RNA–Protein interactions for RNA: ENST00000520525.1

TRAPPC13-212, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-212ENST00000520525 LINC00472Q9H8W2 130 aa1.23□□□□□ -2.21
TRAPPC13-212ENST00000520525 C6orf48Q9UBA6 75 aa1.23□□□□□ -2.21
TRAPPC13-212ENST00000520525 MED13LQ71F56 2210 aa1.23□□□□□ -2.21
TRAPPC13-212ENST00000520525 CRYBG3Q68DQ2 2970 aa1.23□□□□□ -2.21
TRAPPC13-212ENST00000520525 NF1P21359 2839 aa1.22□□□□□ -2.21
TRAPPC13-212ENST00000520525 FRYQ5TBA9 3013 aa1.22□□□□□ -2.21
TRAPPC13-212ENST00000520525 GVQW2A0A096LPI5 108 aaPredicted RBP1.22□□□□□ -2.21
TRAPPC13-212ENST00000520525 MMP24-AS1A0A0U1RRL7 71 aa1.22□□□□□ -2.21
TRAPPC13-212ENST00000520525 RPL37AP61513 92 aaKnown RBP1.22□□□□□ -2.21
TRAPPC13-212ENST00000520525 KRTAP26-1Q6PEX3 210 aa1.22□□□□□ -2.21
TRAPPC13-212ENST00000520525 CLPSL2Q6UWE3 100 aa1.22□□□□□ -2.21
TRAPPC13-212ENST00000520525 UNQ6190/PRO20217Q6UXQ8 127 aa1.22□□□□□ -2.21
TRAPPC13-212ENST00000520525 U3KQA8 63 aa1.22□□□□□ -2.21
TRAPPC13-212ENST00000520525 PLCE1Q9P212 2302 aa1.22□□□□□ -2.21
TRAPPC13-212ENST00000520525 ITPR1Q14643 2758 aa1.21□□□□□ -2.22
TRAPPC13-212ENST00000520525 VPS13AQ96RL7 3174 aa1.21□□□□□ -2.22
TRAPPC13-212ENST00000520525 URB1O60287 2271 aaKnown RBP1.21□□□□□ -2.22
TRAPPC13-212ENST00000520525 A0A087WTM6 91 aa1.21□□□□□ -2.22
TRAPPC13-212ENST00000520525 J3QKU1 62 aa1.21□□□□□ -2.22
TRAPPC13-212ENST00000520525 DEFB131AP59861 70 aa1.21□□□□□ -2.22
TRAPPC13-212ENST00000520525 KRTAP12-1P59990 96 aa1.21□□□□□ -2.22
TRAPPC13-212ENST00000520525 CCL19Q99731 98 aa1.21□□□□□ -2.22
TRAPPC13-212ENST00000520525 SORL1Q92673 2214 aa1.21□□□□□ -2.22
TRAPPC13-212ENST00000520525 TENM2Q9NT68 2774 aa1.21□□□□□ -2.22
TRAPPC13-212ENST00000520525 MGAM2Q2M2H8 2515 aa1.2□□□□□ -2.22
TRAPPC13-212ENST00000520525 NSD1Q96L73 2696 aaPredicted RBP1.2□□□□□ -2.22
TRAPPC13-212ENST00000520525 LYNX1G3V0Z9 82 aa1.2□□□□□ -2.22
TRAPPC13-212ENST00000520525 LYNX1P0DP58 116 aa1.2□□□□□ -2.22
TRAPPC13-212ENST00000520525 DEFB109BQ30KR1 87 aa1.2□□□□□ -2.22
TRAPPC13-212ENST00000520525 Q6ZRX8 168 aa1.2□□□□□ -2.22
TRAPPC13-212ENST00000520525 SSBP3-AS1Q7Z2R9 100 aa1.2□□□□□ -2.22
TRAPPC13-212ENST00000520525 SDK1Q7Z5N4 2213 aa1.2□□□□□ -2.22
TRAPPC13-212ENST00000520525 FRYLO94915 3013 aa1.2□□□□□ -2.22
TRAPPC13-212ENST00000520525 RIF1Q5UIP0 2472 aaKnown RBP1.2□□□□□ -2.22
TRAPPC13-212ENST00000520525 TGP01266 2768 aa1.19□□□□□ -2.22
TRAPPC13-212ENST00000520525 ABCA1O95477 2261 aa1.19□□□□□ -2.22
TRAPPC13-212ENST00000520525 MEGF8Q7Z7M0 2845 aa1.19□□□□□ -2.22
TRAPPC13-212ENST00000520525 XIRP2A4UGR9 3374 aa1.19□□□□□ -2.22
TRAPPC13-212ENST00000520525 KNL1Q8NG31 2342 aa1.19□□□□□ -2.22
TRAPPC13-212ENST00000520525 Q96NJ1 140 aa1.19□□□□□ -2.22
TRAPPC13-212ENST00000520525 NOP10Q9NPE3 64 aaKnown RBP1.19□□□□□ -2.22
TRAPPC13-212ENST00000520525 EPPK1P58107 5090 aaKnown RBP1.19□□□□□ -2.22
TRAPPC13-212ENST00000520525 DOPEY2Q9Y3R5 2298 aa1.19□□□□□ -2.22
TRAPPC13-212ENST00000520525 CSMD1Q96PZ7 3565 aa1.19□□□□□ -2.22
TRAPPC13-212ENST00000520525 AKAP13Q12802 2813 aa1.19□□□□□ -2.22
TRAPPC13-212ENST00000520525 NBDYA0A0U1RRE5 68 aa1.18□□□□□ -2.22
TRAPPC13-212ENST00000520525 LY6G6CO95867 125 aa1.18□□□□□ -2.22
TRAPPC13-212ENST00000520525 DEFB136Q30KP8 78 aa1.18□□□□□ -2.22
TRAPPC13-212ENST00000520525 PSORS1C2Q9UIG4 136 aa1.18□□□□□ -2.22
TRAPPC13-212ENST00000520525 KMT2CQ8NEZ4 4911 aaKnown RBP1.18□□□□□ -2.22
TRAPPC13-212ENST00000520525 RYR2Q92736 4967 aa1.17□□□□□ -2.22
TRAPPC13-212ENST00000520525 ICE1Q9Y2F5 2266 aa1.17□□□□□ -2.22
TRAPPC13-212ENST00000520525 A0A0G2JQZ4 141 aa1.17□□□□□ -2.22
TRAPPC13-212ENST00000520525 SPRR1AP35321 89 aa1.17□□□□□ -2.22
TRAPPC13-212ENST00000520525 MRPL34Q9BQ48 92 aaKnown RBP1.17□□□□□ -2.22
TRAPPC13-212ENST00000520525 CRIPTQ9P021 101 aa1.17□□□□□ -2.22
TRAPPC13-212ENST00000520525 ASXL3Q9C0F0 2248 aa1.17□□□□□ -2.22
TRAPPC13-212ENST00000520525 MXRA5Q9NR99 2828 aa1.17□□□□□ -2.22
TRAPPC13-212ENST00000520525 LAMA3Q16787 3333 aa1.17□□□□□ -2.22
TRAPPC13-212ENST00000520525 F8P00451 2351 aa1.16□□□□□ -2.22
TRAPPC13-212ENST00000520525 A0A096LPF7 62 aa1.16□□□□□ -2.22
TRAPPC13-212ENST00000520525 H0YAA0 97 aa1.16□□□□□ -2.22
TRAPPC13-212ENST00000520525 H3BUX3 64 aa1.16□□□□□ -2.22
TRAPPC13-212ENST00000520525 KRTAP13-4Q3LI77 160 aa1.16□□□□□ -2.22
TRAPPC13-212ENST00000520525 LOC400499M0QZD8 3231 aa1.16□□□□□ -2.22
TRAPPC13-212ENST00000520525 CDH23Q9H251 3354 aa1.16□□□□□ -2.22
TRAPPC13-212ENST00000520525 SPTBN1Q01082 2364 aaKnown RBP1.15□□□□□ -2.22
TRAPPC13-212ENST00000520525 COL12A1Q99715 3063 aa1.15□□□□□ -2.22
TRAPPC13-212ENST00000520525 DEFB130BP0DP73 79 aa1.15□□□□□ -2.23
TRAPPC13-212ENST00000520525 DEFB130AP0DP74 79 aa1.15□□□□□ -2.23
TRAPPC13-212ENST00000520525 PRO0255Q9UI72 69 aa1.15□□□□□ -2.23
TRAPPC13-212ENST00000520525 ABCA4P78363 2273 aa1.15□□□□□ -2.23
TRAPPC13-212ENST00000520525 WNK1Q9H4A3 2382 aa1.15□□□□□ -2.23
TRAPPC13-212ENST00000520525 LRBAP50851 2863 aa1.15□□□□□ -2.23
TRAPPC13-212ENST00000520525 FSIP2Q5CZC0 6907 aa1.14□□□□□ -2.23
TRAPPC13-212ENST00000520525 TECTAO75443 2155 aa1.14□□□□□ -2.23
TRAPPC13-212ENST00000520525 ABCA13Q86UQ4 5058 aa1.14□□□□□ -2.23
TRAPPC13-212ENST00000520525 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.14□□□□□ -2.23
TRAPPC13-212ENST00000520525 SPRR1BP22528 89 aa1.14□□□□□ -2.23
TRAPPC13-212ENST00000520525 TPRXLQ17RH7 258 aa1.14□□□□□ -2.23
TRAPPC13-212ENST00000520525 H1FX-AS1Q4G0G2 97 aa1.14□□□□□ -2.23
TRAPPC13-212ENST00000520525 LELP1Q5T871 98 aa1.14□□□□□ -2.23
TRAPPC13-212ENST00000520525 C10orf99Q6UWK7 81 aa1.14□□□□□ -2.23
TRAPPC13-212ENST00000520525 ZZEF1O43149 2961 aa1.14□□□□□ -2.23
TRAPPC13-212ENST00000520525 AHCTF1Q8WYP5 2266 aa1.13□□□□□ -2.23
TRAPPC13-212ENST00000520525 K7EIL1 84 aa1.13□□□□□ -2.23
TRAPPC13-212ENST00000520525 Q6ZSA8 131 aa1.13□□□□□ -2.23
TRAPPC13-212ENST00000520525 C4orf3Q8WVX3 66 aa1.13□□□□□ -2.23
TRAPPC13-212ENST00000520525 TENM3Q9P273 2699 aa1.13□□□□□ -2.23
TRAPPC13-212ENST00000520525 SYNE2Q8WXH0 6885 aaKnown RBP1.13□□□□□ -2.23
TRAPPC13-212ENST00000520525 WNK2Q9Y3S1 2297 aa1.13□□□□□ -2.23
TRAPPC13-212ENST00000520525 HERC1Q15751 4861 aa1.12□□□□□ -2.23
TRAPPC13-212ENST00000520525 MACF1Q9UPN3 7388 aaKnown RBP1.12□□□□□ -2.23
TRAPPC13-212ENST00000520525 SPINK1P00995 79 aa1.12□□□□□ -2.23
TRAPPC13-212ENST00000520525 PRLHP81277 87 aa1.12□□□□□ -2.23
TRAPPC13-212ENST00000520525 PRRC2CQ9Y520 2896 aaKnown RBP1.12□□□□□ -2.23
TRAPPC13-212ENST00000520525 DMXL1Q9Y485 3027 aa1.12□□□□□ -2.23
TRAPPC13-212ENST00000520525 FREM2Q5SZK8 3169 aa1.12□□□□□ -2.23
TRAPPC13-212ENST00000520525 PKDREJQ9NTG1 2253 aa1.12□□□□□ -2.23
TRAPPC13-212ENST00000520525 DMBT1Q9UGM3 2413 aaPredicted RBP1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms