RNA–Protein interactions for RNA: ENST00000520889.1

IGHV4-55-201, Transcript of immunoglobulin heavy variable 4-55 (pseudogene), humanhuman

BASIC

Gene IGHV4-55, Length 368 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-55-201ENST00000520889 KRTAP4-8A0A0G2JLE6 195 aa3.54□□□□□ -1.84
IGHV4-55-201ENST00000520889 KRTAP13-3Q3SY46 172 aa3.54□□□□□ -1.84
IGHV4-55-201ENST00000520889 ETDBQ3ZM63 59 aa3.54□□□□□ -1.84
IGHV4-55-201ENST00000520889 FAM240AA0A1B0GVK7 77 aa3.52□□□□□ -1.85
IGHV4-55-201ENST00000520889 ACYP1P07311 99 aa3.52□□□□□ -1.85
IGHV4-55-201ENST00000520889 NREPQ16612 68 aa3.52□□□□□ -1.85
IGHV4-55-201ENST00000520889 IGKV4-1P06312 121 aa3.51□□□□□ -1.85
IGHV4-55-201ENST00000520889 CDIP1Q9H305 208 aa3.51□□□□□ -1.85
IGHV4-55-201ENST00000520889 C8orf87E5RJ46 101 aa3.5□□□□□ -1.85
IGHV4-55-201ENST00000520889 NDUFB1O75438 58 aa3.5□□□□□ -1.85
IGHV4-55-201ENST00000520889 UBL5Q9BZL1 73 aa3.5□□□□□ -1.85
IGHV4-55-201ENST00000520889 A8MWP4 228 aa3.49□□□□□ -1.85
IGHV4-55-201ENST00000520889 Q6ZVQ6 151 aa3.49□□□□□ -1.85
IGHV4-55-201ENST00000520889 SIGMAR1Q99720 223 aa3.49□□□□□ -1.85
IGHV4-55-201ENST00000520889 A0A1B0GVX0 72 aa3.48□□□□□ -1.85
IGHV4-55-201ENST00000520889 J3QR89 54 aa3.48□□□□□ -1.85
IGHV4-55-201ENST00000520889 LINC00846Q9NV44 126 aa3.48□□□□□ -1.85
IGHV4-55-201ENST00000520889 BPY2O14599 106 aa3.47□□□□□ -1.85
IGHV4-55-201ENST00000520889 LINC00313P59037 77 aa3.47□□□□□ -1.85
IGHV4-55-201ENST00000520889 KRTAP19-1Q8IUB9 90 aa3.47□□□□□ -1.85
IGHV4-55-201ENST00000520889 LRP2P98164 4655 aa3.46□□□□□ -1.85
IGHV4-55-201ENST00000520889 DSCR10P59022 87 aa3.46□□□□□ -1.86
IGHV4-55-201ENST00000520889 SEC61BP60468 96 aaKnown RBP3.46□□□□□ -1.86
IGHV4-55-201ENST00000520889 CXCL6P80162 114 aa3.46□□□□□ -1.86
IGHV4-55-201ENST00000520889 DEFB116Q30KQ4 102 aa3.46□□□□□ -1.86
IGHV4-55-201ENST00000520889 Q75L30 129 aa3.46□□□□□ -1.86
IGHV4-55-201ENST00000520889 PRR15Q8IV56 129 aa3.46□□□□□ -1.86
IGHV4-55-201ENST00000520889 IGKV3D-7A0A0C4DH55 119 aa3.45□□□□□ -1.86
IGHV4-55-201ENST00000520889 C9orf92A6NGG3 77 aa3.45□□□□□ -1.86
IGHV4-55-201ENST00000520889 RPL37P61927 97 aaKnown RBP3.45□□□□□ -1.86
IGHV4-55-201ENST00000520889 ATP5EP2Q5VTU8 51 aa3.45□□□□□ -1.86
IGHV4-55-201ENST00000520889 C20orf166-AS1Q96NR2 134 aa3.45□□□□□ -1.86
IGHV4-55-201ENST00000520889 LPAP08519 4548 aa3.44□□□□□ -1.86
IGHV4-55-201ENST00000520889 IGHV6-1A0A0B4J1U7 121 aa3.44□□□□□ -1.86
IGHV4-55-201ENST00000520889 A8MUU9 505 aa3.44□□□□□ -1.86
IGHV4-55-201ENST00000520889 KRTAP16-1A8MUX0 517 aa3.44□□□□□ -1.86
IGHV4-55-201ENST00000520889 Q8N9P0 234 aaPredicted RBP3.43□□□□□ -1.86
IGHV4-55-201ENST00000520889 C8orf17Q9NRJ1 99 aa3.43□□□□□ -1.86
IGHV4-55-201ENST00000520889 K7EQZ3 153 aa3.42□□□□□ -1.86
IGHV4-55-201ENST00000520889 NOTCH2NLQ7Z3S9 236 aa3.42□□□□□ -1.86
IGHV4-55-201ENST00000520889 LINC00643Q86TS7 51 aa3.42□□□□□ -1.86
IGHV4-55-201ENST00000520889 TMEM254Q8TBM7 123 aa3.42□□□□□ -1.86
IGHV4-55-201ENST00000520889 KRTAP4-7Q9BYR0 210 aa3.42□□□□□ -1.86
IGHV4-55-201ENST00000520889 UBR4Q5T4S7 5183 aa3.41□□□□□ -1.86
IGHV4-55-201ENST00000520889 MMP24-AS1A0A0U1RRL7 71 aa3.41□□□□□ -1.86
IGHV4-55-201ENST00000520889 K7ERU9 68 aa3.41□□□□□ -1.86
IGHV4-55-201ENST00000520889 ATP11AUNQ6ZP68 121 aa3.41□□□□□ -1.86
IGHV4-55-201ENST00000520889 MUC17Q685J3 4493 aa3.4□□□□□ -1.86
IGHV4-55-201ENST00000520889 hDV103S1A0JD37 113 aa3.4□□□□□ -1.87
IGHV4-55-201ENST00000520889 MRPL34Q9BQ48 92 aaKnown RBP3.4□□□□□ -1.87
IGHV4-55-201ENST00000520889 LCE1DQ5T752 114 aa3.39□□□□□ -1.87
IGHV4-55-201ENST00000520889 HCG22E2RYF7 251 aa3.38□□□□□ -1.87
IGHV4-55-201ENST00000520889 PCOTHQ58A44 107 aa3.38□□□□□ -1.87
IGHV4-55-201ENST00000520889 CASC2Q6XLA1 102 aa3.37□□□□□ -1.87
IGHV4-55-201ENST00000520889 Q8N9L7 120 aa3.36□□□□□ -1.87
IGHV4-55-201ENST00000520889 ZCCHC13Q8WW36 166 aaKnown RBP3.36□□□□□ -1.87
IGHV4-55-201ENST00000520889 IMUPQ9GZP8 106 aa3.36□□□□□ -1.87
IGHV4-55-201ENST00000520889 RNF213Q63HN8 5207 aa3.35□□□□□ -1.87
IGHV4-55-201ENST00000520889 WFDC13Q8IUB5 93 aa3.35□□□□□ -1.87
IGHV4-55-201ENST00000520889 TP53AIP1Q9HCN2 124 aa3.35□□□□□ -1.87
IGHV4-55-201ENST00000520889 A0A0U1RQV1 116 aa3.34□□□□□ -1.87
IGHV4-55-201ENST00000520889 HIST1H4AP62805 103 aaKnown RBP3.33□□□□□ -1.88
IGHV4-55-201ENST00000520889 NDUFS5O43920 106 aa3.32□□□□□ -1.88
IGHV4-55-201ENST00000520889 KRTAP4-1Q9BYQ7 146 aa3.32□□□□□ -1.88
IGHV4-55-201ENST00000520889 KRTAP4-9Q9BYQ8 210 aa3.31□□□□□ -1.88
IGHV4-55-201ENST00000520889 A0A087WVE0 104 aa3.29□□□□□ -1.88
IGHV4-55-201ENST00000520889 UQCRQO14949 82 aa3.29□□□□□ -1.88
IGHV4-55-201ENST00000520889 SPINK7P58062 85 aa3.28□□□□□ -1.88
IGHV4-55-201ENST00000520889 Q5W150 140 aa3.28□□□□□ -1.88
IGHV4-55-201ENST00000520889 KRTAP4-2Q9BYR5 136 aa3.28□□□□□ -1.88
IGHV4-55-201ENST00000520889 MUC2Q02817 5179 aa3.28□□□□□ -1.88
IGHV4-55-201ENST00000520889 ATOX1O00244 68 aa3.27□□□□□ -1.89
IGHV4-55-201ENST00000520889 MT-ATP8P03928 68 aa3.27□□□□□ -1.89
IGHV4-55-201ENST00000520889 C7orf65Q6ZTY9 151 aa3.27□□□□□ -1.89
IGHV4-55-201ENST00000520889 MPLKIPQ8TAP9 179 aa3.27□□□□□ -1.89
IGHV4-55-201ENST00000520889 TRAV22A0A0B4J277 110 aa3.26□□□□□ -1.89
IGHV4-55-201ENST00000520889 HRES1P13985 223 aa3.26□□□□□ -1.89
IGHV4-55-201ENST00000520889 KRTAP19-2Q3LHN2 52 aa3.26□□□□□ -1.89
IGHV4-55-201ENST00000520889 SMIM20Q8N5G0 67 aa3.26□□□□□ -1.89
IGHV4-55-201ENST00000520889 OCR1Q9BZK8 76 aa3.26□□□□□ -1.89
IGHV4-55-201ENST00000520889 RBM12B-AS1Q9P1G2 102 aa3.26□□□□□ -1.89
IGHV4-55-201ENST00000520889 IGKV2-30P06310 120 aa3.25□□□□□ -1.89
IGHV4-55-201ENST00000520889 C5orf47Q569G3 176 aa3.25□□□□□ -1.89
IGHV4-55-201ENST00000520889 LOC101927531A0A1B0GV80 90 aa3.24□□□□□ -1.89
IGHV4-55-201ENST00000520889 H3BPC8 53 aa3.24□□□□□ -1.89
IGHV4-55-201ENST00000520889 FAT4Q6V0I7 4981 aa3.23□□□□□ -1.89
IGHV4-55-201ENST00000520889 SCGB1A1P11684 91 aa3.23□□□□□ -1.89
IGHV4-55-201ENST00000520889 IGKV2D-30A0A075B6S6 120 aa3.22□□□□□ -1.89
IGHV4-55-201ENST00000520889 MP68P56378 58 aa3.22□□□□□ -1.89
IGHV4-55-201ENST00000520889 COX6B2Q6YFQ2 88 aa3.22□□□□□ -1.89
IGHV4-55-201ENST00000520889 FAM236AA0A1B0GUQ0 79 aa3.21□□□□□ -1.9
IGHV4-55-201ENST00000520889 FAM236BA0A1B0GV22 79 aa3.21□□□□□ -1.9
IGHV4-55-201ENST00000520889 H0Y9P7 68 aa3.21□□□□□ -1.9
IGHV4-55-201ENST00000520889 CYP4F30PQ9H0H9 118 aa3.21□□□□□ -1.9
IGHV4-55-201ENST00000520889 TRAV7A0A075B6U4 112 aa3.2□□□□□ -1.9
IGHV4-55-201ENST00000520889 C1orf64Q8NEQ6 169 aa3.19□□□□□ -1.9
IGHV4-55-201ENST00000520889 FAM236DA0A1B0GTK5 79 aa3.18□□□□□ -1.9
IGHV4-55-201ENST00000520889 FAM236CP0DP71 79 aa3.18□□□□□ -1.9
IGHV4-55-201ENST00000520889 MT1HP80294 61 aa3.18□□□□□ -1.9
IGHV4-55-201ENST00000520889 H1FX-AS1Q4G0G2 97 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms