RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 CEND1Q8N111 149 aa12.37□□□□□ -0.43
PVT1-219ENST00000523427 C2orf91Q6ZV80 131 aa12.36□□□□□ -0.43
PVT1-219ENST00000523427 PAM16Q9Y3D7 125 aa12.36□□□□□ -0.43
PVT1-219ENST00000523427 TMEM256-PLSCR3K7ERE1 68 aa12.33□□□□□ -0.44
PVT1-219ENST00000523427 SPATA45Q537H7 98 aa12.33□□□□□ -0.44
PVT1-219ENST00000523427 TMEM238LA0A1B0GVL6 79 aa12.32□□□□□ -0.44
PVT1-219ENST00000523427 A6NJY4 79 aa12.32□□□□□ -0.44
PVT1-219ENST00000523427 PSMB2P49721 201 aa12.31□□□□□ -0.44
PVT1-219ENST00000523427 FXYD2P54710 66 aa12.31□□□□□ -0.44
PVT1-219ENST00000523427 LYRM7Q5U5X0 104 aa12.31□□□□□ -0.44
PVT1-219ENST00000523427 H3BQ85 93 aa12.3□□□□□ -0.44
PVT1-219ENST00000523427 UBE2V1Q13404 147 aa12.22□□□□□ -0.45
PVT1-219ENST00000523427 VAMP8Q9BV40 100 aa12.21□□□□□ -0.45
PVT1-219ENST00000523427 K7ERJ3 54 aa12.2□□□□□ -0.46
PVT1-219ENST00000523427 J3KT08 172 aa12.19□□□□□ -0.46
PVT1-219ENST00000523427 COX6CP09669 75 aa12.18□□□□□ -0.46
PVT1-219ENST00000523427 RBM3P98179 157 aaKnown RBP12.18□□□□□ -0.46
PVT1-219ENST00000523427 DSCR8Q96T75 97 aa12.18□□□□□ -0.46
PVT1-219ENST00000523427 NDUFB1O75438 58 aa12.17□□□□□ -0.46
PVT1-219ENST00000523427 S100A1P23297 94 aa12.16□□□□□ -0.46
PVT1-219ENST00000523427 C8orf17Q9NRJ1 99 aa12.13□□□□□ -0.47
PVT1-219ENST00000523427 NEBP20929 6669 aa12.11□□□□□ -0.47
PVT1-219ENST00000523427 H1FX-AS1Q4G0G2 97 aa12.09□□□□□ -0.47
PVT1-219ENST00000523427 C9JAW5 83 aa12.08□□□□□ -0.48
PVT1-219ENST00000523427 Q6ZQT0 140 aa12.08□□□□□ -0.48
PVT1-219ENST00000523427 IGKV3D-7A0A0C4DH55 119 aa12.06□□□□□ -0.48
PVT1-219ENST00000523427 SCGB1C2P0DMR2 95 aa12.03□□□□□ -0.48
PVT1-219ENST00000523427 HSD52Q0P140 79 aa12.03□□□□□ -0.48
PVT1-219ENST00000523427 Q6ZVQ6 151 aa12.03□□□□□ -0.48
PVT1-219ENST00000523427 C21orf62-AS1Q17RA5 79 aa12.02□□□□□ -0.49
PVT1-219ENST00000523427 BAALC-AS2P0C853 105 aa11.99□□□□□ -0.49
PVT1-219ENST00000523427 A6NN06 94 aa11.93□□□□□ -0.5
PVT1-219ENST00000523427 MUC12Q9UKN1 5478 aa11.92□□□□□ -0.5
PVT1-219ENST00000523427 NDUFS5O43920 106 aa11.89□□□□□ -0.51
PVT1-219ENST00000523427 MRPL34Q9BQ48 92 aaKnown RBP11.89□□□□□ -0.51
PVT1-219ENST00000523427 IGKV2D-30A0A075B6S6 120 aa11.88□□□□□ -0.51
PVT1-219ENST00000523427 IGKV2-30P06310 120 aa11.88□□□□□ -0.51
PVT1-219ENST00000523427 PRR15Q8IV56 129 aa11.88□□□□□ -0.51
PVT1-219ENST00000523427 KRTAP20-1Q3LI63 56 aa11.85□□□□□ -0.51
PVT1-219ENST00000523427 TMEM254Q8TBM7 123 aa11.85□□□□□ -0.51
PVT1-219ENST00000523427 MMP24-AS1A0A0U1RRL7 71 aa11.83□□□□□ -0.52
PVT1-219ENST00000523427 FAM236AA0A1B0GUQ0 79 aa11.81□□□□□ -0.52
PVT1-219ENST00000523427 FAM236BA0A1B0GV22 79 aa11.81□□□□□ -0.52
PVT1-219ENST00000523427 LOC110117498A0A087WWA1 95 aa11.78□□□□□ -0.52
PVT1-219ENST00000523427 JMJD7-PLA2G4BH0Y9G9 81 aa11.78□□□□□ -0.52
PVT1-219ENST00000523427 NREPQ16612 68 aa11.78□□□□□ -0.52
PVT1-219ENST00000523427 A0A1B0GW54 56 aa11.77□□□□□ -0.53
PVT1-219ENST00000523427 hDV103S1A0JD37 113 aa11.77□□□□□ -0.53
PVT1-219ENST00000523427 MT1BP07438 61 aa11.77□□□□□ -0.53
PVT1-219ENST00000523427 C5orf47Q569G3 176 aa11.76□□□□□ -0.53
PVT1-219ENST00000523427 C7orf65Q6ZTY9 151 aa11.75□□□□□ -0.53
PVT1-219ENST00000523427 C14orf132Q9NPU4 83 aa11.75□□□□□ -0.53
PVT1-219ENST00000523427 Q5VV11 94 aa11.74□□□□□ -0.53
PVT1-219ENST00000523427 PYY3Q5JQD4 70 aa11.73□□□□□ -0.53
PVT1-219ENST00000523427 Q5W150 140 aa11.73□□□□□ -0.53
PVT1-219ENST00000523427 C4orf26Q17RF5 130 aa11.72□□□□□ -0.53
PVT1-219ENST00000523427 ATXN8Q156A1 80 aa11.71□□□□□ -0.53
PVT1-219ENST00000523427 UQCR10Q9UDW1 63 aa11.71□□□□□ -0.53
PVT1-219ENST00000523427 K7EQZ3 153 aa11.7□□□□□ -0.54
PVT1-219ENST00000523427 PDE6GP18545 87 aa11.7□□□□□ -0.54
PVT1-219ENST00000523427 NAA38Q9BRA0 125 aaKnown RBP11.68□□□□□ -0.54
PVT1-219ENST00000523427 KRTAP10-5P60370 271 aa11.61□□□□□ -0.55
PVT1-219ENST00000523427 KRTAP19-8Q3LI54 63 aa11.6□□□□□ -0.55
PVT1-219ENST00000523427 SPRR2GQ9BYE4 73 aa11.57□□□□□ -0.56
PVT1-219ENST00000523427 KRTAP5-9P26371 169 aa11.56□□□□□ -0.56
PVT1-219ENST00000523427 KMT2DO14686 5537 aa11.55□□□□□ -0.56
PVT1-219ENST00000523427 HCG22E2RYF7 251 aa11.53□□□□□ -0.56
PVT1-219ENST00000523427 S4R3F8 94 aa11.53□□□□□ -0.56
PVT1-219ENST00000523427 MDN1Q9NU22 5596 aa11.53□□□□□ -0.56
PVT1-219ENST00000523427 BPY2O14599 106 aa11.51□□□□□ -0.57
PVT1-219ENST00000523427 CSAG1Q6PB30 78 aa11.51□□□□□ -0.57
PVT1-219ENST00000523427 CASC2Q6XLA1 102 aa11.48□□□□□ -0.57
PVT1-219ENST00000523427 Q8N9L7 120 aa11.48□□□□□ -0.57
PVT1-219ENST00000523427 KRTAP3-1Q9BYR8 98 aa11.47□□□□□ -0.57
PVT1-219ENST00000523427 LCA10Q71F78 164 aa11.44□□□□□ -0.58
PVT1-219ENST00000523427 IMUPQ9GZP8 106 aa11.44□□□□□ -0.58
PVT1-219ENST00000523427 C1orf64Q8NEQ6 169 aa11.4□□□□□ -0.58
PVT1-219ENST00000523427 KLKP1Q107X0 134 aa11.39□□□□□ -0.59
PVT1-219ENST00000523427 CXCL6P80162 114 aa11.38□□□□□ -0.59
PVT1-219ENST00000523427 M0R143 59 aa11.36□□□□□ -0.59
PVT1-219ENST00000523427 KRTAP2-3P0C7H8 128 aa11.35□□□□□ -0.59
PVT1-219ENST00000523427 KRTAP2-4Q9BYR9 128 aa11.35□□□□□ -0.59
PVT1-219ENST00000523427 TMA7Q9Y2S6 64 aaKnown RBP11.26□□□□□ -0.61
PVT1-219ENST00000523427 TSTD3H0UI37 97 aa11.25□□□□□ -0.61
PVT1-219ENST00000523427 SPRR2FQ96RM1 72 aa11.21□□□□□ -0.61
PVT1-219ENST00000523427 H3BT86 120 aa11.2□□□□□ -0.62
PVT1-219ENST00000523427 SPRR2EP22531 72 aa11.18□□□□□ -0.62
PVT1-219ENST00000523427 SPRR2BP35325 72 aa11.18□□□□□ -0.62
PVT1-219ENST00000523427 SPRR2AP35326 72 aa11.18□□□□□ -0.62
PVT1-219ENST00000523427 SMCPP49901 116 aaPredicted RBP11.18□□□□□ -0.62
PVT1-219ENST00000523427 KRTAP3-3Q9BYR6 98 aa11.18□□□□□ -0.62
PVT1-219ENST00000523427 BATFQ16520 125 aa11.15□□□□□ -0.62
PVT1-219ENST00000523427 CRIPTQ9P021 101 aa11.13□□□□□ -0.63
PVT1-219ENST00000523427 A0A087WVE0 104 aa11.07□□□□□ -0.64
PVT1-219ENST00000523427 C9orf118A6NHY6 69 aa11□□□□□ -0.65
PVT1-219ENST00000523427 UBL5Q9BZL1 73 aa11□□□□□ -0.65
PVT1-219ENST00000523427 A0A1W2PPM0 123 aa10.98□□□□□ -0.65
PVT1-219ENST00000523427 TP53AIP1Q9HCN2 124 aa10.97□□□□□ -0.65
PVT1-219ENST00000523427 KRTAP8-1Q8IUC2 63 aa10.95□□□□□ -0.66
PVT1-219ENST00000523427 KRTAP2-2Q9BYT5 123 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms