RNA–Protein interactions for RNA: ENST00000524238.3

HMBOX1-211, Transcript of homeobox containing 1, humanhuman

TSL 2 BASIC

Gene HMBOX1, Length 1,731 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-211ENST00000524238 TEP1Q99973 2627 aaKnown RBP4.4□□□□□ -1.71
HMBOX1-211ENST00000524238 KRTAP24-1Q3LI83 254 aa4.39□□□□□ -1.71
HMBOX1-211ENST00000524238 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.39□□□□□ -1.71
HMBOX1-211ENST00000524238 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.38□□□□□ -1.71
HMBOX1-211ENST00000524238 Q6ZRN7 208 aaPredicted RBP4.38□□□□□ -1.71
HMBOX1-211ENST00000524238 ADM2Q7Z4H4 148 aa4.38□□□□□ -1.71
HMBOX1-211ENST00000524238 CIRBP-AS1Q8TBR5 109 aa4.38□□□□□ -1.71
HMBOX1-211ENST00000524238 KRTAP9-2Q9BYQ4 174 aa4.38□□□□□ -1.71
HMBOX1-211ENST00000524238 NUPR2A6NF83 97 aa4.37□□□□□ -1.71
HMBOX1-211ENST00000524238 ALMS1Q8TCU4 4167 aa4.36□□□□□ -1.71
HMBOX1-211ENST00000524238 IGLV7-43P04211 117 aa4.36□□□□□ -1.71
HMBOX1-211ENST00000524238 KRTAP9-6A0A140TA67 174 aa4.35□□□□□ -1.71
HMBOX1-211ENST00000524238 ATRQ13535 2644 aa4.35□□□□□ -1.71
HMBOX1-211ENST00000524238 PKD1L1Q8TDX9 2849 aa4.35□□□□□ -1.71
HMBOX1-211ENST00000524238 A0A087WTM6 91 aa4.35□□□□□ -1.71
HMBOX1-211ENST00000524238 TENM3Q9P273 2699 aa4.34□□□□□ -1.71
HMBOX1-211ENST00000524238 IGKV2D-30A0A075B6S6 120 aa4.34□□□□□ -1.71
HMBOX1-211ENST00000524238 CSAG1Q6PB30 78 aa4.34□□□□□ -1.71
HMBOX1-211ENST00000524238 NSD1Q96L73 2696 aaPredicted RBP4.34□□□□□ -1.72
HMBOX1-211ENST00000524238 TENM1Q9UKZ4 2725 aa4.33□□□□□ -1.72
HMBOX1-211ENST00000524238 ANAPC11Q9NYG5 84 aa4.33□□□□□ -1.72
HMBOX1-211ENST00000524238 H3BS24 57 aa4.32□□□□□ -1.72
HMBOX1-211ENST00000524238 TRRAPQ9Y4A5 3859 aa4.32□□□□□ -1.72
HMBOX1-211ENST00000524238 ANK2Q01484 3957 aa4.32□□□□□ -1.72
HMBOX1-211ENST00000524238 LY6G6CO95867 125 aa4.32□□□□□ -1.72
HMBOX1-211ENST00000524238 ITPR2Q14571 2701 aa4.32□□□□□ -1.72
HMBOX1-211ENST00000524238 FASNP49327 2511 aaKnown RBP4.31□□□□□ -1.72
HMBOX1-211ENST00000524238 KRTAP16-1A8MUX0 517 aa4.29□□□□□ -1.72
HMBOX1-211ENST00000524238 DNAH3Q8TD57 4116 aa4.29□□□□□ -1.72
HMBOX1-211ENST00000524238 BAHCC1Q9P281 2608 aa4.29□□□□□ -1.72
HMBOX1-211ENST00000524238 TENM4Q6N022 2769 aa4.28□□□□□ -1.72
HMBOX1-211ENST00000524238 MAST4O15021 2626 aa4.28□□□□□ -1.72
HMBOX1-211ENST00000524238 LCE2CQ5TA81 110 aa4.27□□□□□ -1.73
HMBOX1-211ENST00000524238 OTOGQ6ZRI0 2925 aa4.26□□□□□ -1.73
HMBOX1-211ENST00000524238 A8MUU9 505 aa4.25□□□□□ -1.73
HMBOX1-211ENST00000524238 LORP23490 312 aaPredicted RBP4.25□□□□□ -1.73
HMBOX1-211ENST00000524238 KRTAP25-1Q3LHN0 102 aa4.25□□□□□ -1.73
HMBOX1-211ENST00000524238 LCE3BQ5TA77 95 aa4.25□□□□□ -1.73
HMBOX1-211ENST00000524238 HUWE1Q7Z6Z7 4374 aaKnown RBP4.25□□□□□ -1.73
HMBOX1-211ENST00000524238 FLNBO75369 2602 aaKnown RBP4.25□□□□□ -1.73
HMBOX1-211ENST00000524238 K7ERS5 55 aa4.24□□□□□ -1.73
HMBOX1-211ENST00000524238 SRRM2Q9UQ35 2752 aaKnown RBP4.24□□□□□ -1.73
HMBOX1-211ENST00000524238 HECTD1Q9ULT8 2610 aa4.24□□□□□ -1.73
HMBOX1-211ENST00000524238 DNAH10Q8IVF4 4471 aa4.23□□□□□ -1.73
HMBOX1-211ENST00000524238 C1orf134Q5TEV5 83 aa4.23□□□□□ -1.73
HMBOX1-211ENST00000524238 CMYA5Q8N3K9 4069 aa4.22□□□□□ -1.73
HMBOX1-211ENST00000524238 DNAH9Q9NYC9 4486 aa4.22□□□□□ -1.73
HMBOX1-211ENST00000524238 SPINK1P00995 79 aa4.21□□□□□ -1.73
HMBOX1-211ENST00000524238 KRTAP4-8A0A0G2JLE6 195 aa4.21□□□□□ -1.74
HMBOX1-211ENST00000524238 A0A1B0GU33 70 aa4.21□□□□□ -1.74
HMBOX1-211ENST00000524238 KRTAP13-2Q52LG2 175 aa4.21□□□□□ -1.74
HMBOX1-211ENST00000524238 HELZ2Q9BYK8 2649 aaKnown RBP4.2□□□□□ -1.74
HMBOX1-211ENST00000524238 LYSTQ99698 3801 aa4.2□□□□□ -1.74
HMBOX1-211ENST00000524238 ROMO1P60602 79 aa4.2□□□□□ -1.74
HMBOX1-211ENST00000524238 Q6ZSA8 131 aa4.2□□□□□ -1.74
HMBOX1-211ENST00000524238 LINC00304Q8N9R0 145 aa4.2□□□□□ -1.74
HMBOX1-211ENST00000524238 H0YAA0 97 aa4.19□□□□□ -1.74
HMBOX1-211ENST00000524238 RPS29P62273 56 aaKnown RBP4.18□□□□□ -1.74
HMBOX1-211ENST00000524238 DYNC2H1Q8NCM8 4307 aaKnown RBP4.18□□□□□ -1.74
HMBOX1-211ENST00000524238 H1FX-AS1Q4G0G2 97 aa4.18□□□□□ -1.74
HMBOX1-211ENST00000524238 Q8N1X5 172 aa4.17□□□□□ -1.74
HMBOX1-211ENST00000524238 TYMSOSQ8TAI1 123 aa4.15□□□□□ -1.75
HMBOX1-211ENST00000524238 KRTAP9-9Q9BYP9 154 aa4.15□□□□□ -1.75
HMBOX1-211ENST00000524238 KRTAP9-4Q9BYQ2 154 aa4.15□□□□□ -1.75
HMBOX1-211ENST00000524238 FBN1P35555 2871 aaKnown RBP4.13□□□□□ -1.75
HMBOX1-211ENST00000524238 DNAH8Q96JB1 4490 aa4.13□□□□□ -1.75
HMBOX1-211ENST00000524238 NBEAL1Q6ZS30 2694 aa4.13□□□□□ -1.75
HMBOX1-211ENST00000524238 KRTAP1-4P0C5Y4 121 aa4.12□□□□□ -1.75
HMBOX1-211ENST00000524238 CSMD3Q7Z407 3707 aa4.11□□□□□ -1.75
HMBOX1-211ENST00000524238 KRTAP4-7Q9BYR0 210 aa4.1□□□□□ -1.75
HMBOX1-211ENST00000524238 STAB1Q9NY15 2570 aa4.1□□□□□ -1.75
HMBOX1-211ENST00000524238 NOTCH1P46531 2555 aa4.1□□□□□ -1.75
HMBOX1-211ENST00000524238 C20orf166-AS1Q96NR2 134 aa4.09□□□□□ -1.75
HMBOX1-211ENST00000524238 COL6A5A8TX70 2615 aa4.07□□□□□ -1.76
HMBOX1-211ENST00000524238 FRAS1Q86XX4 4008 aa4.07□□□□□ -1.76
HMBOX1-211ENST00000524238 KRTAP4-12Q9BQ66 201 aa4.07□□□□□ -1.76
HMBOX1-211ENST00000524238 HECTD4Q9Y4D8 3996 aa4.06□□□□□ -1.76
HMBOX1-211ENST00000524238 DNAH17Q9UFH2 4485 aa4.06□□□□□ -1.76
HMBOX1-211ENST00000524238 STAB2Q8WWQ8 2551 aa4.06□□□□□ -1.76
HMBOX1-211ENST00000524238 COX6B2Q6YFQ2 88 aa4.06□□□□□ -1.76
HMBOX1-211ENST00000524238 DNAH7Q8WXX0 4024 aa4.06□□□□□ -1.76
HMBOX1-211ENST00000524238 RPL37P61927 97 aaKnown RBP4.05□□□□□ -1.76
HMBOX1-211ENST00000524238 PLECQ15149 4684 aaKnown RBP4.04□□□□□ -1.76
HMBOX1-211ENST00000524238 KRTAP10-2P60368 255 aa4.04□□□□□ -1.76
HMBOX1-211ENST00000524238 VPS13DQ5THJ4 4388 aa4.04□□□□□ -1.76
HMBOX1-211ENST00000524238 COL7A1Q02388 2944 aa4.04□□□□□ -1.76
HMBOX1-211ENST00000524238 KRTAP3-1Q9BYR8 98 aa4.04□□□□□ -1.76
HMBOX1-211ENST00000524238 KRTAP10-1P60331 282 aa4.02□□□□□ -1.77
HMBOX1-211ENST00000524238 SPINT4Q6UDR6 99 aa4.01□□□□□ -1.77
HMBOX1-211ENST00000524238 P0C880 135 aa3.99□□□□□ -1.77
HMBOX1-211ENST00000524238 TGP01266 2768 aa3.99□□□□□ -1.77
HMBOX1-211ENST00000524238 PRKDCP78527 4128 aaKnown RBP3.99□□□□□ -1.77
HMBOX1-211ENST00000524238 J3QL48 77 aa3.98□□□□□ -1.77
HMBOX1-211ENST00000524238 C9orf92A6NGG3 77 aa3.98□□□□□ -1.77
HMBOX1-211ENST00000524238 LCE1DQ5T752 114 aa3.97□□□□□ -1.77
HMBOX1-211ENST00000524238 KRTAP17-1Q9BYP8 105 aa3.96□□□□□ -1.78
HMBOX1-211ENST00000524238 CRIPTQ9P021 101 aa3.96□□□□□ -1.78
HMBOX1-211ENST00000524238 MEGF8Q7Z7M0 2845 aa3.95□□□□□ -1.78
HMBOX1-211ENST00000524238 DNAH2Q9P225 4427 aa3.95□□□□□ -1.78
HMBOX1-211ENST00000524238 MGAM2Q2M2H8 2515 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms