RNA–Protein interactions for RNA: ENST00000519540.5

FAM49B-214, Transcript of family with sequence similarity 49 member B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49B, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-214ENST00000519540 C4orf48Q5BLP8 95 aa10.62□□□□□ -0.71
FAM49B-214ENST00000519540 C1orf195Q5TG92 126 aa10.62□□□□□ -0.71
FAM49B-214ENST00000519540 NOTCH2NLQ7Z3S9 236 aa10.61□□□□□ -0.71
FAM49B-214ENST00000519540 LIMD2Q9BT23 127 aa10.61□□□□□ -0.71
FAM49B-214ENST00000519540 NDUFC1O43677 76 aa10.59□□□□□ -0.71
FAM49B-214ENST00000519540 SPINK1P00995 79 aa10.58□□□□□ -0.72
FAM49B-214ENST00000519540 RYR3Q15413 4870 aa10.58□□□□□ -0.72
FAM49B-214ENST00000519540 FAT1Q14517 4588 aa10.57□□□□□ -0.72
FAM49B-214ENST00000519540 LINC00304Q8N9R0 145 aa10.55□□□□□ -0.72
FAM49B-214ENST00000519540 ZCCHC13Q8WW36 166 aaKnown RBP10.54□□□□□ -0.72
FAM49B-214ENST00000519540 MRPL34Q9BQ48 92 aaKnown RBP10.54□□□□□ -0.72
FAM49B-214ENST00000519540 FAM229AH3BQW9 127 aa10.53□□□□□ -0.72
FAM49B-214ENST00000519540 MP68P56378 58 aa10.52□□□□□ -0.73
FAM49B-214ENST00000519540 SPAG11AQ6PDA7 123 aa10.52□□□□□ -0.73
FAM49B-214ENST00000519540 C8orf87E5RJ46 101 aa10.51□□□□□ -0.73
FAM49B-214ENST00000519540 TP53AIP1Q9HCN2 124 aa10.51□□□□□ -0.73
FAM49B-214ENST00000519540 RPS29P62273 56 aaKnown RBP10.5□□□□□ -0.73
FAM49B-214ENST00000519540 H0Y9P7 68 aa10.5□□□□□ -0.73
FAM49B-214ENST00000519540 FAM236DA0A1B0GTK5 79 aa10.48□□□□□ -0.73
FAM49B-214ENST00000519540 FAM236CP0DP71 79 aa10.48□□□□□ -0.73
FAM49B-214ENST00000519540 NDUFS5O43920 106 aa10.48□□□□□ -0.73
FAM49B-214ENST00000519540 TRAV22A0A0B4J277 110 aa10.47□□□□□ -0.73
FAM49B-214ENST00000519540 LINC00313P59037 77 aa10.47□□□□□ -0.73
FAM49B-214ENST00000519540 LINC00208Q96KT6 92 aa10.47□□□□□ -0.73
FAM49B-214ENST00000519540 H3BPC8 53 aa10.46□□□□□ -0.74
FAM49B-214ENST00000519540 Q5VSD8 79 aa10.45□□□□□ -0.74
FAM49B-214ENST00000519540 C1orf64Q8NEQ6 169 aa10.41□□□□□ -0.74
FAM49B-214ENST00000519540 RPS28P62857 69 aaKnown RBP10.4□□□□□ -0.74
FAM49B-214ENST00000519540 HSPG2P98160 4391 aa10.39□□□□□ -0.75
FAM49B-214ENST00000519540 ATP5EP56381 51 aaPredicted RBP10.38□□□□□ -0.75
FAM49B-214ENST00000519540 PKHD1L1Q86WI1 4243 aa10.37□□□□□ -0.75
FAM49B-214ENST00000519540 KRTAP16-1A8MUX0 517 aa10.37□□□□□ -0.75
FAM49B-214ENST00000519540 Q8N9P0 234 aaPredicted RBP10.36□□□□□ -0.75
FAM49B-214ENST00000519540 KRTAP17-1Q9BYP8 105 aa10.36□□□□□ -0.75
FAM49B-214ENST00000519540 Q5W150 140 aa10.34□□□□□ -0.75
FAM49B-214ENST00000519540 RYR1P21817 5038 aa10.33□□□□□ -0.76
FAM49B-214ENST00000519540 KRTAP13-3Q3SY46 172 aa10.31□□□□□ -0.76
FAM49B-214ENST00000519540 SERP1Q9Y6X1 66 aa10.31□□□□□ -0.76
FAM49B-214ENST00000519540 OXTP01178 125 aa10.3□□□□□ -0.76
FAM49B-214ENST00000519540 KRTAP10-8P60410 259 aa10.3□□□□□ -0.76
FAM49B-214ENST00000519540 Q8N1X5 172 aa10.28□□□□□ -0.76
FAM49B-214ENST00000519540 SPANXA2-OT1Q8N9U9 137 aa10.24□□□□□ -0.77
FAM49B-214ENST00000519540 KIAA1109Q2LD37 5005 aa10.24□□□□□ -0.77
FAM49B-214ENST00000519540 LOC101927531A0A1B0GV80 90 aa10.23□□□□□ -0.77
FAM49B-214ENST00000519540 PRR4Q16378 134 aa10.23□□□□□ -0.77
FAM49B-214ENST00000519540 RETNLBQ9BQ08 111 aa10.23□□□□□ -0.77
FAM49B-214ENST00000519540 CYP4F30PQ9H0H9 118 aa10.23□□□□□ -0.77
FAM49B-214ENST00000519540 PCOTHQ58A44 107 aa10.22□□□□□ -0.77
FAM49B-214ENST00000519540 FLG2Q5D862 2391 aaPredicted RBP10.21□□□□□ -0.77
FAM49B-214ENST00000519540 EPPK1P58107 5090 aaKnown RBP10.2□□□□□ -0.78
FAM49B-214ENST00000519540 LRP1Q07954 4544 aaKnown RBP10.19□□□□□ -0.78
FAM49B-214ENST00000519540 IGLV7-46A0A075B6I9 117 aa10.16□□□□□ -0.78
FAM49B-214ENST00000519540 TNXBP22105 4242 aa10.16□□□□□ -0.78
FAM49B-214ENST00000519540 C9orf92A6NGG3 77 aa10.15□□□□□ -0.78
FAM49B-214ENST00000519540 IGKV2-30P06310 120 aa10.11□□□□□ -0.79
FAM49B-214ENST00000519540 MT1HL1P0DM35 61 aa10.1□□□□□ -0.79
FAM49B-214ENST00000519540 C20orf166-AS1Q96NR2 134 aa10.09□□□□□ -0.79
FAM49B-214ENST00000519540 SMIM26A0A096LP01 95 aa10.07□□□□□ -0.8
FAM49B-214ENST00000519540 A8MUU9 505 aa10.07□□□□□ -0.8
FAM49B-214ENST00000519540 FAT3Q8TDW7 4589 aa10.07□□□□□ -0.8
FAM49B-214ENST00000519540 FP248Q71RG6 208 aaPredicted RBP10.03□□□□□ -0.8
FAM49B-214ENST00000519540 DMBT1Q9UGM3 2413 aaPredicted RBP10.03□□□□□ -0.8
FAM49B-214ENST00000519540 IGKV2D-30A0A075B6S6 120 aa10.02□□□□□ -0.81
FAM49B-214ENST00000519540 HRES1P13985 223 aa10.02□□□□□ -0.81
FAM49B-214ENST00000519540 KRTAP4-5Q9BYR2 181 aa10□□□□□ -0.81
FAM49B-214ENST00000519540 MYCBP2O75592 4640 aa9.98□□□□□ -0.81
FAM49B-214ENST00000519540 Q75L30 129 aa9.95□□□□□ -0.82
FAM49B-214ENST00000519540 COA5Q86WW8 74 aa9.95□□□□□ -0.82
FAM49B-214ENST00000519540 C7orf65Q6ZTY9 151 aa9.94□□□□□ -0.82
FAM49B-214ENST00000519540 C4orf26Q17RF5 130 aa9.9□□□□□ -0.82
FAM49B-214ENST00000519540 MPLKIPQ8TAP9 179 aa9.9□□□□□ -0.82
FAM49B-214ENST00000519540 DMAC1Q96GE9 116 aa9.9□□□□□ -0.82
FAM49B-214ENST00000519540 ACYP2P14621 99 aa9.87□□□□□ -0.83
FAM49B-214ENST00000519540 Q1T7F1 81 aa9.83□□□□□ -0.84
FAM49B-214ENST00000519540 XP32Q5T750 250 aa9.83□□□□□ -0.84
FAM49B-214ENST00000519540 RPL37P61927 97 aaKnown RBP9.81□□□□□ -0.84
FAM49B-214ENST00000519540 SPINK7P58062 85 aa9.8□□□□□ -0.84
FAM49B-214ENST00000519540 ATP11AUNQ6ZP68 121 aa9.8□□□□□ -0.84
FAM49B-214ENST00000519540 V9GYY9 64 aa9.75□□□□□ -0.85
FAM49B-214ENST00000519540 TPRXLQ17RH7 258 aa9.72□□□□□ -0.85
FAM49B-214ENST00000519540 CHKB-CPT1BH3BT56 60 aa9.71□□□□□ -0.86
FAM49B-214ENST00000519540 A8MUN3 132 aa9.7□□□□□ -0.86
FAM49B-214ENST00000519540 BIRC6Q9NR09 4857 aa9.7□□□□□ -0.86
FAM49B-214ENST00000519540 ABCA13Q86UQ4 5058 aa9.69□□□□□ -0.86
FAM49B-214ENST00000519540 PSPHP1O15172 72 aa9.67□□□□□ -0.86
FAM49B-214ENST00000519540 J3QL48 77 aa9.65□□□□□ -0.86
FAM49B-214ENST00000519540 HERC2O95714 4834 aa9.65□□□□□ -0.86
FAM49B-214ENST00000519540 KRTAP3-1Q9BYR8 98 aa9.65□□□□□ -0.87
FAM49B-214ENST00000519540 LINC01558Q9Y6Z2 57 aa9.63□□□□□ -0.87
FAM49B-214ENST00000519540 PRR15LQ9BU68 103 aa9.6□□□□□ -0.87
FAM49B-214ENST00000519540 COX6B2Q6YFQ2 88 aa9.58□□□□□ -0.88
FAM49B-214ENST00000519540 Q5VV11 94 aa9.57□□□□□ -0.88
FAM49B-214ENST00000519540 LRP2P98164 4655 aa9.48□□□□□ -0.89
FAM49B-214ENST00000519540 LPAP08519 4548 aa9.48□□□□□ -0.89
FAM49B-214ENST00000519540 SPTSSBQ8NFR3 76 aa9.44□□□□□ -0.9
FAM49B-214ENST00000519540 BRK1Q8WUW1 75 aa9.44□□□□□ -0.9
FAM49B-214ENST00000519540 A0A1B0GU69 56 aa9.41□□□□□ -0.9
FAM49B-214ENST00000519540 SEC61BP60468 96 aaKnown RBP9.36□□□□□ -0.91
FAM49B-214ENST00000519540 A6NED7 52 aa9.34□□□□□ -0.91
FAM49B-214ENST00000519540 PRO0628Q9UI54 55 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 522.7 ms