RNA–Protein interactions for RNA: ENST00000523647.1

SMARCE1P4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 4, humanhuman

BASIC

Gene SMARCE1P4, Length 241 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P4-201ENST00000523647 CREBBPQ92793 2442 aa0.86□□□□□ -2.27
SMARCE1P4-201ENST00000523647 SYNE1Q8NF91 8797 aaKnown RBP0.85□□□□□ -2.27
SMARCE1P4-201ENST00000523647 SETXQ7Z333 2677 aaKnown RBP0.85□□□□□ -2.27
SMARCE1P4-201ENST00000523647 MUC16Q8WXI7 14507 aa0.84□□□□□ -2.27
SMARCE1P4-201ENST00000523647 NF1P21359 2839 aa0.84□□□□□ -2.27
SMARCE1P4-201ENST00000523647 MAP1BP46821 2468 aaKnown RBP0.84□□□□□ -2.28
SMARCE1P4-201ENST00000523647 ZFYVE26Q68DK2 2539 aa0.84□□□□□ -2.28
SMARCE1P4-201ENST00000523647 DNAH11Q96DT5 4516 aa0.84□□□□□ -2.28
SMARCE1P4-201ENST00000523647 PTPN13Q12923 2485 aa0.83□□□□□ -2.28
SMARCE1P4-201ENST00000523647 CHD7Q9P2D1 2997 aa0.82□□□□□ -2.28
SMARCE1P4-201ENST00000523647 MYCBP2O75592 4640 aa0.82□□□□□ -2.28
SMARCE1P4-201ENST00000523647 TNP1P09430 55 aa0.81□□□□□ -2.28
SMARCE1P4-201ENST00000523647 TOMM7Q9P0U1 55 aa0.81□□□□□ -2.28
SMARCE1P4-201ENST00000523647 FLNCQ14315 2725 aa0.81□□□□□ -2.28
SMARCE1P4-201ENST00000523647 SPRR2DP22532 72 aa0.8□□□□□ -2.28
SMARCE1P4-201ENST00000523647 NBASA2RRP1 2371 aa0.8□□□□□ -2.28
SMARCE1P4-201ENST00000523647 HIVEP3Q5T1R4 2406 aa0.8□□□□□ -2.28
SMARCE1P4-201ENST00000523647 H3BNG1 76 aa0.79□□□□□ -2.28
SMARCE1P4-201ENST00000523647 LINC01590Q5TEZ4 76 aa0.79□□□□□ -2.28
SMARCE1P4-201ENST00000523647 ACANP16112 2415 aa0.79□□□□□ -2.28
SMARCE1P4-201ENST00000523647 NAV2Q8IVL1 2488 aa0.79□□□□□ -2.28
SMARCE1P4-201ENST00000523647 SETD2Q9BYW2 2564 aaPredicted RBP0.79□□□□□ -2.28
SMARCE1P4-201ENST00000523647 LRP1Q07954 4544 aaKnown RBP0.79□□□□□ -2.28
SMARCE1P4-201ENST00000523647 PKD1P98161 4303 aa0.78□□□□□ -2.28
SMARCE1P4-201ENST00000523647 WNK1Q9H4A3 2382 aa0.78□□□□□ -2.28
SMARCE1P4-201ENST00000523647 COL6A5A8TX70 2615 aa0.78□□□□□ -2.29
SMARCE1P4-201ENST00000523647 ZZEF1O43149 2961 aa0.77□□□□□ -2.29
SMARCE1P4-201ENST00000523647 TACC2O95359 2948 aa0.77□□□□□ -2.29
SMARCE1P4-201ENST00000523647 LPAP08519 4548 aa0.76□□□□□ -2.29
SMARCE1P4-201ENST00000523647 VPS13DQ5THJ4 4388 aa0.76□□□□□ -2.29
SMARCE1P4-201ENST00000523647 GCN1Q92616 2671 aaKnown RBP0.76□□□□□ -2.29
SMARCE1P4-201ENST00000523647 STAB1Q9NY15 2570 aa0.75□□□□□ -2.29
SMARCE1P4-201ENST00000523647 TTTY10Q9BZA0 68 aa0.75□□□□□ -2.29
SMARCE1P4-201ENST00000523647 DMBT1Q9UGM3 2413 aaPredicted RBP0.75□□□□□ -2.29
SMARCE1P4-201ENST00000523647 DNAH3Q8TD57 4116 aa0.74□□□□□ -2.29
SMARCE1P4-201ENST00000523647 SPENQ96T58 3664 aaKnown RBP0.74□□□□□ -2.29
SMARCE1P4-201ENST00000523647 DMXL1Q9Y485 3027 aa0.74□□□□□ -2.29
SMARCE1P4-201ENST00000523647 SPRR2BP35325 72 aa0.74□□□□□ -2.29
SMARCE1P4-201ENST00000523647 NSD1Q96L73 2696 aaPredicted RBP0.74□□□□□ -2.29
SMARCE1P4-201ENST00000523647 FLNBO75369 2602 aaKnown RBP0.74□□□□□ -2.29
SMARCE1P4-201ENST00000523647 COL7A1Q02388 2944 aa0.74□□□□□ -2.29
SMARCE1P4-201ENST00000523647 HSPG2P98160 4391 aa0.73□□□□□ -2.29
SMARCE1P4-201ENST00000523647 PRCDQ00LT1 54 aa0.73□□□□□ -2.29
SMARCE1P4-201ENST00000523647 CUBNO60494 3623 aa0.72□□□□□ -2.29
SMARCE1P4-201ENST00000523647 HRNRQ86YZ3 2850 aaPredicted RBP0.72□□□□□ -2.29
SMARCE1P4-201ENST00000523647 PKHD1L1Q86WI1 4243 aa0.72□□□□□ -2.29
SMARCE1P4-201ENST00000523647 ANK3Q12955 4377 aaKnown RBP0.71□□□□□ -2.3
SMARCE1P4-201ENST00000523647 HMCN1Q96RW7 5635 aa0.71□□□□□ -2.3
SMARCE1P4-201ENST00000523647 CACNA1AO00555 2505 aa0.71□□□□□ -2.3
SMARCE1P4-201ENST00000523647 HECTD4Q9Y4D8 3996 aa0.71□□□□□ -2.3
SMARCE1P4-201ENST00000523647 DYNC2H1Q8NCM8 4307 aaKnown RBP0.7□□□□□ -2.3
SMARCE1P4-201ENST00000523647 USP24Q9UPU5 2620 aa0.7□□□□□ -2.3
SMARCE1P4-201ENST00000523647 DNAH2Q9P225 4427 aa0.7□□□□□ -2.3
SMARCE1P4-201ENST00000523647 APC2O95996 2303 aa0.7□□□□□ -2.3
SMARCE1P4-201ENST00000523647 TENM2Q9NT68 2774 aa0.7□□□□□ -2.3
SMARCE1P4-201ENST00000523647 DCHS2Q6V1P9 2916 aa0.69□□□□□ -2.3
SMARCE1P4-201ENST00000523647 DEFB110Q30KQ9 67 aa0.69□□□□□ -2.3
SMARCE1P4-201ENST00000523647 TENM3Q9P273 2699 aa0.68□□□□□ -2.3
SMARCE1P4-201ENST00000523647 ACACAQ13085 2346 aa0.68□□□□□ -2.3
SMARCE1P4-201ENST00000523647 ANKRD11Q6UB99 2663 aaPredicted RBP0.68□□□□□ -2.3
SMARCE1P4-201ENST00000523647 FRYQ5TBA9 3013 aa0.67□□□□□ -2.3
SMARCE1P4-201ENST00000523647 MTORP42345 2549 aa0.67□□□□□ -2.3
SMARCE1P4-201ENST00000523647 EPG5Q9HCE0 2579 aa0.67□□□□□ -2.3
SMARCE1P4-201ENST00000523647 CRYBG3Q68DQ2 2970 aa0.66□□□□□ -2.3
SMARCE1P4-201ENST00000523647 SPTBN4Q9H254 2564 aa0.66□□□□□ -2.3
SMARCE1P4-201ENST00000523647 NBPF19A0A087WUL8 3843 aa0.66□□□□□ -2.3
SMARCE1P4-201ENST00000523647 KRTAP8-1Q8IUC2 63 aa0.66□□□□□ -2.3
SMARCE1P4-201ENST00000523647 DEFB104AQ8WTQ1 72 aa0.66□□□□□ -2.3
SMARCE1P4-201ENST00000523647 COL12A1Q99715 3063 aa0.66□□□□□ -2.3
SMARCE1P4-201ENST00000523647 DNAH9Q9NYC9 4486 aa0.66□□□□□ -2.3
SMARCE1P4-201ENST00000523647 RIF1Q5UIP0 2472 aaKnown RBP0.65□□□□□ -2.3
SMARCE1P4-201ENST00000523647 DNAH8Q96JB1 4490 aa0.65□□□□□ -2.3
SMARCE1P4-201ENST00000523647 RANBP2P49792 3224 aaKnown RBP0.65□□□□□ -2.31
SMARCE1P4-201ENST00000523647 K7EIM0 57 aa0.65□□□□□ -2.31
SMARCE1P4-201ENST00000523647 MT1AP04731 61 aa0.65□□□□□ -2.31
SMARCE1P4-201ENST00000523647 NBEAL2Q6ZNJ1 2754 aa0.65□□□□□ -2.31
SMARCE1P4-201ENST00000523647 FLGP20930 4061 aaPredicted RBP0.65□□□□□ -2.31
SMARCE1P4-201ENST00000523647 SONP18583 2426 aaKnown RBP0.65□□□□□ -2.31
SMARCE1P4-201ENST00000523647 NCOR2Q9Y618 2525 aa0.65□□□□□ -2.31
SMARCE1P4-201ENST00000523647 H3BSH0 61 aa0.64□□□□□ -2.31
SMARCE1P4-201ENST00000523647 SPART-AS1P0CW21 52 aa0.64□□□□□ -2.31
SMARCE1P4-201ENST00000523647 SPRR2AP35326 72 aa0.64□□□□□ -2.31
SMARCE1P4-201ENST00000523647 KALRNO60229 2985 aa0.64□□□□□ -2.31
SMARCE1P4-201ENST00000523647 APOBP04114 4563 aaKnown RBP0.64□□□□□ -2.31
SMARCE1P4-201ENST00000523647 NBEAQ8NFP9 2946 aa0.64□□□□□ -2.31
SMARCE1P4-201ENST00000523647 UTP20O75691 2785 aaKnown RBP0.63□□□□□ -2.31
SMARCE1P4-201ENST00000523647 KRTAP6-2Q3LI66 62 aa0.62□□□□□ -2.31
SMARCE1P4-201ENST00000523647 HIVEP1P15822 2718 aa0.62□□□□□ -2.31
SMARCE1P4-201ENST00000523647 LRRK2Q5S007 2527 aa0.62□□□□□ -2.31
SMARCE1P4-201ENST00000523647 ZFHX4Q86UP3 3567 aa0.61□□□□□ -2.31
SMARCE1P4-201ENST00000523647 ITPR3Q14573 2671 aa0.61□□□□□ -2.31
SMARCE1P4-201ENST00000523647 USP9YO00507 2555 aaPredicted RBP0.6□□□□□ -2.31
SMARCE1P4-201ENST00000523647 ANKHD1Q8IWZ3 2542 aaKnown RBP0.6□□□□□ -2.31
SMARCE1P4-201ENST00000523647 LAMA5O15230 3695 aa0.6□□□□□ -2.31
SMARCE1P4-201ENST00000523647 DNAH6Q9C0G6 4158 aa0.6□□□□□ -2.31
SMARCE1P4-201ENST00000523647 CCDC168Q8NDH2 2452 aa0.6□□□□□ -2.31
SMARCE1P4-201ENST00000523647 IGSF10Q6WRI0 2623 aa0.6□□□□□ -2.31
SMARCE1P4-201ENST00000523647 CELSR3Q9NYQ7 3312 aa0.59□□□□□ -2.31
SMARCE1P4-201ENST00000523647 FAM186AA6NE01 2351 aa0.59□□□□□ -2.31
SMARCE1P4-201ENST00000523647 SPTBN5Q9NRC6 3674 aaKnown RBP0.59□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms