RNA–Protein interactions for RNA: ENST00000522730.1

CTNNA1-235, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-235ENST00000522730 LCE4AQ5TA78 99 aa5.51□□□□□ -1.53
CTNNA1-235ENST00000522730 Q5XG85 94 aa5.51□□□□□ -1.53
CTNNA1-235ENST00000522730 DSCR8Q96T75 97 aa5.51□□□□□ -1.53
CTNNA1-235ENST00000522730 KRTAP3-1Q9BYR8 98 aa5.51□□□□□ -1.53
CTNNA1-235ENST00000522730 C14orf132Q9NPU4 83 aa5.51□□□□□ -1.53
CTNNA1-235ENST00000522730 FSIP2Q5CZC0 6907 aa5.5□□□□□ -1.53
CTNNA1-235ENST00000522730 LOC110117498A0A087WWA1 95 aa5.49□□□□□ -1.53
CTNNA1-235ENST00000522730 Q6ZQT0 140 aa5.49□□□□□ -1.53
CTNNA1-235ENST00000522730 A0A1W2PNM2 257 aa5.48□□□□□ -1.53
CTNNA1-235ENST00000522730 KRTAP9-9Q9BYP9 154 aa5.48□□□□□ -1.53
CTNNA1-235ENST00000522730 KRTAP9-4Q9BYQ2 154 aa5.48□□□□□ -1.53
CTNNA1-235ENST00000522730 KRTAP9-7A8MTY7 169 aa5.47□□□□□ -1.53
CTNNA1-235ENST00000522730 CCKP06307 115 aa5.47□□□□□ -1.53
CTNNA1-235ENST00000522730 PDE6GP18545 87 aa5.47□□□□□ -1.53
CTNNA1-235ENST00000522730 RPL37P61927 97 aaKnown RBP5.47□□□□□ -1.53
CTNNA1-235ENST00000522730 MT1HP80294 61 aa5.47□□□□□ -1.53
CTNNA1-235ENST00000522730 KRTAP19-2Q3LHN2 52 aa5.47□□□□□ -1.53
CTNNA1-235ENST00000522730 COX6B2Q6YFQ2 88 aa5.47□□□□□ -1.53
CTNNA1-235ENST00000522730 M0R2T5 61 aa5.46□□□□□ -1.54
CTNNA1-235ENST00000522730 Q6Q795 121 aa5.46□□□□□ -1.54
CTNNA1-235ENST00000522730 VPS25Q9BRG1 176 aa5.45□□□□□ -1.54
CTNNA1-235ENST00000522730 TRBV7-7A0A0K0K1E9 115 aa5.44□□□□□ -1.54
CTNNA1-235ENST00000522730 KRTAP23-1A1A580 65 aa5.44□□□□□ -1.54
CTNNA1-235ENST00000522730 A0A087WSZ3 146 aa5.41□□□□□ -1.54
CTNNA1-235ENST00000522730 ATP11AUNQ6ZP68 121 aa5.41□□□□□ -1.54
CTNNA1-235ENST00000522730 A0A1B0GW54 56 aa5.4□□□□□ -1.54
CTNNA1-235ENST00000522730 CRCT1Q9UGL9 99 aa5.4□□□□□ -1.54
CTNNA1-235ENST00000522730 Q96NJ1 140 aa5.39□□□□□ -1.55
CTNNA1-235ENST00000522730 KRTAP10-6P60371 365 aaPredicted RBP5.38□□□□□ -1.55
CTNNA1-235ENST00000522730 SVIPQ8NHG7 77 aa5.38□□□□□ -1.55
CTNNA1-235ENST00000522730 SS18L2Q9UHA2 77 aa5.37□□□□□ -1.55
CTNNA1-235ENST00000522730 FAM240AA0A1B0GVK7 77 aa5.36□□□□□ -1.55
CTNNA1-235ENST00000522730 J3QR89 54 aa5.36□□□□□ -1.55
CTNNA1-235ENST00000522730 ACYP1P07311 99 aa5.36□□□□□ -1.55
CTNNA1-235ENST00000522730 LINC00846Q9NV44 126 aa5.36□□□□□ -1.55
CTNNA1-235ENST00000522730 FLGP20930 4061 aaPredicted RBP5.35□□□□□ -1.55
CTNNA1-235ENST00000522730 Q75L30 129 aa5.35□□□□□ -1.55
CTNNA1-235ENST00000522730 NREPQ16612 68 aa5.34□□□□□ -1.55
CTNNA1-235ENST00000522730 Q6ZVQ6 151 aa5.33□□□□□ -1.56
CTNNA1-235ENST00000522730 UBL5Q9BZL1 73 aa5.33□□□□□ -1.56
CTNNA1-235ENST00000522730 LINC00472Q9H8W2 130 aa5.33□□□□□ -1.56
CTNNA1-235ENST00000522730 K7ERU9 68 aa5.32□□□□□ -1.56
CTNNA1-235ENST00000522730 DSCR10P59022 87 aa5.31□□□□□ -1.56
CTNNA1-235ENST00000522730 DEFB116Q30KQ4 102 aa5.31□□□□□ -1.56
CTNNA1-235ENST00000522730 KRTAP4-8A0A0G2JLE6 195 aa5.29□□□□□ -1.56
CTNNA1-235ENST00000522730 IGKV4-1P06312 121 aa5.29□□□□□ -1.56
CTNNA1-235ENST00000522730 SIGMAR1Q99720 223 aa5.29□□□□□ -1.56
CTNNA1-235ENST00000522730 J3KT08 172 aa5.28□□□□□ -1.56
CTNNA1-235ENST00000522730 BPY2O14599 106 aa5.28□□□□□ -1.56
CTNNA1-235ENST00000522730 C20orf166-AS1Q96NR2 134 aa5.27□□□□□ -1.57
CTNNA1-235ENST00000522730 A8MUU9 505 aa5.26□□□□□ -1.57
CTNNA1-235ENST00000522730 A8MWP4 228 aa5.25□□□□□ -1.57
CTNNA1-235ENST00000522730 LINC00313P59037 77 aa5.25□□□□□ -1.57
CTNNA1-235ENST00000522730 LINC00643Q86TS7 51 aa5.25□□□□□ -1.57
CTNNA1-235ENST00000522730 IGKV3D-7A0A0C4DH55 119 aa5.24□□□□□ -1.57
CTNNA1-235ENST00000522730 CXCL6P80162 114 aa5.24□□□□□ -1.57
CTNNA1-235ENST00000522730 LCE1DQ5T752 114 aa5.24□□□□□ -1.57
CTNNA1-235ENST00000522730 KRTAP9-3Q9BYQ3 159 aa5.24□□□□□ -1.57
CTNNA1-235ENST00000522730 NDUFB1O75438 58 aa5.23□□□□□ -1.57
CTNNA1-235ENST00000522730 ATP5EP2Q5VTU8 51 aa5.23□□□□□ -1.57
CTNNA1-235ENST00000522730 IGHV6-1A0A0B4J1U7 121 aa5.22□□□□□ -1.57
CTNNA1-235ENST00000522730 FAM236DA0A1B0GTK5 79 aa5.22□□□□□ -1.57
CTNNA1-235ENST00000522730 A0A1B0GVX0 72 aa5.22□□□□□ -1.57
CTNNA1-235ENST00000522730 K7EQZ3 153 aa5.22□□□□□ -1.57
CTNNA1-235ENST00000522730 FAM236CP0DP71 79 aa5.22□□□□□ -1.57
CTNNA1-235ENST00000522730 PRR15Q8IV56 129 aa5.22□□□□□ -1.57
CTNNA1-235ENST00000522730 NOTCH2NLQ7Z3S9 236 aa5.21□□□□□ -1.58
CTNNA1-235ENST00000522730 Q8N9L7 120 aa5.21□□□□□ -1.58
CTNNA1-235ENST00000522730 KRTAP16-1A8MUX0 517 aa5.2□□□□□ -1.58
CTNNA1-235ENST00000522730 C8orf87E5RJ46 101 aa5.19□□□□□ -1.58
CTNNA1-235ENST00000522730 C8orf17Q9NRJ1 99 aa5.18□□□□□ -1.58
CTNNA1-235ENST00000522730 MT-ATP8P03928 68 aa5.17□□□□□ -1.58
CTNNA1-235ENST00000522730 HIST1H4AP62805 103 aaKnown RBP5.17□□□□□ -1.58
CTNNA1-235ENST00000522730 USH2AO75445 5202 aa5.17□□□□□ -1.58
CTNNA1-235ENST00000522730 MMP24-AS1A0A0U1RRL7 71 aa5.16□□□□□ -1.58
CTNNA1-235ENST00000522730 KRTAP9-8Q9BYQ0 159 aa5.15□□□□□ -1.59
CTNNA1-235ENST00000522730 RBM12B-AS1Q9P1G2 102 aa5.15□□□□□ -1.59
CTNNA1-235ENST00000522730 HCG22E2RYF7 251 aa5.14□□□□□ -1.59
CTNNA1-235ENST00000522730 A0A087WVE0 104 aa5.13□□□□□ -1.59
CTNNA1-235ENST00000522730 hDV103S1A0JD37 113 aa5.13□□□□□ -1.59
CTNNA1-235ENST00000522730 WFDC13Q8IUB5 93 aa5.13□□□□□ -1.59
CTNNA1-235ENST00000522730 IMUPQ9GZP8 106 aa5.13□□□□□ -1.59
CTNNA1-235ENST00000522730 SSPOA2VEC9 5147 aa5.13□□□□□ -1.59
CTNNA1-235ENST00000522730 CASC2Q6XLA1 102 aa5.12□□□□□ -1.59
CTNNA1-235ENST00000522730 TMEM254Q8TBM7 123 aa5.12□□□□□ -1.59
CTNNA1-235ENST00000522730 HRES1P13985 223 aa5.11□□□□□ -1.59
CTNNA1-235ENST00000522730 MRPL34Q9BQ48 92 aaKnown RBP5.11□□□□□ -1.59
CTNNA1-235ENST00000522730 LCE5AQ5TCM9 118 aa5.1□□□□□ -1.59
CTNNA1-235ENST00000522730 MT2AP02795 61 aa5.09□□□□□ -1.59
CTNNA1-235ENST00000522730 Q8N9P0 234 aaPredicted RBP5.09□□□□□ -1.59
CTNNA1-235ENST00000522730 KRTAP10-10P60014 251 aa5.08□□□□□ -1.6
CTNNA1-235ENST00000522730 ZCCHC13Q8WW36 166 aaKnown RBP5.08□□□□□ -1.6
CTNNA1-235ENST00000522730 KRTAP4-7Q9BYR0 210 aa5.08□□□□□ -1.6
CTNNA1-235ENST00000522730 SPINK7P58062 85 aa5.07□□□□□ -1.6
CTNNA1-235ENST00000522730 MPLKIPQ8TAP9 179 aa5.07□□□□□ -1.6
CTNNA1-235ENST00000522730 NDUFS5O43920 106 aa5.06□□□□□ -1.6
CTNNA1-235ENST00000522730 KRTAP4-9Q9BYQ8 210 aa5.06□□□□□ -1.6
CTNNA1-235ENST00000522730 MT1FP04733 61 aa5.04□□□□□ -1.6
CTNNA1-235ENST00000522730 FAM236AA0A1B0GUQ0 79 aa5.03□□□□□ -1.6
CTNNA1-235ENST00000522730 FAM236BA0A1B0GV22 79 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms