RNA–Protein interactions for RNA: ENST00000522796.1

HMGB4-204, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGB4, Length 2,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-204ENST00000522796 KRTAP24-1Q3LI83 254 aa4.51□□□□□ -1.69
HMGB4-204ENST00000522796 CUBNO60494 3623 aa4.51□□□□□ -1.69
HMGB4-204ENST00000522796 H3BNG1 76 aa4.51□□□□□ -1.69
HMGB4-204ENST00000522796 PRO2289Q9P1D8 64 aa4.5□□□□□ -1.69
HMGB4-204ENST00000522796 ANK3Q12955 4377 aaKnown RBP4.5□□□□□ -1.69
HMGB4-204ENST00000522796 RPL37P61927 97 aaKnown RBP4.5□□□□□ -1.69
HMGB4-204ENST00000522796 COX6B2Q6YFQ2 88 aa4.49□□□□□ -1.69
HMGB4-204ENST00000522796 FLNAP21333 2647 aaKnown RBP4.49□□□□□ -1.69
HMGB4-204ENST00000522796 TEX15Q9BXT5 2789 aa4.49□□□□□ -1.69
HMGB4-204ENST00000522796 MAPK1IP1LQ8NDC0 245 aa4.49□□□□□ -1.69
HMGB4-204ENST00000522796 CSPG4Q6UVK1 2322 aa4.48□□□□□ -1.69
HMGB4-204ENST00000522796 C14orf177Q52M58 125 aa4.48□□□□□ -1.69
HMGB4-204ENST00000522796 SETXQ7Z333 2677 aaKnown RBP4.48□□□□□ -1.69
HMGB4-204ENST00000522796 NAV2Q8IVL1 2488 aa4.47□□□□□ -1.69
HMGB4-204ENST00000522796 F8P00451 2351 aa4.47□□□□□ -1.69
HMGB4-204ENST00000522796 DEFB135Q30KP9 77 aa4.47□□□□□ -1.69
HMGB4-204ENST00000522796 KRTAP1-3Q8IUG1 177 aa4.46□□□□□ -1.69
HMGB4-204ENST00000522796 TLN2Q9Y4G6 2542 aa4.46□□□□□ -1.7
HMGB4-204ENST00000522796 CCDC168Q8NDH2 2452 aa4.46□□□□□ -1.7
HMGB4-204ENST00000522796 BAHCC1Q9P281 2608 aa4.45□□□□□ -1.7
HMGB4-204ENST00000522796 KRTAP13-1Q8IUC0 172 aa4.45□□□□□ -1.7
HMGB4-204ENST00000522796 MXRA5Q9NR99 2828 aa4.45□□□□□ -1.7
HMGB4-204ENST00000522796 SPINK6Q6UWN8 80 aa4.45□□□□□ -1.7
HMGB4-204ENST00000522796 WWC2-AS2Q96NR7 200 aa4.44□□□□□ -1.7
HMGB4-204ENST00000522796 MYO9AB2RTY4 2548 aa4.44□□□□□ -1.7
HMGB4-204ENST00000522796 JMJD1CQ15652 2540 aa4.44□□□□□ -1.7
HMGB4-204ENST00000522796 SPACA4Q8TDM5 124 aa4.44□□□□□ -1.7
HMGB4-204ENST00000522796 FN1P02751 2386 aaKnown RBP4.43□□□□□ -1.7
HMGB4-204ENST00000522796 FBN1P35555 2871 aaKnown RBP4.43□□□□□ -1.7
HMGB4-204ENST00000522796 R4GN34 69 aa4.42□□□□□ -1.7
HMGB4-204ENST00000522796 ACANP16112 2415 aa4.42□□□□□ -1.7
HMGB4-204ENST00000522796 CSMD3Q7Z407 3707 aa4.42□□□□□ -1.7
HMGB4-204ENST00000522796 FLNBO75369 2602 aaKnown RBP4.4□□□□□ -1.7
HMGB4-204ENST00000522796 PLAC4Q8WY50 150 aa4.4□□□□□ -1.71
HMGB4-204ENST00000522796 SONP18583 2426 aaKnown RBP4.39□□□□□ -1.71
HMGB4-204ENST00000522796 SMR3AQ99954 134 aa4.39□□□□□ -1.71
HMGB4-204ENST00000522796 HIVEP1P15822 2718 aa4.38□□□□□ -1.71
HMGB4-204ENST00000522796 KRTAP1-1Q07627 177 aa4.38□□□□□ -1.71
HMGB4-204ENST00000522796 SRRM2Q9UQ35 2752 aaKnown RBP4.38□□□□□ -1.71
HMGB4-204ENST00000522796 NOTCH2Q04721 2471 aa4.38□□□□□ -1.71
HMGB4-204ENST00000522796 NBEAL2Q6ZNJ1 2754 aa4.37□□□□□ -1.71
HMGB4-204ENST00000522796 NSD1Q96L73 2696 aaPredicted RBP4.37□□□□□ -1.71
HMGB4-204ENST00000522796 MTORP42345 2549 aa4.35□□□□□ -1.71
HMGB4-204ENST00000522796 VWFP04275 2813 aa4.35□□□□□ -1.71
HMGB4-204ENST00000522796 XP32Q5T750 250 aa4.34□□□□□ -1.71
HMGB4-204ENST00000522796 TEP1Q99973 2627 aaKnown RBP4.33□□□□□ -1.72
HMGB4-204ENST00000522796 HIVEP2P31629 2446 aa4.33□□□□□ -1.72
HMGB4-204ENST00000522796 NIPBLQ6KC79 2804 aaeCLIP4.3□□□□□ -1.72
HMGB4-204ENST00000522796 MAST4O15021 2626 aa4.3□□□□□ -1.72
HMGB4-204ENST00000522796 TENM1Q9UKZ4 2725 aa4.29□□□□□ -1.72
HMGB4-204ENST00000522796 S4R3F8 94 aa4.29□□□□□ -1.72
HMGB4-204ENST00000522796 SETD2Q9BYW2 2564 aaPredicted RBP4.28□□□□□ -1.72
HMGB4-204ENST00000522796 A0A0D9SG42 100 aa4.27□□□□□ -1.73
HMGB4-204ENST00000522796 Q6ZRN7 208 aaPredicted RBP4.27□□□□□ -1.73
HMGB4-204ENST00000522796 APLNQ9ULZ1 77 aa4.27□□□□□ -1.73
HMGB4-204ENST00000522796 KRTAP10-8P60410 259 aa4.26□□□□□ -1.73
HMGB4-204ENST00000522796 CMYA5Q8N3K9 4069 aa4.26□□□□□ -1.73
HMGB4-204ENST00000522796 KRTAP13-4Q3LI77 160 aa4.26□□□□□ -1.73
HMGB4-204ENST00000522796 LCE2BO14633 110 aa4.24□□□□□ -1.73
HMGB4-204ENST00000522796 MEGF8Q7Z7M0 2845 aa4.24□□□□□ -1.73
HMGB4-204ENST00000522796 KRTAP3-1Q9BYR8 98 aa4.23□□□□□ -1.73
HMGB4-204ENST00000522796 DNAH1Q9P2D7 4330 aa4.23□□□□□ -1.73
HMGB4-204ENST00000522796 KRTAP10-6P60371 365 aaPredicted RBP4.22□□□□□ -1.73
HMGB4-204ENST00000522796 ANK2Q01484 3957 aa4.2□□□□□ -1.74
HMGB4-204ENST00000522796 TRRAPQ9Y4A5 3859 aa4.2□□□□□ -1.74
HMGB4-204ENST00000522796 ATRQ13535 2644 aa4.2□□□□□ -1.74
HMGB4-204ENST00000522796 INE1O15225 51 aa4.2□□□□□ -1.74
HMGB4-204ENST00000522796 KRTAP10-3P60369 221 aa4.2□□□□□ -1.74
HMGB4-204ENST00000522796 UBE2DNLQ8IWF7 75 aa4.2□□□□□ -1.74
HMGB4-204ENST00000522796 KRTAP12-2P59991 146 aa4.2□□□□□ -1.74
HMGB4-204ENST00000522796 STAB1Q9NY15 2570 aa4.18□□□□□ -1.74
HMGB4-204ENST00000522796 PKD1L1Q8TDX9 2849 aa4.17□□□□□ -1.74
HMGB4-204ENST00000522796 LOC100996750A0A140TA64 210 aa4.16□□□□□ -1.74
HMGB4-204ENST00000522796 KRTAP4-6Q9BYQ5 205 aa4.16□□□□□ -1.74
HMGB4-204ENST00000522796 FRAS1Q86XX4 4008 aa4.15□□□□□ -1.75
HMGB4-204ENST00000522796 DNAH3Q8TD57 4116 aa4.14□□□□□ -1.75
HMGB4-204ENST00000522796 KRTAP12-1P59990 96 aa4.14□□□□□ -1.75
HMGB4-204ENST00000522796 DNHD1Q96M86 4753 aa4.13□□□□□ -1.75
HMGB4-204ENST00000522796 COL6A5A8TX70 2615 aa4.13□□□□□ -1.75
HMGB4-204ENST00000522796 LCE2AQ5TA79 106 aaPredicted RBP4.11□□□□□ -1.75
HMGB4-204ENST00000522796 NBEAL1Q6ZS30 2694 aa4.07□□□□□ -1.76
HMGB4-204ENST00000522796 KRTAP1-5Q9BYS1 174 aa4.06□□□□□ -1.76
HMGB4-204ENST00000522796 NOTCH1P46531 2555 aa4.04□□□□□ -1.76
HMGB4-204ENST00000522796 DMBT1Q9UGM3 2413 aaPredicted RBP4.04□□□□□ -1.76
HMGB4-204ENST00000522796 TGP01266 2768 aa4.03□□□□□ -1.76
HMGB4-204ENST00000522796 COL7A1Q02388 2944 aa4.02□□□□□ -1.77
HMGB4-204ENST00000522796 HUWE1Q7Z6Z7 4374 aaKnown RBP4.02□□□□□ -1.77
HMGB4-204ENST00000522796 DNAH9Q9NYC9 4486 aa4.02□□□□□ -1.77
HMGB4-204ENST00000522796 LYSTQ99698 3801 aa4.01□□□□□ -1.77
HMGB4-204ENST00000522796 KRTAP10-11P60412 298 aa4.01□□□□□ -1.77
HMGB4-204ENST00000522796 TENM3Q9P273 2699 aa4.01□□□□□ -1.77
HMGB4-204ENST00000522796 PRKDCP78527 4128 aaKnown RBP4□□□□□ -1.77
HMGB4-204ENST00000522796 PP632Q6XCG6 107 aa4□□□□□ -1.77
HMGB4-204ENST00000522796 DNAH8Q96JB1 4490 aa3.99□□□□□ -1.77
HMGB4-204ENST00000522796 VPS13DQ5THJ4 4388 aa3.99□□□□□ -1.77
HMGB4-204ENST00000522796 SPRR5A0A1B0GTR4 108 aa3.99□□□□□ -1.77
HMGB4-204ENST00000522796 MGAM2Q2M2H8 2515 aa3.99□□□□□ -1.77
HMGB4-204ENST00000522796 KRTAP13-2Q52LG2 175 aa3.98□□□□□ -1.77
HMGB4-204ENST00000522796 DNAH10Q8IVF4 4471 aa3.96□□□□□ -1.78
HMGB4-204ENST00000522796 M0QZ58 72 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms