RNA–Protein interactions for RNA: ENST00000522912.5

SREK1-212, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-212ENST00000522912 NOTCH2NLQ7Z3S9 236 aa9.69□□□□□ -0.86
SREK1-212ENST00000522912 A0A0U1RQV1 116 aa9.68□□□□□ -0.86
SREK1-212ENST00000522912 H7BZZ5 65 aa9.68□□□□□ -0.86
SREK1-212ENST00000522912 C1orf195Q5TG92 126 aa9.68□□□□□ -0.86
SREK1-212ENST00000522912 C4orf48Q5BLP8 95 aa9.65□□□□□ -0.86
SREK1-212ENST00000522912 C5orf47Q569G3 176 aa9.64□□□□□ -0.87
SREK1-212ENST00000522912 LIMD2Q9BT23 127 aa9.64□□□□□ -0.87
SREK1-212ENST00000522912 SPINK1P00995 79 aa9.62□□□□□ -0.87
SREK1-212ENST00000522912 LINC00304Q8N9R0 145 aa9.61□□□□□ -0.87
SREK1-212ENST00000522912 NDUFC1O43677 76 aa9.6□□□□□ -0.87
SREK1-212ENST00000522912 PKHD1L1Q86WI1 4243 aa9.6□□□□□ -0.87
SREK1-212ENST00000522912 HSPG2P98160 4391 aa9.6□□□□□ -0.87
SREK1-212ENST00000522912 ZCCHC13Q8WW36 166 aaKnown RBP9.6□□□□□ -0.87
SREK1-212ENST00000522912 MRPL34Q9BQ48 92 aaKnown RBP9.59□□□□□ -0.87
SREK1-212ENST00000522912 FAM229AH3BQW9 127 aa9.58□□□□□ -0.88
SREK1-212ENST00000522912 FAM236DA0A1B0GTK5 79 aa9.58□□□□□ -0.88
SREK1-212ENST00000522912 FAM236CP0DP71 79 aa9.58□□□□□ -0.88
SREK1-212ENST00000522912 C8orf87E5RJ46 101 aa9.56□□□□□ -0.88
SREK1-212ENST00000522912 H0Y9P7 68 aa9.56□□□□□ -0.88
SREK1-212ENST00000522912 SPAG11AQ6PDA7 123 aa9.56□□□□□ -0.88
SREK1-212ENST00000522912 MP68P56378 58 aa9.55□□□□□ -0.88
SREK1-212ENST00000522912 Q5VSD8 79 aa9.55□□□□□ -0.88
SREK1-212ENST00000522912 NDUFS5O43920 106 aa9.54□□□□□ -0.88
SREK1-212ENST00000522912 RPS29P62273 56 aaKnown RBP9.54□□□□□ -0.88
SREK1-212ENST00000522912 RPS28P62857 69 aaKnown RBP9.54□□□□□ -0.88
SREK1-212ENST00000522912 TP53AIP1Q9HCN2 124 aa9.54□□□□□ -0.88
SREK1-212ENST00000522912 LINC00313P59037 77 aa9.53□□□□□ -0.88
SREK1-212ENST00000522912 LINC00208Q96KT6 92 aa9.53□□□□□ -0.88
SREK1-212ENST00000522912 KRTAP17-1Q9BYP8 105 aa9.53□□□□□ -0.88
SREK1-212ENST00000522912 TRAV22A0A0B4J277 110 aa9.51□□□□□ -0.89
SREK1-212ENST00000522912 RYR1P21817 5038 aa9.5□□□□□ -0.89
SREK1-212ENST00000522912 H3BPC8 53 aa9.49□□□□□ -0.89
SREK1-212ENST00000522912 OXTP01178 125 aa9.47□□□□□ -0.89
SREK1-212ENST00000522912 C1orf64Q8NEQ6 169 aa9.46□□□□□ -0.89
SREK1-212ENST00000522912 KRTAP16-1A8MUX0 517 aa9.46□□□□□ -0.9
SREK1-212ENST00000522912 ATP5EP56381 51 aaPredicted RBP9.45□□□□□ -0.9
SREK1-212ENST00000522912 Q5W150 140 aa9.43□□□□□ -0.9
SREK1-212ENST00000522912 LRP1Q07954 4544 aaKnown RBP9.43□□□□□ -0.9
SREK1-212ENST00000522912 Q8N9P0 234 aaPredicted RBP9.43□□□□□ -0.9
SREK1-212ENST00000522912 SERP1Q9Y6X1 66 aa9.43□□□□□ -0.9
SREK1-212ENST00000522912 KRTAP13-3Q3SY46 172 aa9.41□□□□□ -0.9
SREK1-212ENST00000522912 KRTAP10-8P60410 259 aa9.4□□□□□ -0.9
SREK1-212ENST00000522912 KIAA1109Q2LD37 5005 aa9.4□□□□□ -0.91
SREK1-212ENST00000522912 EPPK1P58107 5090 aaKnown RBP9.39□□□□□ -0.91
SREK1-212ENST00000522912 TNXBP22105 4242 aa9.39□□□□□ -0.91
SREK1-212ENST00000522912 Q8N1X5 172 aa9.39□□□□□ -0.91
SREK1-212ENST00000522912 FLG2Q5D862 2391 aaPredicted RBP9.37□□□□□ -0.91
SREK1-212ENST00000522912 RETNLBQ9BQ08 111 aa9.35□□□□□ -0.91
SREK1-212ENST00000522912 FAT3Q8TDW7 4589 aa9.34□□□□□ -0.91
SREK1-212ENST00000522912 PRR4Q16378 134 aa9.32□□□□□ -0.92
SREK1-212ENST00000522912 PCOTHQ58A44 107 aa9.31□□□□□ -0.92
SREK1-212ENST00000522912 SPANXA2-OT1Q8N9U9 137 aa9.29□□□□□ -0.92
SREK1-212ENST00000522912 LOC101927531A0A1B0GV80 90 aa9.29□□□□□ -0.92
SREK1-212ENST00000522912 CYP4F30PQ9H0H9 118 aa9.29□□□□□ -0.92
SREK1-212ENST00000522912 C9orf92A6NGG3 77 aa9.27□□□□□ -0.93
SREK1-212ENST00000522912 IGLV7-46A0A075B6I9 117 aa9.24□□□□□ -0.93
SREK1-212ENST00000522912 MT1HL1P0DM35 61 aa9.24□□□□□ -0.93
SREK1-212ENST00000522912 SMIM26A0A096LP01 95 aa9.22□□□□□ -0.93
SREK1-212ENST00000522912 MYCBP2O75592 4640 aa9.22□□□□□ -0.93
SREK1-212ENST00000522912 DMBT1Q9UGM3 2413 aaPredicted RBP9.21□□□□□ -0.94
SREK1-212ENST00000522912 IGKV2-30P06310 120 aa9.21□□□□□ -0.94
SREK1-212ENST00000522912 FP248Q71RG6 208 aaPredicted RBP9.19□□□□□ -0.94
SREK1-212ENST00000522912 C20orf166-AS1Q96NR2 134 aa9.19□□□□□ -0.94
SREK1-212ENST00000522912 A8MUU9 505 aa9.18□□□□□ -0.94
SREK1-212ENST00000522912 KRTAP4-5Q9BYR2 181 aa9.17□□□□□ -0.94
SREK1-212ENST00000522912 C4orf26Q17RF5 130 aa9.17□□□□□ -0.94
SREK1-212ENST00000522912 IGKV2D-30A0A075B6S6 120 aa9.13□□□□□ -0.95
SREK1-212ENST00000522912 HRES1P13985 223 aa9.12□□□□□ -0.95
SREK1-212ENST00000522912 MPLKIPQ8TAP9 179 aa9.08□□□□□ -0.96
SREK1-212ENST00000522912 Q75L30 129 aa9.06□□□□□ -0.96
SREK1-212ENST00000522912 COA5Q86WW8 74 aa9.06□□□□□ -0.96
SREK1-212ENST00000522912 C7orf65Q6ZTY9 151 aa9.04□□□□□ -0.96
SREK1-212ENST00000522912 DMAC1Q96GE9 116 aa9□□□□□ -0.97
SREK1-212ENST00000522912 Q1T7F1 81 aa8.97□□□□□ -0.97
SREK1-212ENST00000522912 XP32Q5T750 250 aa8.97□□□□□ -0.97
SREK1-212ENST00000522912 ACYP2P14621 99 aa8.96□□□□□ -0.98
SREK1-212ENST00000522912 RPL37P61927 97 aaKnown RBP8.93□□□□□ -0.98
SREK1-212ENST00000522912 SPINK7P58062 85 aa8.93□□□□□ -0.98
SREK1-212ENST00000522912 BIRC6Q9NR09 4857 aa8.92□□□□□ -0.98
SREK1-212ENST00000522912 ATP11AUNQ6ZP68 121 aa8.91□□□□□ -0.98
SREK1-212ENST00000522912 ABCA13Q86UQ4 5058 aa8.9□□□□□ -0.98
SREK1-212ENST00000522912 HERC2O95714 4834 aa8.88□□□□□ -0.99
SREK1-212ENST00000522912 V9GYY9 64 aa8.88□□□□□ -0.99
SREK1-212ENST00000522912 PSPHP1O15172 72 aa8.85□□□□□ -0.99
SREK1-212ENST00000522912 TPRXLQ17RH7 258 aa8.85□□□□□ -0.99
SREK1-212ENST00000522912 CHKB-CPT1BH3BT56 60 aa8.81□□□□□ -1
SREK1-212ENST00000522912 A8MUN3 132 aa8.81□□□□□ -1
SREK1-212ENST00000522912 J3QL48 77 aa8.8□□□□□ -1
SREK1-212ENST00000522912 KRTAP3-1Q9BYR8 98 aa8.8□□□□□ -1
SREK1-212ENST00000522912 LPAP08519 4548 aa8.77□□□□□ -1.01
SREK1-212ENST00000522912 PRR15LQ9BU68 103 aa8.76□□□□□ -1.01
SREK1-212ENST00000522912 LRP2P98164 4655 aa8.75□□□□□ -1.01
SREK1-212ENST00000522912 LINC01558Q9Y6Z2 57 aa8.75□□□□□ -1.01
SREK1-212ENST00000522912 Q5VV11 94 aa8.75□□□□□ -1.01
SREK1-212ENST00000522912 BRK1Q8WUW1 75 aa8.73□□□□□ -1.01
SREK1-212ENST00000522912 COX6B2Q6YFQ2 88 aa8.72□□□□□ -1.01
SREK1-212ENST00000522912 SVIPQ8NHG7 77 aa8.72□□□□□ -1.01
SREK1-212ENST00000522912 PRO0628Q9UI54 55 aa8.66□□□□□ -1.02
SREK1-212ENST00000522912 A6NED7 52 aa8.55□□□□□ -1.04
SREK1-212ENST00000522912 SPTSSBQ8NFR3 76 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms