV3D-7A0A0C4DH55 119 aa6.49□□□□□ -1.37
TRAPPC4-205ENST00000525079 FAM236DA0A1B0GTK5 79 aa6.49□□□□□ -1.37
TRAPPC4-205ENST00000525079 FAM236CP0DP71 79 aa6.49□□□□□ -1.37
TRAPPC4-205ENST00000525079 HRES1P13985 223 aa6.49□□□□□ -1.37
TRAPPC4-205ENST00000525079 NREPQ16612 68 aa6.49□□□□□ -1.37
TRAPPC4-205ENST00000525079 C8orf17Q9NRJ1 99 aa6.49□□□□□ -1.37
TRAPPC4-205ENST00000525079 H3BT86 120 aa6.48□□□□□ -1.37
TRAPPC4-205ENST00000525079 ZCCHC13Q8WW36 166 aaKnown RBP6.48□□□□□ -1.37
TRAPPC4-205ENST00000525079 Q8N9P0 234 aaPredicted RBP6.45□□□□□ -1.38
TRAPPC4-205ENST00000525079 MPLKIPQ8TAP9 179 aa6.45□□□□□ -1.38
TRAPPC4-205ENST00000525079 RBM12B-AS1Q9P1G2 102 aa6.45□□□□□ -1.38
TRAPPC4-205ENST00000525079 FSIP2Q5CZC0 6907 aa6.44□□□□□ -1.38
TRAPPC4-205ENST00000525079 PRR15Q8IV56 129 aa6.44□□□□□ -1.38
TRAPPC4-205ENST00000525079 SPCS1Q9Y6A9 102 aa6.44□□□□□ -1.38
TRAPPC4-205ENST00000525079 Q6ZVQ6 151 aa6.43□□□□□ -1.38
TRAPPC4-205ENST00000525079 CRCT1Q9UGL9 99 aa6.43□□□□□ -1.38
TRAPPC4-205ENST00000525079 SPINK7P58062 85 aa6.42□□□□□ -1.38
TRAPPC4-205ENST00000525079 COL5A1-AS1Q5SY13 56 aa6.41□□□□□ -1.38
TRAPPC4-205ENST00000525079 MMP24-AS1A0A0U1RRL7 71 aa6.4□□□□□ -1.38
TRAPPC4-205ENST00000525079 K7EQZ3 153 aa6.4□□□□□ -1.38
TRAPPC4-205ENST00000525079 KRTAP9-8Q9BYQ0 159 aa6.39□□□□□ -1.39
TRAPPC4-205ENST00000525079 BPY2O14599 106 aa6.37□□□□□ -1.39
TRAPPC4-205ENST00000525079 TMEM254Q8TBM7 123 aa6.37□□□□□ -1.39
TRAPPC4-205ENST00000525079 MRPL34Q9BQ48 92 aaKnown RBP6.37□□□□□ -1.39
TRAPPC4-205ENST00000525079 hDV103S1A0JD37 113 aa6.35□□□□□ -1.39
TRAPPC4-205ENST00000525079 NDUFS5O43920 106 aa6.35□□□□□ -1.39
TRAPPC4-205ENST00000525079 Q8N9L7 120 aa6.34□□□□□ -1.39
TRAPPC4-205ENST00000525079 PRO0461Q9UI25 63 aa6.34□□□□□ -1.39
TRAPPC4-205ENST00000525079 H3BS24 57 aa6.33□□□□□ -1.4
TRAPPC4-205ENST00000525079 K7EP34 96 aa6.33□□□□□ -1.4
TRAPPC4-205ENST00000525079 WFDC13Q8IUB5 93 aa6.33□□□□□ -1.4
TRAPPC4-205ENST00000525079 MT2AP02795 61 aa6.31□□□□□ -1.4
TRAPPC4-205ENST00000525079 SCGB1A1P11684 91 aa6.29□□□□□ -1.4
TRAPPC4-205ENST00000525079 LINC00846Q9NV44 126 aa6.29□□□□□ -1.4
TRAPPC4-205ENST00000525079 K7ERU9 68 aa6.28□□□□□ -1.4
TRAPPC4-205ENST00000525079 CASC2Q6XLA1 102 aa6.28□□□□□ -1.4
TRAPPC4-205ENST00000525079 Q5W150 140 aa6.27□□□□□ -1.41
TRAPPC4-205ENST00000525079 MT1FP04733 61 aa6.26□□□□□ -1.41
TRAPPC4-205ENST00000525079 HCG22E2RYF7 251 aa6.25□□□□□ -1.41
TRAPPC4-205ENST00000525079 KRTAP10-10P60014 251 aa6.25□□□□□ -1.41
TRAPPC4-205ENST00000525079 UBL5Q9BZL1 73 aa6.25□□□□□ -1.41
TRAPPC4-205ENST00000525079 IGKV2D-30A0A075B6S6 120 aa6.24□□□□□ -1.41
TRAPPC4-205ENST00000525079 IGKV2-30P06310 120 aa6.24□□□□□ -1.41
TRAPPC4-205ENST00000525079 GTF2H5Q6ZYL4 71 aa6.24□□□□□ -1.41
TRAPPC4-205ENST00000525079 ETDBQ3ZM63 59 aa6.2□□□□□ -1.42
TRAPPC4-205ENST00000525079 F8W1H4 67 aa6.19□□□□□ -1.42
TRAPPC4-205ENST00000525079 C7orf65Q6ZTY9 151 aa6.19□□□□□ -1.42
TRAPPC4-205ENST00000525079 H1FX-AS1Q4G0G2 97 aa6.18□□□□□ -1.42
TRAPPC4-205ENST00000525079 KRTAP9-3Q9BYQ3 159 aa6.18□□□□□ -1.42
TRAPPC4-205ENST00000525079 USH2AO75445 5202 aa6.17□□□□□ -1.42
TRAPPC4-205ENST00000525079 CXCL6P80162 114 aa6.17□□□□□ -1.42
TRAPPC4-205ENST00000525079 C4orf26Q17RF5 130 aa6.14□□□□□ -1.43
TRAPPC4-205ENST00000525079 SSPOA2VEC9 5147 aa6.08□□□□□ -1.44
TRAPPC4-205ENST00000525079 J3QR89 54 aa6.06□□□□□ -1.44
TRAPPC4-205ENST00000525079 KRTAP19-1Q8IUB9 90 aa6.05□□□□□ -1.44
TRAPPC4-205ENST00000525079 TP53AIP1Q9HCN2 124 aa6.05□□□□□ -1.44
TRAPPC4-205ENST00000525079 KRTAP3-1Q9BYR8 98 aa6.04□□□□□ -1.44
TRAPPC4-205ENST00000525079 ACYP1P07311 99 aa6.02□□□□□ -1.45
TRAPPC4-205ENST00000525079 C1orf64Q8NEQ6 169 aa6.02□□□□□ -1.45
TRAPPC4-205ENST00000525079 C5orf47Q569G3 176 aa6□□□□□ -1.45
TRAPPC4-205ENST00000525079 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.99□□□□□ -1.45
TRAPPC4-205ENST00000525079 HIST1H4AP62805 103 aaKnown RBP5.98□□□□□ -1.45
TRAPPC4-205ENST00000525079 S4R3F8 94 aa5.98□□□□□ -1.45
TRAPPC4-205ENST00000525079 FAM240AA0A1B0GVK7 77 aa5.97□□□□□ -1.45
TRAPPC4-205ENST00000525079 LOC100996750A0A140TA64 210 aa5.96□□□□□ -1.46
TRAPPC4-205ENST00000525079 KRTAP4-6Q9BYQ5 205 aa5.96□□□□□ -1.46
TRAPPC4-205ENST00000525079 CYP4F30PQ9H0H9 118 aa5.96□□□□□ -1.46
TRAPPC4-205ENST00000525079 FCGBPQ9Y6R7 5405 aaPredicted RBP5.96□□□□□ -1.46
TRAPPC4-205ENST00000525079 ATP5EP2Q5VTU8 51 aa5.94□□□□□ -1.46
TRAPPC4-205ENST00000525079 LCA10Q71F78 164 aa5.94□□□□□ -1.46
TRAPPC4-205ENST00000525079 TRAV22A0A0B4J277 110 aa5.93□□□□□ -1.46
TRAPPC4-205ENST00000525079 CSAG1Q6PB30 78 aa5.92□□□□□ -1.46
TRAPPC4-205ENST00000525079 A0A087WVE0 104 aa5.91□□□□□ -1.46
TRAPPC4-205ENST00000525079 FAM236AA0A1B0GUQ0 79 aa5.91□□□□□ -1.46
TRAPPC4-205ENST00000525079 FAM236BA0A1B0GV22 79 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms