RNA–Protein interactions for RNA: ENST00000519684.5

HMGB4-203, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB4, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-203ENST00000519684 H0Y9P7 68 aa4.95□□□□□ -1.62
HMGB4-203ENST00000519684 SPINK6Q6UWN8 80 aa4.95□□□□□ -1.62
HMGB4-203ENST00000519684 DNAH5Q8TE73 4624 aa4.95□□□□□ -1.62
HMGB4-203ENST00000519684 ZCCHC13Q8WW36 166 aaKnown RBP4.95□□□□□ -1.62
HMGB4-203ENST00000519684 A0A087X002 238 aa4.94□□□□□ -1.62
HMGB4-203ENST00000519684 H3BPC8 53 aa4.94□□□□□ -1.62
HMGB4-203ENST00000519684 ASB16-AS1Q495Z4 193 aa4.94□□□□□ -1.62
HMGB4-203ENST00000519684 KRTAP13-2Q52LG2 175 aa4.94□□□□□ -1.62
HMGB4-203ENST00000519684 BRK1Q8WUW1 75 aa4.94□□□□□ -1.62
HMGB4-203ENST00000519684 TP53AIP1Q9HCN2 124 aa4.94□□□□□ -1.62
HMGB4-203ENST00000519684 HYDINQ4G0P3 5121 aa4.93□□□□□ -1.62
HMGB4-203ENST00000519684 LINC00208Q96KT6 92 aa4.93□□□□□ -1.62
HMGB4-203ENST00000519684 NDUFS5O43920 106 aa4.92□□□□□ -1.62
HMGB4-203ENST00000519684 TRAV22A0A0B4J277 110 aa4.92□□□□□ -1.62
HMGB4-203ENST00000519684 FAT2Q9NYQ8 4349 aa4.92□□□□□ -1.62
HMGB4-203ENST00000519684 MRPL34Q9BQ48 92 aaKnown RBP4.91□□□□□ -1.62
HMGB4-203ENST00000519684 KRTAP1-4P0C5Y4 121 aa4.91□□□□□ -1.62
HMGB4-203ENST00000519684 LIMD2Q9BT23 127 aa4.91□□□□□ -1.62
HMGB4-203ENST00000519684 PLA2G1BP04054 148 aaKnown RBP4.9□□□□□ -1.62
HMGB4-203ENST00000519684 C8orf87E5RJ46 101 aa4.9□□□□□ -1.63
HMGB4-203ENST00000519684 J3QL48 77 aa4.9□□□□□ -1.63
HMGB4-203ENST00000519684 C1orf64Q8NEQ6 169 aa4.9□□□□□ -1.63
HMGB4-203ENST00000519684 A0A1B0GVY2 172 aa4.89□□□□□ -1.63
HMGB4-203ENST00000519684 TYMSOSQ8TAI1 123 aa4.89□□□□□ -1.63
HMGB4-203ENST00000519684 RBM12B-AS1Q9P1G2 102 aa4.89□□□□□ -1.63
HMGB4-203ENST00000519684 NOTCH2NLQ7Z3S9 236 aa4.88□□□□□ -1.63
HMGB4-203ENST00000519684 SMR3BP02814 79 aaPredicted RBP4.86□□□□□ -1.63
HMGB4-203ENST00000519684 SMIM26A0A096LP01 95 aa4.86□□□□□ -1.63
HMGB4-203ENST00000519684 LINC00313P59037 77 aa4.85□□□□□ -1.63
HMGB4-203ENST00000519684 SPINK1P00995 79 aa4.85□□□□□ -1.63
HMGB4-203ENST00000519684 SPANXA2-OT1Q8N9U9 137 aa4.84□□□□□ -1.63
HMGB4-203ENST00000519684 CYP4F30PQ9H0H9 118 aa4.84□□□□□ -1.63
HMGB4-203ENST00000519684 PRR4Q16378 134 aa4.84□□□□□ -1.64
HMGB4-203ENST00000519684 LRP1BQ9NZR2 4599 aa4.83□□□□□ -1.64
HMGB4-203ENST00000519684 SACSQ9NZJ4 4579 aa4.83□□□□□ -1.64
HMGB4-203ENST00000519684 LINC00304Q8N9R0 145 aa4.83□□□□□ -1.64
HMGB4-203ENST00000519684 SPAG11AQ6PDA7 123 aa4.82□□□□□ -1.64
HMGB4-203ENST00000519684 PCOTHQ58A44 107 aa4.81□□□□□ -1.64
HMGB4-203ENST00000519684 LOC101927531A0A1B0GV80 90 aa4.8□□□□□ -1.64
HMGB4-203ENST00000519684 RPS29P62273 56 aaKnown RBP4.8□□□□□ -1.64
HMGB4-203ENST00000519684 VPS13BQ7Z7G8 4022 aa4.79□□□□□ -1.64
HMGB4-203ENST00000519684 FP248Q71RG6 208 aaPredicted RBP4.79□□□□□ -1.64
HMGB4-203ENST00000519684 FAM229AH3BQW9 127 aa4.78□□□□□ -1.64
HMGB4-203ENST00000519684 IGLV7-46A0A075B6I9 117 aa4.78□□□□□ -1.64
HMGB4-203ENST00000519684 KRTAP10-4P60372 401 aaPredicted RBP4.78□□□□□ -1.64
HMGB4-203ENST00000519684 Q5W150 140 aa4.78□□□□□ -1.64
HMGB4-203ENST00000519684 Q8N9P0 234 aaPredicted RBP4.78□□□□□ -1.64
HMGB4-203ENST00000519684 PKHD1P08F94 4074 aa4.77□□□□□ -1.65
HMGB4-203ENST00000519684 KRTAP16-1A8MUX0 517 aa4.76□□□□□ -1.65
HMGB4-203ENST00000519684 KRTAP13-3Q3SY46 172 aa4.76□□□□□ -1.65
HMGB4-203ENST00000519684 MPLKIPQ8TAP9 179 aa4.76□□□□□ -1.65
HMGB4-203ENST00000519684 DYNC1H1Q14204 4646 aaKnown RBP4.75□□□□□ -1.65
HMGB4-203ENST00000519684 RETNLBQ9BQ08 111 aa4.74□□□□□ -1.65
HMGB4-203ENST00000519684 RYR2Q92736 4967 aa4.74□□□□□ -1.65
HMGB4-203ENST00000519684 COA5Q86WW8 74 aa4.72□□□□□ -1.65
HMGB4-203ENST00000519684 IGKV2-30P06310 120 aa4.71□□□□□ -1.66
HMGB4-203ENST00000519684 Q1T7F1 81 aa4.71□□□□□ -1.66
HMGB4-203ENST00000519684 APOBP04114 4563 aaKnown RBP4.7□□□□□ -1.66
HMGB4-203ENST00000519684 KTN1-AS1Q86SY8 53 aa4.69□□□□□ -1.66
HMGB4-203ENST00000519684 Q5VSD8 79 aa4.69□□□□□ -1.66
HMGB4-203ENST00000519684 Q75L30 129 aa4.68□□□□□ -1.66
HMGB4-203ENST00000519684 A8MUN3 132 aa4.68□□□□□ -1.66
HMGB4-203ENST00000519684 HRES1P13985 223 aa4.68□□□□□ -1.66
HMGB4-203ENST00000519684 IGKV2D-30A0A075B6S6 120 aa4.67□□□□□ -1.66
HMGB4-203ENST00000519684 ACYP2P14621 99 aa4.66□□□□□ -1.66
HMGB4-203ENST00000519684 C9orf92A6NGG3 77 aa4.66□□□□□ -1.66
HMGB4-203ENST00000519684 KMT2CQ8NEZ4 4911 aaKnown RBP4.65□□□□□ -1.67
HMGB4-203ENST00000519684 PSPHP1O15172 72 aa4.64□□□□□ -1.67
HMGB4-203ENST00000519684 DMAC1Q96GE9 116 aa4.64□□□□□ -1.67
HMGB4-203ENST00000519684 PKHD1L1Q86WI1 4243 aa4.63□□□□□ -1.67
HMGB4-203ENST00000519684 C7orf65Q6ZTY9 151 aa4.63□□□□□ -1.67
HMGB4-203ENST00000519684 CHKB-CPT1BH3BT56 60 aa4.62□□□□□ -1.67
HMGB4-203ENST00000519684 C20orf166-AS1Q96NR2 134 aa4.62□□□□□ -1.67
HMGB4-203ENST00000519684 A8MUU9 505 aa4.62□□□□□ -1.67
HMGB4-203ENST00000519684 KRTAP10-8P60410 259 aa4.62□□□□□ -1.67
HMGB4-203ENST00000519684 Q8N1X5 172 aa4.62□□□□□ -1.67
HMGB4-203ENST00000519684 FAT1Q14517 4588 aa4.61□□□□□ -1.67
HMGB4-203ENST00000519684 PRR15LQ9BU68 103 aa4.61□□□□□ -1.67
HMGB4-203ENST00000519684 LCE2BO14633 110 aa4.58□□□□□ -1.68
HMGB4-203ENST00000519684 LINC01558Q9Y6Z2 57 aa4.57□□□□□ -1.68
HMGB4-203ENST00000519684 Q5VV11 94 aa4.57□□□□□ -1.68
HMGB4-203ENST00000519684 LCA10Q71F78 164 aa4.57□□□□□ -1.68
HMGB4-203ENST00000519684 FLG2Q5D862 2391 aaPredicted RBP4.54□□□□□ -1.68
HMGB4-203ENST00000519684 HSPG2P98160 4391 aa4.53□□□□□ -1.68
HMGB4-203ENST00000519684 RYR3Q15413 4870 aa4.53□□□□□ -1.68
HMGB4-203ENST00000519684 KRTAP17-1Q9BYP8 105 aa4.52□□□□□ -1.69
HMGB4-203ENST00000519684 SPINK7P58062 85 aa4.51□□□□□ -1.69
HMGB4-203ENST00000519684 ATP11AUNQ6ZP68 121 aa4.51□□□□□ -1.69
HMGB4-203ENST00000519684 A6NED7 52 aa4.51□□□□□ -1.69
HMGB4-203ENST00000519684 LINC01554Q52M75 96 aa4.5□□□□□ -1.69
HMGB4-203ENST00000519684 RYR1P21817 5038 aa4.5□□□□□ -1.69
HMGB4-203ENST00000519684 MT1HL1P0DM35 61 aa4.49□□□□□ -1.69
HMGB4-203ENST00000519684 RPL37P61927 97 aaKnown RBP4.48□□□□□ -1.69
HMGB4-203ENST00000519684 SPTSSBQ8NFR3 76 aa4.48□□□□□ -1.69
HMGB4-203ENST00000519684 TNXBP22105 4242 aa4.48□□□□□ -1.69
HMGB4-203ENST00000519684 A0A1B0GU69 56 aa4.47□□□□□ -1.69
HMGB4-203ENST00000519684 XP32Q5T750 250 aa4.46□□□□□ -1.69
HMGB4-203ENST00000519684 LRP1Q07954 4544 aaKnown RBP4.46□□□□□ -1.7
HMGB4-203ENST00000519684 FAT3Q8TDW7 4589 aa4.45□□□□□ -1.7
HMGB4-203ENST00000519684 SEC61BP60468 96 aaKnown RBP4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms