RNA–Protein interactions for RNA: ENST00000520991.3

CLN8-205, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5 BASIC

Gene CLN8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-205ENST00000520991 KRTAP9-8Q9BYQ0 159 aa7.97□□□□□ -1.13
CLN8-205ENST00000520991 A0A1B0GVX0 72 aa7.96□□□□□ -1.14
CLN8-205ENST00000520991 C8orf87E5RJ46 101 aa7.96□□□□□ -1.14
CLN8-205ENST00000520991 C9JAW5 83 aa7.93□□□□□ -1.14
CLN8-205ENST00000520991 BAALC-AS2P0C853 105 aa7.93□□□□□ -1.14
CLN8-205ENST00000520991 HRES1P13985 223 aa7.93□□□□□ -1.14
CLN8-205ENST00000520991 J3KT08 172 aa7.91□□□□□ -1.14
CLN8-205ENST00000520991 MPLKIPQ8TAP9 179 aa7.91□□□□□ -1.14
CLN8-205ENST00000520991 Q6ZQT0 140 aa7.88□□□□□ -1.15
CLN8-205ENST00000520991 NDUFB1O75438 58 aa7.87□□□□□ -1.15
CLN8-205ENST00000520991 ZCCHC13Q8WW36 166 aaKnown RBP7.87□□□□□ -1.15
CLN8-205ENST00000520991 ATXN8Q156A1 80 aa7.86□□□□□ -1.15
CLN8-205ENST00000520991 MTURNQ8N3F0 131 aa7.86□□□□□ -1.15
CLN8-205ENST00000520991 MT2AP02795 61 aa7.85□□□□□ -1.15
CLN8-205ENST00000520991 M0R143 59 aa7.84□□□□□ -1.15
CLN8-205ENST00000520991 JMJD7-PLA2G4BH0Y9G9 81 aa7.83□□□□□ -1.16
CLN8-205ENST00000520991 NAA38Q9BRA0 125 aaKnown RBP7.83□□□□□ -1.16
CLN8-205ENST00000520991 USH2AO75445 5202 aa7.83□□□□□ -1.16
CLN8-205ENST00000520991 SPINK7P58062 85 aa7.82□□□□□ -1.16
CLN8-205ENST00000520991 LOC110117498A0A087WWA1 95 aa7.8□□□□□ -1.16
CLN8-205ENST00000520991 A0A1B0GW54 56 aa7.8□□□□□ -1.16
CLN8-205ENST00000520991 LYRM7Q5U5X0 104 aa7.8□□□□□ -1.16
CLN8-205ENST00000520991 A8MWP4 228 aa7.79□□□□□ -1.16
CLN8-205ENST00000520991 MT1FP04733 61 aa7.79□□□□□ -1.16
CLN8-205ENST00000520991 Q8N9P0 234 aaPredicted RBP7.79□□□□□ -1.16
CLN8-205ENST00000520991 C8orf17Q9NRJ1 99 aa7.79□□□□□ -1.16
CLN8-205ENST00000520991 PDE6GP18545 87 aa7.78□□□□□ -1.16
CLN8-205ENST00000520991 KRTAP10-10P60014 251 aa7.78□□□□□ -1.16
CLN8-205ENST00000520991 SSPOA2VEC9 5147 aa7.78□□□□□ -1.16
CLN8-205ENST00000520991 C14orf132Q9NPU4 83 aa7.78□□□□□ -1.16
CLN8-205ENST00000520991 IGKV3D-7A0A0C4DH55 119 aa7.76□□□□□ -1.17
CLN8-205ENST00000520991 Q6ZVQ6 151 aa7.74□□□□□ -1.17
CLN8-205ENST00000520991 WFDC13Q8IUB5 93 aa7.74□□□□□ -1.17
CLN8-205ENST00000520991 NREPQ16612 68 aa7.73□□□□□ -1.17
CLN8-205ENST00000520991 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.72□□□□□ -1.17
CLN8-205ENST00000520991 KRTAP9-3Q9BYQ3 159 aa7.72□□□□□ -1.17
CLN8-205ENST00000520991 PRR15Q8IV56 129 aa7.71□□□□□ -1.18
CLN8-205ENST00000520991 SMIM6P0DI80 62 aa7.69□□□□□ -1.18
CLN8-205ENST00000520991 BATFQ16520 125 aa7.68□□□□□ -1.18
CLN8-205ENST00000520991 KRTAP9-7A8MTY7 169 aa7.66□□□□□ -1.18
CLN8-205ENST00000520991 TMEM254Q8TBM7 123 aa7.66□□□□□ -1.18
CLN8-205ENST00000520991 MRPL34Q9BQ48 92 aaKnown RBP7.66□□□□□ -1.18
CLN8-205ENST00000520991 MMP24-AS1A0A0U1RRL7 71 aa7.65□□□□□ -1.18
CLN8-205ENST00000520991 KRTAP19-1Q8IUB9 90 aa7.65□□□□□ -1.18
CLN8-205ENST00000520991 TSTD3H0UI37 97 aa7.64□□□□□ -1.19
CLN8-205ENST00000520991 FCGBPQ9Y6R7 5405 aaPredicted RBP7.64□□□□□ -1.19
CLN8-205ENST00000520991 NDUFS5O43920 106 aa7.63□□□□□ -1.19
CLN8-205ENST00000520991 hDV103S1A0JD37 113 aa7.62□□□□□ -1.19
CLN8-205ENST00000520991 LOC105371267A0A1B0GV96 52 aa7.61□□□□□ -1.19
CLN8-205ENST00000520991 H3BT86 120 aa7.61□□□□□ -1.19
CLN8-205ENST00000520991 K7EQZ3 153 aa7.61□□□□□ -1.19
CLN8-205ENST00000520991 C9orf118A6NHY6 69 aa7.58□□□□□ -1.2
CLN8-205ENST00000520991 BPY2O14599 106 aa7.57□□□□□ -1.2
CLN8-205ENST00000520991 A0A1W2PPM0 123 aa7.56□□□□□ -1.2
CLN8-205ENST00000520991 H1FX-AS1Q4G0G2 97 aa7.55□□□□□ -1.2
CLN8-205ENST00000520991 IGKV2D-30A0A075B6S6 120 aa7.54□□□□□ -1.2
CLN8-205ENST00000520991 IGKV2-30P06310 120 aa7.54□□□□□ -1.2
CLN8-205ENST00000520991 TAX1BP3O14907 124 aa7.53□□□□□ -1.2
CLN8-205ENST00000520991 LINC00846Q9NV44 126 aa7.53□□□□□ -1.2
CLN8-205ENST00000520991 C7orf65Q6ZTY9 151 aa7.52□□□□□ -1.21
CLN8-205ENST00000520991 Q5W150 140 aa7.5□□□□□ -1.21
CLN8-205ENST00000520991 CASC2Q6XLA1 102 aa7.49□□□□□ -1.21
CLN8-205ENST00000520991 Q8N9L7 120 aa7.49□□□□□ -1.21
CLN8-205ENST00000520991 HCG22E2RYF7 251 aa7.47□□□□□ -1.21
CLN8-205ENST00000520991 KRTAP19-6Q3LI70 58 aa7.47□□□□□ -1.21
CLN8-205ENST00000520991 SPCS1Q9Y6A9 102 aa7.46□□□□□ -1.22
CLN8-205ENST00000520991 MACF1Q9UPN3 7388 aaKnown RBP7.43□□□□□ -1.22
CLN8-205ENST00000520991 CXCL6P80162 114 aa7.42□□□□□ -1.22
CLN8-205ENST00000520991 C4orf26Q17RF5 130 aa7.41□□□□□ -1.22
CLN8-205ENST00000520991 SMCPP49901 116 aaPredicted RBP7.39□□□□□ -1.23
CLN8-205ENST00000520991 UBL5Q9BZL1 73 aa7.39□□□□□ -1.23
CLN8-205ENST00000520991 SYNE2Q8WXH0 6885 aaKnown RBP7.38□□□□□ -1.23
CLN8-205ENST00000520991 COL5A1-AS1Q5SY13 56 aa7.32□□□□□ -1.24
CLN8-205ENST00000520991 C5orf47Q569G3 176 aa7.31□□□□□ -1.24
CLN8-205ENST00000520991 PRO0461Q9UI25 63 aa7.31□□□□□ -1.24
CLN8-205ENST00000520991 K7EP34 96 aa7.29□□□□□ -1.24
CLN8-205ENST00000520991 FAM236AA0A1B0GUQ0 79 aa7.28□□□□□ -1.24
CLN8-205ENST00000520991 FAM236BA0A1B0GV22 79 aa7.28□□□□□ -1.24
CLN8-205ENST00000520991 S4R3F8 94 aa7.28□□□□□ -1.24
CLN8-205ENST00000520991 C1orf64Q8NEQ6 169 aa7.27□□□□□ -1.25
CLN8-205ENST00000520991 KRTAP3-1Q9BYR8 98 aa7.26□□□□□ -1.25
CLN8-205ENST00000520991 TP53AIP1Q9HCN2 124 aa7.24□□□□□ -1.25
CLN8-205ENST00000520991 CSAG1Q6PB30 78 aa7.23□□□□□ -1.25
CLN8-205ENST00000520991 LCA10Q71F78 164 aa7.21□□□□□ -1.26
CLN8-205ENST00000520991 LOC100996750A0A140TA64 210 aa7.2□□□□□ -1.26
CLN8-205ENST00000520991 GTF2H5Q6ZYL4 71 aa7.2□□□□□ -1.26
CLN8-205ENST00000520991 KRTAP4-6Q9BYQ5 205 aa7.2□□□□□ -1.26
CLN8-205ENST00000520991 PCP4L1A6NKN8 68 aa7.17□□□□□ -1.26
CLN8-205ENST00000520991 KRTAP6-3Q3LI67 103 aa7.17□□□□□ -1.26
CLN8-205ENST00000520991 F8W1H4 67 aa7.15□□□□□ -1.26
CLN8-205ENST00000520991 ETDBQ3ZM63 59 aa7.15□□□□□ -1.26
CLN8-205ENST00000520991 Q5VV11 94 aa7.15□□□□□ -1.26
CLN8-205ENST00000520991 A6NN06 94 aa7.12□□□□□ -1.27
CLN8-205ENST00000520991 SPRR2GQ9BYE4 73 aa7.12□□□□□ -1.27
CLN8-205ENST00000520991 MT1BP07438 61 aa7.11□□□□□ -1.27
CLN8-205ENST00000520991 CYP4F30PQ9H0H9 118 aa7.1□□□□□ -1.27
CLN8-205ENST00000520991 KLKP1Q107X0 134 aa7.08□□□□□ -1.28
CLN8-205ENST00000520991 KRTAP19-8Q3LI54 63 aa7.08□□□□□ -1.28
CLN8-205ENST00000520991 TRAV22A0A0B4J277 110 aa7.07□□□□□ -1.28
CLN8-205ENST00000520991 LOC101927531A0A1B0GV80 90 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms