RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 C8orf87E5RJ46 101 aa6.14□□□□□ -1.43
CSMD1-205ENST00000519623 LCE2BO14633 110 aa6.14□□□□□ -1.43
CSMD1-205ENST00000519623 RBM3P98179 157 aaKnown RBP6.14□□□□□ -1.43
CSMD1-205ENST00000519623 VPS25Q9BRG1 176 aa6.14□□□□□ -1.43
CSMD1-205ENST00000519623 KRTAP9-7A8MTY7 169 aa6.12□□□□□ -1.43
CSMD1-205ENST00000519623 UQCR10Q9UDW1 63 aa6.12□□□□□ -1.43
CSMD1-205ENST00000519623 SCGB1C2P0DMR2 95 aa6.11□□□□□ -1.43
CSMD1-205ENST00000519623 KRTAP10-10P60014 251 aa6.11□□□□□ -1.43
CSMD1-205ENST00000519623 DSCR8Q96T75 97 aa6.11□□□□□ -1.43
CSMD1-205ENST00000519623 BAALC-AS2P0C853 105 aa6.1□□□□□ -1.43
CSMD1-205ENST00000519623 ZCCHC13Q8WW36 166 aaKnown RBP6.1□□□□□ -1.43
CSMD1-205ENST00000519623 Q6ZQT0 140 aa6.09□□□□□ -1.43
CSMD1-205ENST00000519623 C9JAW5 83 aa6.08□□□□□ -1.44
CSMD1-205ENST00000519623 J3KT08 172 aa6.08□□□□□ -1.44
CSMD1-205ENST00000519623 SPINK7P58062 85 aa6.08□□□□□ -1.44
CSMD1-205ENST00000519623 FCGBPQ9Y6R7 5405 aaPredicted RBP6.08□□□□□ -1.44
CSMD1-205ENST00000519623 C21orf62-AS1Q17RA5 79 aa6.07□□□□□ -1.44
CSMD1-205ENST00000519623 KRTAP19-1Q8IUB9 90 aa6.07□□□□□ -1.44
CSMD1-205ENST00000519623 Q8N9P0 234 aaPredicted RBP6.07□□□□□ -1.44
CSMD1-205ENST00000519623 MTURNQ8N3F0 131 aa6.06□□□□□ -1.44
CSMD1-205ENST00000519623 NDUFB1O75438 58 aa6.03□□□□□ -1.44
CSMD1-205ENST00000519623 C8orf17Q9NRJ1 99 aa6.02□□□□□ -1.45
CSMD1-205ENST00000519623 A8MWP4 228 aa6.01□□□□□ -1.45
CSMD1-205ENST00000519623 LOC110117498A0A087WWA1 95 aa6□□□□□ -1.45
CSMD1-205ENST00000519623 IGKV3D-7A0A0C4DH55 119 aa6□□□□□ -1.45
CSMD1-205ENST00000519623 A0A1B0GW54 56 aa6□□□□□ -1.45
CSMD1-205ENST00000519623 JMJD7-PLA2G4BH0Y9G9 81 aa5.99□□□□□ -1.45
CSMD1-205ENST00000519623 ATXN8Q156A1 80 aa5.99□□□□□ -1.45
CSMD1-205ENST00000519623 TMA7Q9Y2S6 64 aaKnown RBP5.99□□□□□ -1.45
CSMD1-205ENST00000519623 NAA38Q9BRA0 125 aaKnown RBP5.98□□□□□ -1.45
CSMD1-205ENST00000519623 PDE6GP18545 87 aa5.97□□□□□ -1.45
CSMD1-205ENST00000519623 LYRM7Q5U5X0 104 aa5.97□□□□□ -1.45
CSMD1-205ENST00000519623 Q6ZVQ6 151 aa5.97□□□□□ -1.45
CSMD1-205ENST00000519623 WFDC13Q8IUB5 93 aa5.97□□□□□ -1.45
CSMD1-205ENST00000519623 PRR15Q8IV56 129 aa5.96□□□□□ -1.46
CSMD1-205ENST00000519623 C14orf132Q9NPU4 83 aa5.95□□□□□ -1.46
CSMD1-205ENST00000519623 M0R143 59 aa5.94□□□□□ -1.46
CSMD1-205ENST00000519623 KRTAP19-6Q3LI70 58 aa5.94□□□□□ -1.46
CSMD1-205ENST00000519623 NREPQ16612 68 aa5.92□□□□□ -1.46
CSMD1-205ENST00000519623 MMP24-AS1A0A0U1RRL7 71 aa5.91□□□□□ -1.46
CSMD1-205ENST00000519623 TMEM254Q8TBM7 123 aa5.91□□□□□ -1.46
CSMD1-205ENST00000519623 MRPL34Q9BQ48 92 aaKnown RBP5.91□□□□□ -1.46
CSMD1-205ENST00000519623 LINC00846Q9NV44 126 aa5.89□□□□□ -1.47
CSMD1-205ENST00000519623 H1FX-AS1Q4G0G2 97 aa5.88□□□□□ -1.47
CSMD1-205ENST00000519623 MACF1Q9UPN3 7388 aaKnown RBP5.87□□□□□ -1.47
CSMD1-205ENST00000519623 SYNE2Q8WXH0 6885 aaKnown RBP5.86□□□□□ -1.47
CSMD1-205ENST00000519623 hDV103S1A0JD37 113 aa5.86□□□□□ -1.47
CSMD1-205ENST00000519623 K7EQZ3 153 aa5.86□□□□□ -1.47
CSMD1-205ENST00000519623 Q5W150 140 aa5.84□□□□□ -1.47
CSMD1-205ENST00000519623 NDUFS5O43920 106 aa5.83□□□□□ -1.48
CSMD1-205ENST00000519623 IGKV2D-30A0A075B6S6 120 aa5.8□□□□□ -1.48
CSMD1-205ENST00000519623 H3BT86 120 aa5.8□□□□□ -1.48
CSMD1-205ENST00000519623 IGKV2-30P06310 120 aa5.8□□□□□ -1.48
CSMD1-205ENST00000519623 BPY2O14599 106 aa5.79□□□□□ -1.48
CSMD1-205ENST00000519623 SMIM6P0DI80 62 aa5.79□□□□□ -1.48
CSMD1-205ENST00000519623 BATFQ16520 125 aa5.79□□□□□ -1.48
CSMD1-205ENST00000519623 C9orf118A6NHY6 69 aa5.78□□□□□ -1.48
CSMD1-205ENST00000519623 C7orf65Q6ZTY9 151 aa5.77□□□□□ -1.49
CSMD1-205ENST00000519623 TAX1BP3O14907 124 aa5.76□□□□□ -1.49
CSMD1-205ENST00000519623 A0A1W2PPM0 123 aa5.75□□□□□ -1.49
CSMD1-205ENST00000519623 Q8N9L7 120 aa5.75□□□□□ -1.49
CSMD1-205ENST00000519623 HCG22E2RYF7 251 aa5.74□□□□□ -1.49
CSMD1-205ENST00000519623 TSTD3H0UI37 97 aa5.74□□□□□ -1.49
CSMD1-205ENST00000519623 C4orf26Q17RF5 130 aa5.74□□□□□ -1.49
CSMD1-205ENST00000519623 CASC2Q6XLA1 102 aa5.74□□□□□ -1.49
CSMD1-205ENST00000519623 KRTAP6-3Q3LI67 103 aa5.73□□□□□ -1.49
CSMD1-205ENST00000519623 CXCL6P80162 114 aa5.7□□□□□ -1.5
CSMD1-205ENST00000519623 KRTAP3-1Q9BYR8 98 aa5.7□□□□□ -1.5
CSMD1-205ENST00000519623 SMCPP49901 116 aaPredicted RBP5.68□□□□□ -1.5
CSMD1-205ENST00000519623 C5orf47Q569G3 176 aa5.67□□□□□ -1.5
CSMD1-205ENST00000519623 SPCS1Q9Y6A9 102 aa5.64□□□□□ -1.51
CSMD1-205ENST00000519623 MT1BP07438 61 aa5.63□□□□□ -1.51
CSMD1-205ENST00000519623 LOC105371267A0A1B0GV96 52 aa5.62□□□□□ -1.51
CSMD1-205ENST00000519623 FAM236AA0A1B0GUQ0 79 aa5.61□□□□□ -1.51
CSMD1-205ENST00000519623 FAM236BA0A1B0GV22 79 aa5.61□□□□□ -1.51
CSMD1-205ENST00000519623 CSAG1Q6PB30 78 aa5.61□□□□□ -1.51
CSMD1-205ENST00000519623 C1orf64Q8NEQ6 169 aa5.61□□□□□ -1.51
CSMD1-205ENST00000519623 UBL5Q9BZL1 73 aa5.61□□□□□ -1.51
CSMD1-205ENST00000519623 PRO0461Q9UI25 63 aa5.61□□□□□ -1.51
CSMD1-205ENST00000519623 S4R3F8 94 aa5.61□□□□□ -1.51
CSMD1-205ENST00000519623 KRTAP19-8Q3LI54 63 aa5.6□□□□□ -1.51
CSMD1-205ENST00000519623 LCA10Q71F78 164 aa5.6□□□□□ -1.51
CSMD1-205ENST00000519623 SPRR2GQ9BYE4 73 aa5.6□□□□□ -1.51
CSMD1-205ENST00000519623 A6NN06 94 aa5.58□□□□□ -1.52
CSMD1-205ENST00000519623 Q5VV11 94 aa5.57□□□□□ -1.52
CSMD1-205ENST00000519623 KRTAP3-3Q9BYR6 98 aa5.54□□□□□ -1.52
CSMD1-205ENST00000519623 TP53AIP1Q9HCN2 124 aa5.54□□□□□ -1.52
CSMD1-205ENST00000519623 K7EP34 96 aa5.52□□□□□ -1.53
CSMD1-205ENST00000519623 KRTAP10-5P60370 271 aa5.52□□□□□ -1.53
CSMD1-205ENST00000519623 KLKP1Q107X0 134 aa5.52□□□□□ -1.53
CSMD1-205ENST00000519623 COL5A1-AS1Q5SY13 56 aa5.52□□□□□ -1.53
CSMD1-205ENST00000519623 NEBP20929 6669 aa5.5□□□□□ -1.53
CSMD1-205ENST00000519623 CYP4F30PQ9H0H9 118 aa5.49□□□□□ -1.53
CSMD1-205ENST00000519623 A0A087WVE0 104 aa5.47□□□□□ -1.53
CSMD1-205ENST00000519623 MUC12Q9UKN1 5478 aa5.45□□□□□ -1.54
CSMD1-205ENST00000519623 F8W1H4 67 aa5.43□□□□□ -1.54
CSMD1-205ENST00000519623 ETDBQ3ZM63 59 aa5.43□□□□□ -1.54
CSMD1-205ENST00000519623 CRIPTQ9P021 101 aa5.43□□□□□ -1.54
CSMD1-205ENST00000519623 GTF2H5Q6ZYL4 71 aa5.42□□□□□ -1.54
CSMD1-205ENST00000519623 KRTAP5-9P26371 169 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 172.5 ms