RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 C9orf153Q5TBE3 101 aa1.75□□□□□ -2.13
VPS13B-209ENST00000521559 NAA38Q9BRA0 125 aaKnown RBP1.75□□□□□ -2.13
VPS13B-209ENST00000521559 ORMDL1Q9P0S3 153 aa1.75□□□□□ -2.13
VPS13B-209ENST00000521559 FRAS1Q86XX4 4008 aa1.75□□□□□ -2.13
VPS13B-209ENST00000521559 LRP1BQ9NZR2 4599 aa1.75□□□□□ -2.13
VPS13B-209ENST00000521559 TCL1BO95988 128 aa1.74□□□□□ -2.13
VPS13B-209ENST00000521559 SPINK1P00995 79 aa1.74□□□□□ -2.13
VPS13B-209ENST00000521559 RPS29P62273 56 aaKnown RBP1.74□□□□□ -2.13
VPS13B-209ENST00000521559 CD164Q04900 197 aa1.74□□□□□ -2.13
VPS13B-209ENST00000521559 Q6JHZ5 121 aa1.74□□□□□ -2.13
VPS13B-209ENST00000521559 DYNC1H1Q14204 4646 aaKnown RBP1.74□□□□□ -2.13
VPS13B-209ENST00000521559 FLG2Q5D862 2391 aaPredicted RBP1.74□□□□□ -2.13
VPS13B-209ENST00000521559 PKHD1P08F94 4074 aa1.74□□□□□ -2.13
VPS13B-209ENST00000521559 A0A0G2JQZ4 141 aa1.73□□□□□ -2.13
VPS13B-209ENST00000521559 A0A0U1RQV1 116 aa1.73□□□□□ -2.13
VPS13B-209ENST00000521559 C9JAW5 83 aa1.73□□□□□ -2.13
VPS13B-209ENST00000521559 H3BMG7 143 aa1.73□□□□□ -2.13
VPS13B-209ENST00000521559 IGFL1Q6UW32 110 aa1.73□□□□□ -2.13
VPS13B-209ENST00000521559 SPCS1Q9Y6A9 102 aa1.73□□□□□ -2.13
VPS13B-209ENST00000521559 BIRC6Q9NR09 4857 aa1.73□□□□□ -2.13
VPS13B-209ENST00000521559 DNAH5Q8TE73 4624 aa1.72□□□□□ -2.13
VPS13B-209ENST00000521559 SMIM26A0A096LP01 95 aa1.72□□□□□ -2.13
VPS13B-209ENST00000521559 TRBV7-7A0A0K0K1E9 115 aa1.72□□□□□ -2.13
VPS13B-209ENST00000521559 RBM3P98179 157 aaKnown RBP1.72□□□□□ -2.13
VPS13B-209ENST00000521559 Q5XG85 94 aa1.72□□□□□ -2.13
VPS13B-209ENST00000521559 HRCT1Q6UXD1 115 aa1.72□□□□□ -2.13
VPS13B-209ENST00000521559 ANKRD29Q8N6D5 301 aa1.72□□□□□ -2.13
VPS13B-209ENST00000521559 HSPG2P98160 4391 aa1.72□□□□□ -2.13
VPS13B-209ENST00000521559 EPPK1P58107 5090 aaKnown RBP1.72□□□□□ -2.13
VPS13B-209ENST00000521559 APOBP04114 4563 aaKnown RBP1.71□□□□□ -2.14
VPS13B-209ENST00000521559 TRBV7-4A0A0J9YYF1 115 aa1.71□□□□□ -2.14
VPS13B-209ENST00000521559 A0A1W2PNM2 257 aa1.71□□□□□ -2.14
VPS13B-209ENST00000521559 JMJD7-PLA2G4BH0Y9G9 81 aa1.71□□□□□ -2.14
VPS13B-209ENST00000521559 H3BT86 120 aa1.71□□□□□ -2.14
VPS13B-209ENST00000521559 K7EP34 96 aa1.71□□□□□ -2.14
VPS13B-209ENST00000521559 BPY2O14599 106 aa1.71□□□□□ -2.14
VPS13B-209ENST00000521559 Q5W150 140 aa1.71□□□□□ -2.14
VPS13B-209ENST00000521559 Q6Q795 121 aa1.71□□□□□ -2.14
VPS13B-209ENST00000521559 GTF2H5Q6ZYL4 71 aa1.71□□□□□ -2.14
VPS13B-209ENST00000521559 FP248Q71RG6 208 aaPredicted RBP1.71□□□□□ -2.14
VPS13B-209ENST00000521559 TEN1Q86WV5 123 aa1.71□□□□□ -2.14
VPS13B-209ENST00000521559 OBSCN-AS1Q96MR7 158 aa1.71□□□□□ -2.14
VPS13B-209ENST00000521559 DSCR8Q96T75 97 aa1.71□□□□□ -2.14
VPS13B-209ENST00000521559 LIMD2Q9BT23 127 aa1.71□□□□□ -2.14
VPS13B-209ENST00000521559 SRRM2Q9UQ35 2752 aaKnown RBP1.71□□□□□ -2.14
VPS13B-209ENST00000521559 KIAA1109Q2LD37 5005 aa1.71□□□□□ -2.14
VPS13B-209ENST00000521559 LOC110117498A0A087WWA1 95 aa1.7□□□□□ -2.14
VPS13B-209ENST00000521559 A0A1B0GV72 72 aa1.7□□□□□ -2.14
VPS13B-209ENST00000521559 CCKP06307 115 aa1.7□□□□□ -2.14
VPS13B-209ENST00000521559 PDE6GP18545 87 aa1.7□□□□□ -2.14
VPS13B-209ENST00000521559 ASB16-AS1Q495Z4 193 aa1.7□□□□□ -2.14
VPS13B-209ENST00000521559 C1orf195Q5TG92 126 aa1.7□□□□□ -2.14
VPS13B-209ENST00000521559 RETNLBQ9BQ08 111 aa1.7□□□□□ -2.14
VPS13B-209ENST00000521559 HERC2O95714 4834 aa1.69□□□□□ -2.14
VPS13B-209ENST00000521559 DMBT1Q9UGM3 2413 aaPredicted RBP1.69□□□□□ -2.14
VPS13B-209ENST00000521559 A0A087WSZ3 146 aa1.69□□□□□ -2.14
VPS13B-209ENST00000521559 A0A1B0GW54 56 aa1.69□□□□□ -2.14
VPS13B-209ENST00000521559 F8W1H4 67 aa1.69□□□□□ -2.14
VPS13B-209ENST00000521559 Q6ZQT0 140 aa1.69□□□□□ -2.14
VPS13B-209ENST00000521559 C14orf132Q9NPU4 83 aa1.69□□□□□ -2.14
VPS13B-209ENST00000521559 SS18L2Q9UHA2 77 aa1.69□□□□□ -2.14
VPS13B-209ENST00000521559 FAT1Q14517 4588 aa1.69□□□□□ -2.14
VPS13B-209ENST00000521559 DNAH8Q96JB1 4490 aa1.69□□□□□ -2.14
VPS13B-209ENST00000521559 A0A1B0GV90 55 aa1.68□□□□□ -2.14
VPS13B-209ENST00000521559 TPRXLQ17RH7 258 aa1.68□□□□□ -2.14
VPS13B-209ENST00000521559 VPS25Q9BRG1 176 aa1.68□□□□□ -2.14
VPS13B-209ENST00000521559 LINC00472Q9H8W2 130 aa1.68□□□□□ -2.14
VPS13B-209ENST00000521559 C8orf17Q9NRJ1 99 aa1.68□□□□□ -2.14
VPS13B-209ENST00000521559 RYR1P21817 5038 aa1.68□□□□□ -2.14
VPS13B-209ENST00000521559 Q96NJ1 140 aa1.67□□□□□ -2.14
VPS13B-209ENST00000521559 J3KT08 172 aa1.66□□□□□ -2.14
VPS13B-209ENST00000521559 IGKV4-1P06312 121 aa1.66□□□□□ -2.14
VPS13B-209ENST00000521559 NREPQ16612 68 aa1.66□□□□□ -2.14
VPS13B-209ENST00000521559 ETDBQ3ZM63 59 aa1.66□□□□□ -2.14
VPS13B-209ENST00000521559 VPS13BQ7Z7G8 4022 aa1.66□□□□□ -2.14
VPS13B-209ENST00000521559 KRTAP5-7Q6L8G8 165 aa1.65□□□□□ -2.15
VPS13B-209ENST00000521559 SIGMAR1Q99720 223 aa1.65□□□□□ -2.15
VPS13B-209ENST00000521559 C9orf92A6NGG3 77 aa1.64□□□□□ -2.15
VPS13B-209ENST00000521559 A8MWP4 228 aa1.64□□□□□ -2.15
VPS13B-209ENST00000521559 C8orf87E5RJ46 101 aa1.64□□□□□ -2.15
VPS13B-209ENST00000521559 NDUFB1O75438 58 aa1.64□□□□□ -2.15
VPS13B-209ENST00000521559 ACYP1P07311 99 aa1.64□□□□□ -2.15
VPS13B-209ENST00000521559 LINC00313P59037 77 aa1.64□□□□□ -2.15
VPS13B-209ENST00000521559 LINC00846Q9NV44 126 aa1.64□□□□□ -2.15
VPS13B-209ENST00000521559 LRP1Q07954 4544 aaKnown RBP1.63□□□□□ -2.15
VPS13B-209ENST00000521559 IGHV6-1A0A0B4J1U7 121 aa1.63□□□□□ -2.15
VPS13B-209ENST00000521559 IGKV3D-7A0A0C4DH55 119 aa1.63□□□□□ -2.15
VPS13B-209ENST00000521559 PSPHP1O15172 72 aa1.63□□□□□ -2.15
VPS13B-209ENST00000521559 PRR15Q8IV56 129 aa1.63□□□□□ -2.15
VPS13B-209ENST00000521559 UBL5Q9BZL1 73 aa1.63□□□□□ -2.15
VPS13B-209ENST00000521559 MYCBP2O75592 4640 aa1.62□□□□□ -2.15
VPS13B-209ENST00000521559 FAM240AA0A1B0GVK7 77 aa1.62□□□□□ -2.15
VPS13B-209ENST00000521559 A8MUU9 505 aa1.62□□□□□ -2.15
VPS13B-209ENST00000521559 RPL37P61927 97 aaKnown RBP1.62□□□□□ -2.15
VPS13B-209ENST00000521559 PCOTHQ58A44 107 aa1.62□□□□□ -2.15
VPS13B-209ENST00000521559 C20orf166-AS1Q96NR2 134 aa1.62□□□□□ -2.15
VPS13B-209ENST00000521559 HMCN1Q96RW7 5635 aa1.61□□□□□ -2.15
VPS13B-209ENST00000521559 J3QR89 54 aa1.61□□□□□ -2.15
VPS13B-209ENST00000521559 K7EQZ3 153 aa1.61□□□□□ -2.15
VPS13B-209ENST00000521559 LUZP6Q538Z0 58 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms