RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 DEFB116Q30KQ4 102 aa3.76□□□□□ -1.81
TRAPPC9-212ENST00000521944 KRTAP5-10Q6L8G5 202 aa3.76□□□□□ -1.81
TRAPPC9-212ENST00000521944 HMCN1Q96RW7 5635 aa3.75□□□□□ -1.81
TRAPPC9-212ENST00000521944 IGHV6-1A0A0B4J1U7 121 aa3.75□□□□□ -1.81
TRAPPC9-212ENST00000521944 FAM236AA0A1B0GUQ0 79 aa3.75□□□□□ -1.81
TRAPPC9-212ENST00000521944 FAM236BA0A1B0GV22 79 aa3.75□□□□□ -1.81
TRAPPC9-212ENST00000521944 SNHG12Q9BXW3 62 aa3.75□□□□□ -1.81
TRAPPC9-212ENST00000521944 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.74□□□□□ -1.81
TRAPPC9-212ENST00000521944 HSPB8Q9UJY1 196 aa3.74□□□□□ -1.81
TRAPPC9-212ENST00000521944 TMEM218A2RU14 115 aa3.73□□□□□ -1.81
TRAPPC9-212ENST00000521944 KRTAP9-6A8MVA2 160 aa3.73□□□□□ -1.81
TRAPPC9-212ENST00000521944 HSBP1O75506 76 aa3.73□□□□□ -1.81
TRAPPC9-212ENST00000521944 LEPROTL1O95214 131 aa3.73□□□□□ -1.81
TRAPPC9-212ENST00000521944 LCE3CQ5T5A8 94 aa3.73□□□□□ -1.81
TRAPPC9-212ENST00000521944 PPDPFLQ8WWR9 84 aa3.73□□□□□ -1.81
TRAPPC9-212ENST00000521944 LINC00472Q9H8W2 130 aa3.73□□□□□ -1.81
TRAPPC9-212ENST00000521944 AHNAK2Q8IVF2 5795 aa3.72□□□□□ -1.81
TRAPPC9-212ENST00000521944 MT1XP80297 61 aa3.72□□□□□ -1.81
TRAPPC9-212ENST00000521944 MUSTN1Q8IVN3 82 aa3.71□□□□□ -1.82
TRAPPC9-212ENST00000521944 FABP4P15090 132 aa3.7□□□□□ -1.82
TRAPPC9-212ENST00000521944 VAMP3Q15836 100 aa3.7□□□□□ -1.82
TRAPPC9-212ENST00000521944 C5orf47Q569G3 176 aa3.69□□□□□ -1.82
TRAPPC9-212ENST00000521944 IFITM1P13164 125 aa3.68□□□□□ -1.82
TRAPPC9-212ENST00000521944 NDUFV3P56181 108 aaKnown RBP3.68□□□□□ -1.82
TRAPPC9-212ENST00000521944 KRTAP12-2P59991 146 aa3.68□□□□□ -1.82
TRAPPC9-212ENST00000521944 A0A1B0GVX0 72 aa3.67□□□□□ -1.82
TRAPPC9-212ENST00000521944 C3orf79P0CE67 100 aa3.67□□□□□ -1.82
TRAPPC9-212ENST00000521944 C8orf87E5RJ46 101 aa3.66□□□□□ -1.82
TRAPPC9-212ENST00000521944 KLKP1Q107X0 134 aa3.66□□□□□ -1.82
TRAPPC9-212ENST00000521944 KRTAP5-7Q6L8G8 165 aa3.66□□□□□ -1.82
TRAPPC9-212ENST00000521944 RAB37Q96AX2 223 aa3.65□□□□□ -1.83
TRAPPC9-212ENST00000521944 YPEL4Q96NS1 127 aa3.65□□□□□ -1.83
TRAPPC9-212ENST00000521944 H3BMG7 143 aa3.64□□□□□ -1.83
TRAPPC9-212ENST00000521944 IGKV3D-7A0A0C4DH55 119 aa3.63□□□□□ -1.83
TRAPPC9-212ENST00000521944 UQCC3Q6UW78 93 aa3.63□□□□□ -1.83
TRAPPC9-212ENST00000521944 SCGB1D4Q6XE38 83 aa3.63□□□□□ -1.83
TRAPPC9-212ENST00000521944 COPS9Q8WXC6 57 aa3.63□□□□□ -1.83
TRAPPC9-212ENST00000521944 TRBV7-4A0A0J9YYF1 115 aa3.62□□□□□ -1.83
TRAPPC9-212ENST00000521944 SYS1-DBNDD2H3BUS1 97 aa3.6□□□□□ -1.83
TRAPPC9-212ENST00000521944 CLLU1Q5K131 121 aa3.6□□□□□ -1.83
TRAPPC9-212ENST00000521944 PRO2289Q9P1D8 64 aa3.6□□□□□ -1.83
TRAPPC9-212ENST00000521944 LINC01545Q5VT33 79 aa3.59□□□□□ -1.83
TRAPPC9-212ENST00000521944 C12orf57Q99622 126 aa3.58□□□□□ -1.84
TRAPPC9-212ENST00000521944 TRGC2P03986 189 aa3.57□□□□□ -1.84
TRAPPC9-212ENST00000521944 MT4P47944 62 aa3.57□□□□□ -1.84
TRAPPC9-212ENST00000521944 LYRM7Q5U5X0 104 aa3.57□□□□□ -1.84
TRAPPC9-212ENST00000521944 BVES-AS1Q5T3Y7 98 aa3.56□□□□□ -1.84
TRAPPC9-212ENST00000521944 CSAG1Q6PB30 78 aa3.56□□□□□ -1.84
TRAPPC9-212ENST00000521944 A8MU10 97 aa3.55□□□□□ -1.84
TRAPPC9-212ENST00000521944 C4orf26Q17RF5 130 aa3.55□□□□□ -1.84
TRAPPC9-212ENST00000521944 ANKRD29Q8N6D5 301 aa3.55□□□□□ -1.84
TRAPPC9-212ENST00000521944 DSCR8Q96T75 97 aa3.55□□□□□ -1.84
TRAPPC9-212ENST00000521944 LCA10Q71F78 164 aa3.54□□□□□ -1.84
TRAPPC9-212ENST00000521944 FABP2P12104 132 aa3.53□□□□□ -1.84
TRAPPC9-212ENST00000521944 RBM3P98179 157 aaKnown RBP3.53□□□□□ -1.84
TRAPPC9-212ENST00000521944 OCR1Q9BZK8 76 aa3.53□□□□□ -1.84
TRAPPC9-212ENST00000521944 C8orf17Q9NRJ1 99 aa3.53□□□□□ -1.84
TRAPPC9-212ENST00000521944 CRIPTQ9P021 101 aa3.53□□□□□ -1.84
TRAPPC9-212ENST00000521944 SPRR5A0A1B0GTR4 108 aa3.52□□□□□ -1.85
TRAPPC9-212ENST00000521944 A0A1B0GV72 72 aa3.52□□□□□ -1.85
TRAPPC9-212ENST00000521944 KRTAP5-1Q6L8H4 278 aa3.52□□□□□ -1.85
TRAPPC9-212ENST00000521944 PRR15Q8IV56 129 aa3.52□□□□□ -1.85
TRAPPC9-212ENST00000521944 CCKP06307 115 aa3.51□□□□□ -1.85
TRAPPC9-212ENST00000521944 PET117Q6UWS5 81 aa3.51□□□□□ -1.85
TRAPPC9-212ENST00000521944 S4R3F8 94 aa3.51□□□□□ -1.85
TRAPPC9-212ENST00000521944 TRACP01848 142 aa3.5□□□□□ -1.85
TRAPPC9-212ENST00000521944 Q5W150 140 aa3.5□□□□□ -1.85
TRAPPC9-212ENST00000521944 Q6ZVQ6 151 aa3.5□□□□□ -1.85
TRAPPC9-212ENST00000521944 APOC3P02656 99 aa3.48□□□□□ -1.85
TRAPPC9-212ENST00000521944 C2orf91Q6ZV80 131 aa3.48□□□□□ -1.85
TRAPPC9-212ENST00000521944 J3KT08 172 aa3.47□□□□□ -1.85
TRAPPC9-212ENST00000521944 C7orf65Q6ZTY9 151 aa3.46□□□□□ -1.86
TRAPPC9-212ENST00000521944 ATOH7Q8N100 152 aa3.46□□□□□ -1.86
TRAPPC9-212ENST00000521944 H0YGX0 51 aa3.45□□□□□ -1.86
TRAPPC9-212ENST00000521944 NDUFB1O75438 58 aa3.44□□□□□ -1.86
TRAPPC9-212ENST00000521944 SNAPINO95295 136 aa3.44□□□□□ -1.86
TRAPPC9-212ENST00000521944 SNCGO76070 127 aa3.43□□□□□ -1.86
TRAPPC9-212ENST00000521944 SVBPQ8N300 66 aa3.42□□□□□ -1.86
TRAPPC9-212ENST00000521944 MRPL34Q9BQ48 92 aaKnown RBP3.42□□□□□ -1.86
TRAPPC9-212ENST00000521944 MMP24-AS1A0A0U1RRL7 71 aa3.41□□□□□ -1.86
TRAPPC9-212ENST00000521944 A0A1B0GX51 115 aa3.41□□□□□ -1.86
TRAPPC9-212ENST00000521944 KRTAP5-4Q6L8H1 288 aa3.41□□□□□ -1.86
TRAPPC9-212ENST00000521944 Q6ZQT0 140 aa3.41□□□□□ -1.86
TRAPPC9-212ENST00000521944 PLAC4Q8WY50 150 aa3.41□□□□□ -1.86
TRAPPC9-212ENST00000521944 VPS25Q9BRG1 176 aa3.41□□□□□ -1.86
TRAPPC9-212ENST00000521944 TMEM254Q8TBM7 123 aa3.4□□□□□ -1.87
TRAPPC9-212ENST00000521944 KRTDAPP60985 99 aa3.39□□□□□ -1.87
TRAPPC9-212ENST00000521944 LCE3EQ5T5B0 92 aa3.38□□□□□ -1.87
TRAPPC9-212ENST00000521944 KRTAP19-3Q7Z4W3 81 aa3.38□□□□□ -1.87
TRAPPC9-212ENST00000521944 C1orf64Q8NEQ6 169 aa3.38□□□□□ -1.87
TRAPPC9-212ENST00000521944 A0A087WVE0 104 aa3.37□□□□□ -1.87
TRAPPC9-212ENST00000521944 K7EQZ3 153 aa3.37□□□□□ -1.87
TRAPPC9-212ENST00000521944 A8MUN3 132 aa3.36□□□□□ -1.87
TRAPPC9-212ENST00000521944 NDUFS5O43920 106 aa3.36□□□□□ -1.87
TRAPPC9-212ENST00000521944 HIST1H2BKO60814 126 aa3.36□□□□□ -1.87
TRAPPC9-212ENST00000521944 HIST1H2BJP06899 126 aa3.36□□□□□ -1.87
TRAPPC9-212ENST00000521944 HIST1H2BOP23527 126 aa3.36□□□□□ -1.87
TRAPPC9-212ENST00000521944 HIST1H2BBP33778 126 aa3.36□□□□□ -1.87
TRAPPC9-212ENST00000521944 HIST1H2BDP58876 126 aa3.36□□□□□ -1.87
TRAPPC9-212ENST00000521944 HIST1H2BCP62807 126 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 165.9 ms