RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 IGKV3D-7A0A0C4DH55 119 aa4.25□□□□□ -1.73
VPS11-201ENST00000524454 KRTAP29-1A8MX34 341 aaPredicted RBP4.25□□□□□ -1.73
VPS11-201ENST00000524454 BPY2O14599 106 aa4.25□□□□□ -1.73
VPS11-201ENST00000524454 FAM229BQ4G0N7 80 aa4.25□□□□□ -1.73
VPS11-201ENST00000524454 SS18L2Q9UHA2 77 aa4.25□□□□□ -1.73
VPS11-201ENST00000524454 CD164Q04900 197 aa4.24□□□□□ -1.73
VPS11-201ENST00000524454 J3KT08 172 aa4.23□□□□□ -1.73
VPS11-201ENST00000524454 UQCRQO14949 82 aa4.22□□□□□ -1.73
VPS11-201ENST00000524454 SSBP3-AS1Q7Z2R9 100 aa4.22□□□□□ -1.73
VPS11-201ENST00000524454 SERP2Q8N6R1 65 aa4.22□□□□□ -1.73
VPS11-201ENST00000524454 DMBT1Q9UGM3 2413 aaPredicted RBP4.22□□□□□ -1.73
VPS11-201ENST00000524454 OXTP01178 125 aa4.21□□□□□ -1.74
VPS11-201ENST00000524454 IGKV4-1P06312 121 aa4.21□□□□□ -1.74
VPS11-201ENST00000524454 MT1HL1P0DM35 61 aa4.21□□□□□ -1.74
VPS11-201ENST00000524454 A0A087WSZ3 146 aa4.2□□□□□ -1.74
VPS11-201ENST00000524454 A0A087WVE0 104 aa4.2□□□□□ -1.74
VPS11-201ENST00000524454 COX7CP15954 63 aa4.2□□□□□ -1.74
VPS11-201ENST00000524454 TRAV7A0A075B6U4 112 aa4.19□□□□□ -1.74
VPS11-201ENST00000524454 KRTAP15-1Q3LI76 137 aa4.19□□□□□ -1.74
VPS11-201ENST00000524454 ASB16-AS1Q495Z4 193 aa4.19□□□□□ -1.74
VPS11-201ENST00000524454 C9orf153Q5TBE3 101 aa4.19□□□□□ -1.74
VPS11-201ENST00000524454 Q5XG85 94 aa4.19□□□□□ -1.74
VPS11-201ENST00000524454 LINC00472Q9H8W2 130 aa4.19□□□□□ -1.74
VPS11-201ENST00000524454 DSCR10P59022 87 aa4.18□□□□□ -1.74
VPS11-201ENST00000524454 IGLV9-49A0A0B4J1Y8 123 aa4.17□□□□□ -1.74
VPS11-201ENST00000524454 A8MWP4 228 aa4.17□□□□□ -1.74
VPS11-201ENST00000524454 MOBPQ13875 183 aa4.17□□□□□ -1.74
VPS11-201ENST00000524454 SPINK6Q6UWN8 80 aa4.17□□□□□ -1.74
VPS11-201ENST00000524454 TNXBP22105 4242 aa4.16□□□□□ -1.74
VPS11-201ENST00000524454 K7EQZ3 153 aa4.15□□□□□ -1.75
VPS11-201ENST00000524454 NDUFB1O75438 58 aa4.15□□□□□ -1.75
VPS11-201ENST00000524454 RPS29P62273 56 aaKnown RBP4.15□□□□□ -1.75
VPS11-201ENST00000524454 PRR15Q8IV56 129 aa4.15□□□□□ -1.75
VPS11-201ENST00000524454 HCG22E2RYF7 251 aa4.14□□□□□ -1.75
VPS11-201ENST00000524454 KRTAP1-4P0C5Y4 121 aa4.14□□□□□ -1.75
VPS11-201ENST00000524454 OCR1Q9BZK8 76 aa4.14□□□□□ -1.75
VPS11-201ENST00000524454 CCDC179H3BU77 68 aa4.13□□□□□ -1.75
VPS11-201ENST00000524454 KLKP1Q107X0 134 aa4.13□□□□□ -1.75
VPS11-201ENST00000524454 Q96NJ1 140 aa4.13□□□□□ -1.75
VPS11-201ENST00000524454 LIMD2Q9BT23 127 aa4.13□□□□□ -1.75
VPS11-201ENST00000524454 HMCN2Q8NDA2 5059 aa4.13□□□□□ -1.75
VPS11-201ENST00000524454 NDUFC1O43677 76 aa4.12□□□□□ -1.75
VPS11-201ENST00000524454 KRTAP10-8P60410 259 aa4.12□□□□□ -1.75
VPS11-201ENST00000524454 PRR26Q8N8Z3 221 aa4.12□□□□□ -1.75
VPS11-201ENST00000524454 Q8N9L7 120 aa4.12□□□□□ -1.75
VPS11-201ENST00000524454 A0A0G2JQZ4 141 aa4.11□□□□□ -1.75
VPS11-201ENST00000524454 SPAG11AQ6PDA7 123 aa4.11□□□□□ -1.75
VPS11-201ENST00000524454 A0A087X002 238 aa4.1□□□□□ -1.75
VPS11-201ENST00000524454 A0A1B0GVX0 72 aa4.1□□□□□ -1.75
VPS11-201ENST00000524454 SPINK1P00995 79 aa4.1□□□□□ -1.75
VPS11-201ENST00000524454 TMEM258P61165 79 aa4.1□□□□□ -1.75
VPS11-201ENST00000524454 KRTAP13-2Q52LG2 175 aa4.1□□□□□ -1.75
VPS11-201ENST00000524454 C8orf87E5RJ46 101 aa4.09□□□□□ -1.75
VPS11-201ENST00000524454 H3BPC8 53 aa4.09□□□□□ -1.75
VPS11-201ENST00000524454 C5orf47Q569G3 176 aa4.09□□□□□ -1.75
VPS11-201ENST00000524454 CASC2Q6XLA1 102 aa4.09□□□□□ -1.75
VPS11-201ENST00000524454 TP53AIP1Q9HCN2 124 aa4.09□□□□□ -1.75
VPS11-201ENST00000524454 ANAPC11Q9NYG5 84 aa4.09□□□□□ -1.75
VPS11-201ENST00000524454 MMP24-AS1A0A0U1RRL7 71 aa4.08□□□□□ -1.76
VPS11-201ENST00000524454 ATP5EP56381 51 aaPredicted RBP4.07□□□□□ -1.76
VPS11-201ENST00000524454 C20orf197Q8N268 126 aa4.07□□□□□ -1.76
VPS11-201ENST00000524454 TYMSOSQ8TAI1 123 aa4.07□□□□□ -1.76
VPS11-201ENST00000524454 TMEM254Q8TBM7 123 aa4.07□□□□□ -1.76
VPS11-201ENST00000524454 hDV103S1A0JD37 113 aa4.06□□□□□ -1.76
VPS11-201ENST00000524454 DEFB116Q30KQ4 102 aa4.06□□□□□ -1.76
VPS11-201ENST00000524454 C8orf17Q9NRJ1 99 aa4.06□□□□□ -1.76
VPS11-201ENST00000524454 A0A0U1RQV1 116 aa4.05□□□□□ -1.76
VPS11-201ENST00000524454 HRCT1Q6UXD1 115 aa4.05□□□□□ -1.76
VPS11-201ENST00000524454 MP68P56378 58 aa4.04□□□□□ -1.76
VPS11-201ENST00000524454 LINC00304Q8N9R0 145 aa4.04□□□□□ -1.76
VPS11-201ENST00000524454 H7BZZ5 65 aa4.03□□□□□ -1.76
VPS11-201ENST00000524454 C1orf195Q5TG92 126 aa4.03□□□□□ -1.76
VPS11-201ENST00000524454 WFDC13Q8IUB5 93 aa4.03□□□□□ -1.76
VPS11-201ENST00000524454 ZCCHC13Q8WW36 166 aaKnown RBP4.03□□□□□ -1.76
VPS11-201ENST00000524454 MRPL34Q9BQ48 92 aaKnown RBP4.03□□□□□ -1.76
VPS11-201ENST00000524454 UBR4Q5T4S7 5183 aa4.03□□□□□ -1.76
VPS11-201ENST00000524454 IGHV6-1A0A0B4J1U7 121 aa4.02□□□□□ -1.77
VPS11-201ENST00000524454 TRAV22A0A0B4J277 110 aa4.02□□□□□ -1.77
VPS11-201ENST00000524454 RPS28P62857 69 aaKnown RBP4.02□□□□□ -1.77
VPS11-201ENST00000524454 LPAP08519 4548 aa4.01□□□□□ -1.77
VPS11-201ENST00000524454 LRP2P98164 4655 aa4□□□□□ -1.77
VPS11-201ENST00000524454 FAM236DA0A1B0GTK5 79 aa3.99□□□□□ -1.77
VPS11-201ENST00000524454 FAM236CP0DP71 79 aa3.99□□□□□ -1.77
VPS11-201ENST00000524454 LINC00313P59037 77 aa3.99□□□□□ -1.77
VPS11-201ENST00000524454 PRR4Q16378 134 aa3.99□□□□□ -1.77
VPS11-201ENST00000524454 Q8N9P0 234 aaPredicted RBP3.99□□□□□ -1.77
VPS11-201ENST00000524454 CYSTM1Q9H1C7 97 aa3.99□□□□□ -1.77
VPS11-201ENST00000524454 H0Y9P7 68 aa3.98□□□□□ -1.77
VPS11-201ENST00000524454 SPANXA2-OT1Q8N9U9 137 aa3.98□□□□□ -1.77
VPS11-201ENST00000524454 RETNLBQ9BQ08 111 aa3.98□□□□□ -1.77
VPS11-201ENST00000524454 SNURFQ9Y675 71 aa3.98□□□□□ -1.77
VPS11-201ENST00000524454 LOC101927531A0A1B0GV80 90 aa3.96□□□□□ -1.78
VPS11-201ENST00000524454 KRTAP16-1A8MUX0 517 aa3.95□□□□□ -1.78
VPS11-201ENST00000524454 KRTAP13-3Q3SY46 172 aa3.95□□□□□ -1.78
VPS11-201ENST00000524454 C1orf64Q8NEQ6 169 aa3.95□□□□□ -1.78
VPS11-201ENST00000524454 CYP4F30PQ9H0H9 118 aa3.95□□□□□ -1.78
VPS11-201ENST00000524454 SERP1Q9Y6X1 66 aa3.95□□□□□ -1.78
VPS11-201ENST00000524454 FP248Q71RG6 208 aaPredicted RBP3.94□□□□□ -1.78
VPS11-201ENST00000524454 LINC00208Q96KT6 92 aa3.94□□□□□ -1.78
VPS11-201ENST00000524454 NDUFS5O43920 106 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms