RNA–Protein interactions for RNA: ENST00000521189.1

CLVS1-207, Transcript of clavesin 1, humanhuman

TSL 2

Gene CLVS1, Length 2,532 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLVS1-207ENST00000521189 SPG11Q96JI7 2443 aa3.45□□□□□ -1.86
CLVS1-207ENST00000521189 HECTD1Q9ULT8 2610 aa3.44□□□□□ -1.86
CLVS1-207ENST00000521189 BOD1L1Q8NFC6 3051 aa3.43□□□□□ -1.86
CLVS1-207ENST00000521189 TENM4Q6N022 2769 aa3.43□□□□□ -1.86
CLVS1-207ENST00000521189 A0A0D9SG42 100 aa3.43□□□□□ -1.86
CLVS1-207ENST00000521189 KRTAP10-6P60371 365 aaPredicted RBP3.43□□□□□ -1.86
CLVS1-207ENST00000521189 SPRR5A0A1B0GTR4 108 aa3.42□□□□□ -1.86
CLVS1-207ENST00000521189 MYO9AB2RTY4 2548 aa3.42□□□□□ -1.86
CLVS1-207ENST00000521189 CSPG4Q6UVK1 2322 aa3.41□□□□□ -1.86
CLVS1-207ENST00000521189 ANKHD1Q8IWZ3 2542 aaKnown RBP3.41□□□□□ -1.86
CLVS1-207ENST00000521189 FREM2Q5SZK8 3169 aa3.4□□□□□ -1.86
CLVS1-207ENST00000521189 CELSR3Q9NYQ7 3312 aa3.4□□□□□ -1.86
CLVS1-207ENST00000521189 J3QKU1 62 aa3.4□□□□□ -1.86
CLVS1-207ENST00000521189 ABCA12Q86UK0 2595 aa3.4□□□□□ -1.86
CLVS1-207ENST00000521189 UBR5O95071 2799 aaPredicted RBP3.4□□□□□ -1.86
CLVS1-207ENST00000521189 KRTAP10-8P60410 259 aa3.4□□□□□ -1.87
CLVS1-207ENST00000521189 KRTAP13-4Q3LI77 160 aa3.39□□□□□ -1.87
CLVS1-207ENST00000521189 TEX15Q9BXT5 2789 aa3.39□□□□□ -1.87
CLVS1-207ENST00000521189 SPTAN1Q13813 2472 aaKnown RBP3.39□□□□□ -1.87
CLVS1-207ENST00000521189 KRTAP12-1P59990 96 aa3.39□□□□□ -1.87
CLVS1-207ENST00000521189 LCE5AQ5TCM9 118 aa3.39□□□□□ -1.87
CLVS1-207ENST00000521189 DEFB135Q30KP9 77 aa3.38□□□□□ -1.87
CLVS1-207ENST00000521189 NBASA2RRP1 2371 aa3.37□□□□□ -1.87
CLVS1-207ENST00000521189 ITPR3Q14573 2671 aa3.36□□□□□ -1.87
CLVS1-207ENST00000521189 COL12A1Q99715 3063 aa3.36□□□□□ -1.87
CLVS1-207ENST00000521189 DEFB4AO15263 64 aa3.36□□□□□ -1.87
CLVS1-207ENST00000521189 FBN2P35556 2912 aa3.36□□□□□ -1.87
CLVS1-207ENST00000521189 CFAP46Q8IYW2 2715 aa3.36□□□□□ -1.87
CLVS1-207ENST00000521189 M0QZ58 72 aa3.35□□□□□ -1.87
CLVS1-207ENST00000521189 LRBAP50851 2863 aa3.35□□□□□ -1.87
CLVS1-207ENST00000521189 LAMA1P25391 3075 aa3.35□□□□□ -1.87
CLVS1-207ENST00000521189 RELNP78509 3460 aa3.35□□□□□ -1.87
CLVS1-207ENST00000521189 NBPF19A0A087WUL8 3843 aa3.35□□□□□ -1.87
CLVS1-207ENST00000521189 FN1P02751 2386 aaKnown RBP3.35□□□□□ -1.87
CLVS1-207ENST00000521189 ABCA2Q9BZC7 2435 aa3.35□□□□□ -1.87
CLVS1-207ENST00000521189 PRRC2CQ9Y520 2896 aaKnown RBP3.35□□□□□ -1.87
CLVS1-207ENST00000521189 AKAP9Q99996 3911 aa3.34□□□□□ -1.87
CLVS1-207ENST00000521189 NOTCH2Q04721 2471 aa3.33□□□□□ -1.88
CLVS1-207ENST00000521189 TACC2O95359 2948 aa3.33□□□□□ -1.88
CLVS1-207ENST00000521189 SPENQ96T58 3664 aaKnown RBP3.31□□□□□ -1.88
CLVS1-207ENST00000521189 LCE1DQ5T752 114 aa3.3□□□□□ -1.88
CLVS1-207ENST00000521189 DNHD1Q96M86 4753 aa3.3□□□□□ -1.88
CLVS1-207ENST00000521189 F8P00451 2351 aa3.3□□□□□ -1.88
CLVS1-207ENST00000521189 CSMD1Q96PZ7 3565 aa3.29□□□□□ -1.88
CLVS1-207ENST00000521189 CRYBG3Q68DQ2 2970 aa3.29□□□□□ -1.88
CLVS1-207ENST00000521189 ATMQ13315 3056 aa3.29□□□□□ -1.88
CLVS1-207ENST00000521189 Q5VSD8 79 aa3.28□□□□□ -1.88
CLVS1-207ENST00000521189 HIVEP3Q5T1R4 2406 aa3.28□□□□□ -1.88
CLVS1-207ENST00000521189 NF1P21359 2839 aa3.27□□□□□ -1.89
CLVS1-207ENST00000521189 TLN1Q9Y490 2541 aaKnown RBP3.27□□□□□ -1.89
CLVS1-207ENST00000521189 CCDC168Q8NDH2 2452 aa3.26□□□□□ -1.89
CLVS1-207ENST00000521189 POLQO75417 2590 aa3.26□□□□□ -1.89
CLVS1-207ENST00000521189 KRTAP4-8A0A0G2JLE6 195 aa3.26□□□□□ -1.89
CLVS1-207ENST00000521189 VWFP04275 2813 aa3.26□□□□□ -1.89
CLVS1-207ENST00000521189 FBN1P35555 2871 aaKnown RBP3.25□□□□□ -1.89
CLVS1-207ENST00000521189 APCP25054 2843 aa3.25□□□□□ -1.89
CLVS1-207ENST00000521189 USP9YO00507 2555 aaPredicted RBP3.24□□□□□ -1.89
CLVS1-207ENST00000521189 SETD2Q9BYW2 2564 aaPredicted RBP3.24□□□□□ -1.89
CLVS1-207ENST00000521189 ITPR2Q14571 2701 aa3.24□□□□□ -1.89
CLVS1-207ENST00000521189 LRRK2Q5S007 2527 aa3.24□□□□□ -1.89
CLVS1-207ENST00000521189 FLNCQ14315 2725 aa3.23□□□□□ -1.89
CLVS1-207ENST00000521189 SONP18583 2426 aaKnown RBP3.23□□□□□ -1.89
CLVS1-207ENST00000521189 BSNQ9UPA5 3926 aa3.22□□□□□ -1.89
CLVS1-207ENST00000521189 SRRM2Q9UQ35 2752 aaKnown RBP3.21□□□□□ -1.9
CLVS1-207ENST00000521189 TLN2Q9Y4G6 2542 aa3.21□□□□□ -1.9
CLVS1-207ENST00000521189 VPS13DQ5THJ4 4388 aa3.2□□□□□ -1.9
CLVS1-207ENST00000521189 COL6A5A8TX70 2615 aa3.2□□□□□ -1.9
CLVS1-207ENST00000521189 UTP20O75691 2785 aaKnown RBP3.2□□□□□ -1.9
CLVS1-207ENST00000521189 RPS29P62273 56 aaKnown RBP3.2□□□□□ -1.9
CLVS1-207ENST00000521189 CELSR1Q9NYQ6 3014 aa3.19□□□□□ -1.9
CLVS1-207ENST00000521189 JMJD1CQ15652 2540 aa3.17□□□□□ -1.9
CLVS1-207ENST00000521189 ADGRG4Q8IZF6 3080 aa3.17□□□□□ -1.9
CLVS1-207ENST00000521189 MEGF8Q7Z7M0 2845 aa3.17□□□□□ -1.9
CLVS1-207ENST00000521189 CENPEQ02224 2701 aa3.16□□□□□ -1.9
CLVS1-207ENST00000521189 A0A1B0GVY2 172 aa3.16□□□□□ -1.9
CLVS1-207ENST00000521189 MTORP42345 2549 aa3.16□□□□□ -1.9
CLVS1-207ENST00000521189 MAPK1IP1LQ8NDC0 245 aa3.15□□□□□ -1.91
CLVS1-207ENST00000521189 HIVEP1P15822 2718 aa3.15□□□□□ -1.91
CLVS1-207ENST00000521189 PDZD2O15018 2839 aa3.14□□□□□ -1.91
CLVS1-207ENST00000521189 KRTAP4-9Q9BYQ8 210 aa3.13□□□□□ -1.91
CLVS1-207ENST00000521189 CSMD2Q7Z408 3487 aa3.12□□□□□ -1.91
CLVS1-207ENST00000521189 KRTAP4-11Q9BYQ6 195 aa3.11□□□□□ -1.91
CLVS1-207ENST00000521189 KRTAP4-7Q9BYR0 210 aa3.11□□□□□ -1.91
CLVS1-207ENST00000521189 DCHS2Q6V1P9 2916 aa3.11□□□□□ -1.91
CLVS1-207ENST00000521189 NIPBLQ6KC79 2804 aaeCLIP3.1□□□□□ -1.91
CLVS1-207ENST00000521189 HRNRQ86YZ3 2850 aaPredicted RBP3.1□□□□□ -1.91
CLVS1-207ENST00000521189 KRTAP17-1Q9BYP8 105 aa3.1□□□□□ -1.91
CLVS1-207ENST00000521189 DMBT1Q9UGM3 2413 aaPredicted RBP3.09□□□□□ -1.91
CLVS1-207ENST00000521189 DNAH1Q9P2D7 4330 aa3.08□□□□□ -1.92
CLVS1-207ENST00000521189 NBEAL1Q6ZS30 2694 aa3.08□□□□□ -1.92
CLVS1-207ENST00000521189 KRTAP13-2Q52LG2 175 aa3.08□□□□□ -1.92
CLVS1-207ENST00000521189 LCE1AQ5T7P2 110 aa3.08□□□□□ -1.92
CLVS1-207ENST00000521189 KRTAP10-11P60412 298 aa3.07□□□□□ -1.92
CLVS1-207ENST00000521189 ATRQ13535 2644 aa3.05□□□□□ -1.92
CLVS1-207ENST00000521189 ZNF469Q96JG9 3925 aaPredicted RBP3.05□□□□□ -1.92
CLVS1-207ENST00000521189 KRTAP1-5Q9BYS1 174 aa3.02□□□□□ -1.93
CLVS1-207ENST00000521189 STAB1Q9NY15 2570 aa3.02□□□□□ -1.93
CLVS1-207ENST00000521189 DNAH11Q96DT5 4516 aa3.01□□□□□ -1.93
CLVS1-207ENST00000521189 NBEAL2Q6ZNJ1 2754 aa3.01□□□□□ -1.93
CLVS1-207ENST00000521189 ACANP16112 2415 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms