RNA–Protein interactions for RNA: ENST00000519813.1

TMPRSS4-208, Transcript of transmembrane serine protease 4, humanhuman

TSL 5

Gene TMPRSS4, Length 558 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMPRSS4-208ENST00000519813 KRTAP13-3Q3SY46 172 aa4.21□□□□□ -1.74
TMPRSS4-208ENST00000519813 LINC01558Q9Y6Z2 57 aa4.21□□□□□ -1.74
TMPRSS4-208ENST00000519813 KRTAP1-4P0C5Y4 121 aa4.2□□□□□ -1.74
TMPRSS4-208ENST00000519813 KRTAP13-2Q52LG2 175 aa4.2□□□□□ -1.74
TMPRSS4-208ENST00000519813 PRR26Q8N8Z3 221 aa4.2□□□□□ -1.74
TMPRSS4-208ENST00000519813 TYMSOSQ8TAI1 123 aa4.2□□□□□ -1.74
TMPRSS4-208ENST00000519813 BRK1Q8WUW1 75 aa4.2□□□□□ -1.74
TMPRSS4-208ENST00000519813 PRR4Q16378 134 aa4.19□□□□□ -1.74
TMPRSS4-208ENST00000519813 PCOTHQ58A44 107 aa4.19□□□□□ -1.74
TMPRSS4-208ENST00000519813 A0A087X002 238 aa4.18□□□□□ -1.74
TMPRSS4-208ENST00000519813 IGKV2-30P06310 120 aa4.18□□□□□ -1.74
TMPRSS4-208ENST00000519813 Q75L30 129 aa4.18□□□□□ -1.74
TMPRSS4-208ENST00000519813 NOTCH2NLQ7Z3S9 236 aa4.18□□□□□ -1.74
TMPRSS4-208ENST00000519813 DMAC1Q96GE9 116 aa4.17□□□□□ -1.74
TMPRSS4-208ENST00000519813 HRES1P13985 223 aa4.16□□□□□ -1.74
TMPRSS4-208ENST00000519813 Q5W150 140 aa4.16□□□□□ -1.74
TMPRSS4-208ENST00000519813 A8MUN3 132 aa4.15□□□□□ -1.75
TMPRSS4-208ENST00000519813 KRTAP16-1A8MUX0 517 aa4.15□□□□□ -1.75
TMPRSS4-208ENST00000519813 PSPHP1O15172 72 aa4.15□□□□□ -1.75
TMPRSS4-208ENST00000519813 Q5VV11 94 aa4.15□□□□□ -1.75
TMPRSS4-208ENST00000519813 PRR15LQ9BU68 103 aa4.15□□□□□ -1.75
TMPRSS4-208ENST00000519813 VPS13DQ5THJ4 4388 aa4.15□□□□□ -1.75
TMPRSS4-208ENST00000519813 CHKB-CPT1BH3BT56 60 aa4.14□□□□□ -1.75
TMPRSS4-208ENST00000519813 LINC00304Q8N9R0 145 aa4.14□□□□□ -1.75
TMPRSS4-208ENST00000519813 TGP01266 2768 aa4.14□□□□□ -1.75
TMPRSS4-208ENST00000519813 ATP11AUNQ6ZP68 121 aa4.13□□□□□ -1.75
TMPRSS4-208ENST00000519813 SPTSSBQ8NFR3 76 aa4.11□□□□□ -1.75
TMPRSS4-208ENST00000519813 CDC42SE1Q9NRR8 79 aa4.11□□□□□ -1.75
TMPRSS4-208ENST00000519813 COL7A1Q02388 2944 aa4.11□□□□□ -1.75
TMPRSS4-208ENST00000519813 A6NED7 52 aa4.09□□□□□ -1.75
TMPRSS4-208ENST00000519813 C7orf65Q6ZTY9 151 aa4.09□□□□□ -1.75
TMPRSS4-208ENST00000519813 DNAH10Q8IVF4 4471 aa4.09□□□□□ -1.75
TMPRSS4-208ENST00000519813 PLECQ15149 4684 aaKnown RBP4.09□□□□□ -1.75
TMPRSS4-208ENST00000519813 DNAH6Q9C0G6 4158 aa4.09□□□□□ -1.76
TMPRSS4-208ENST00000519813 A0A1B0GVY2 172 aa4.08□□□□□ -1.76
TMPRSS4-208ENST00000519813 PRKDCP78527 4128 aaKnown RBP4.07□□□□□ -1.76
TMPRSS4-208ENST00000519813 DNAH7Q8WXX0 4024 aa4.07□□□□□ -1.76
TMPRSS4-208ENST00000519813 IGKV2D-30A0A075B6S6 120 aa4.07□□□□□ -1.76
TMPRSS4-208ENST00000519813 C20orf166-AS1Q96NR2 134 aa4.07□□□□□ -1.76
TMPRSS4-208ENST00000519813 CSMD3Q7Z407 3707 aa4.07□□□□□ -1.76
TMPRSS4-208ENST00000519813 A8MUU9 505 aa4.06□□□□□ -1.76
TMPRSS4-208ENST00000519813 PMAIP1Q13794 54 aa4.06□□□□□ -1.76
TMPRSS4-208ENST00000519813 DNAH17Q9UFH2 4485 aa4.05□□□□□ -1.76
TMPRSS4-208ENST00000519813 A0A1B0GU69 56 aa4.04□□□□□ -1.76
TMPRSS4-208ENST00000519813 SEC61GP60059 68 aa4.03□□□□□ -1.76
TMPRSS4-208ENST00000519813 STARD9Q9P2P6 4700 aa4.03□□□□□ -1.76
TMPRSS4-208ENST00000519813 MEGF8Q7Z7M0 2845 aa4.03□□□□□ -1.76
TMPRSS4-208ENST00000519813 KMT2AQ03164 3969 aa4.02□□□□□ -1.77
TMPRSS4-208ENST00000519813 UQCR11O14957 56 aa4.02□□□□□ -1.77
TMPRSS4-208ENST00000519813 LCA10Q71F78 164 aa4.02□□□□□ -1.77
TMPRSS4-208ENST00000519813 KRTAP17-1Q9BYP8 105 aa4.02□□□□□ -1.77
TMPRSS4-208ENST00000519813 LYSTQ99698 3801 aa4.01□□□□□ -1.77
TMPRSS4-208ENST00000519813 DNAH2Q9P225 4427 aa4.01□□□□□ -1.77
TMPRSS4-208ENST00000519813 KRTAP10-4P60372 401 aaPredicted RBP4.01□□□□□ -1.77
TMPRSS4-208ENST00000519813 TENM2Q9NT68 2774 aa4.01□□□□□ -1.77
TMPRSS4-208ENST00000519813 J3QL48 77 aa4□□□□□ -1.77
TMPRSS4-208ENST00000519813 SPATA8Q6RVD6 105 aa4□□□□□ -1.77
TMPRSS4-208ENST00000519813 DNAH8Q96JB1 4490 aa3.99□□□□□ -1.77
TMPRSS4-208ENST00000519813 ALMS1Q8TCU4 4167 aa3.99□□□□□ -1.77
TMPRSS4-208ENST00000519813 SRRM2Q9UQ35 2752 aaKnown RBP3.99□□□□□ -1.77
TMPRSS4-208ENST00000519813 HECTD4Q9Y4D8 3996 aa3.98□□□□□ -1.77
TMPRSS4-208ENST00000519813 RETNLBQ9BQ08 111 aa3.98□□□□□ -1.77
TMPRSS4-208ENST00000519813 SMR3BP02814 79 aaPredicted RBP3.97□□□□□ -1.77
TMPRSS4-208ENST00000519813 KRTAP10-8P60410 259 aa3.97□□□□□ -1.77
TMPRSS4-208ENST00000519813 KTN1-AS1Q86SY8 53 aa3.96□□□□□ -1.78
TMPRSS4-208ENST00000519813 SPINK7P58062 85 aa3.95□□□□□ -1.78
TMPRSS4-208ENST00000519813 A6NN06 94 aa3.94□□□□□ -1.78
TMPRSS4-208ENST00000519813 MIR22HGQ0VDD5 57 aa3.94□□□□□ -1.78
TMPRSS4-208ENST00000519813 KRTAP3-3Q9BYR6 98 aa3.93□□□□□ -1.78
TMPRSS4-208ENST00000519813 KRTAP3-2Q9BYR7 98 aa3.93□□□□□ -1.78
TMPRSS4-208ENST00000519813 COX6B2Q6YFQ2 88 aa3.92□□□□□ -1.78
TMPRSS4-208ENST00000519813 DNAH11Q96DT5 4516 aa3.92□□□□□ -1.78
TMPRSS4-208ENST00000519813 FRAS1Q86XX4 4008 aa3.91□□□□□ -1.78
TMPRSS4-208ENST00000519813 C9orf92A6NGG3 77 aa3.89□□□□□ -1.79
TMPRSS4-208ENST00000519813 RPL37P61927 97 aaKnown RBP3.88□□□□□ -1.79
TMPRSS4-208ENST00000519813 LCE2DQ5TA82 110 aaPredicted RBP3.88□□□□□ -1.79
TMPRSS4-208ENST00000519813 Q8N1X5 172 aa3.88□□□□□ -1.79
TMPRSS4-208ENST00000519813 DNAH5Q8TE73 4624 aa3.88□□□□□ -1.79
TMPRSS4-208ENST00000519813 Q5VSD8 79 aa3.87□□□□□ -1.79
TMPRSS4-208ENST00000519813 KMT2CQ8NEZ4 4911 aaKnown RBP3.87□□□□□ -1.79
TMPRSS4-208ENST00000519813 A8MU10 97 aa3.86□□□□□ -1.79
TMPRSS4-208ENST00000519813 LRP1BQ9NZR2 4599 aa3.85□□□□□ -1.79
TMPRSS4-208ENST00000519813 A0A1B0GU33 70 aa3.85□□□□□ -1.79
TMPRSS4-208ENST00000519813 KRTAP3-1Q9BYR8 98 aa3.85□□□□□ -1.79
TMPRSS4-208ENST00000519813 PKD1P98161 4303 aa3.85□□□□□ -1.79
TMPRSS4-208ENST00000519813 FAT2Q9NYQ8 4349 aa3.85□□□□□ -1.79
TMPRSS4-208ENST00000519813 VPS13BQ7Z7G8 4022 aa3.85□□□□□ -1.79
TMPRSS4-208ENST00000519813 RYR3Q15413 4870 aa3.84□□□□□ -1.8
TMPRSS4-208ENST00000519813 K7ERS5 55 aa3.83□□□□□ -1.8
TMPRSS4-208ENST00000519813 SACSQ9NZJ4 4579 aa3.82□□□□□ -1.8
TMPRSS4-208ENST00000519813 H1FX-AS1Q4G0G2 97 aa3.8□□□□□ -1.8
TMPRSS4-208ENST00000519813 XP32Q5T750 250 aa3.8□□□□□ -1.8
TMPRSS4-208ENST00000519813 FLG2Q5D862 2391 aaPredicted RBP3.79□□□□□ -1.8
TMPRSS4-208ENST00000519813 TPRXLQ17RH7 258 aa3.79□□□□□ -1.8
TMPRSS4-208ENST00000519813 RBM12B-AS1Q9P1G2 102 aa3.79□□□□□ -1.8
TMPRSS4-208ENST00000519813 BIRC6Q9NR09 4857 aa3.78□□□□□ -1.8
TMPRSS4-208ENST00000519813 HYDINQ4G0P3 5121 aa3.76□□□□□ -1.81
TMPRSS4-208ENST00000519813 MT1HL1P0DM35 61 aa3.75□□□□□ -1.81
TMPRSS4-208ENST00000519813 S4R3F8 94 aa3.74□□□□□ -1.81
TMPRSS4-208ENST00000519813 PKHD1L1Q86WI1 4243 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms