RNA–Protein interactions for RNA: ENST00000519305.6

NPIPB3-204, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5

Gene NPIPB3, Length 848 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-204ENST00000519305 Q96NJ1 140 aa5.71□□□□□ -1.5
NPIPB3-204ENST00000519305 PKHD1L1Q86WI1 4243 aa5.7□□□□□ -1.5
NPIPB3-204ENST00000519305 IGKV3D-7A0A0C4DH55 119 aa5.7□□□□□ -1.5
NPIPB3-204ENST00000519305 NDUFB1O75438 58 aa5.7□□□□□ -1.5
NPIPB3-204ENST00000519305 HERC2O95714 4834 aa5.69□□□□□ -1.5
NPIPB3-204ENST00000519305 A8MWP4 228 aa5.67□□□□□ -1.5
NPIPB3-204ENST00000519305 DSCR10P59022 87 aa5.67□□□□□ -1.5
NPIPB3-204ENST00000519305 RETNLBQ9BQ08 111 aa5.66□□□□□ -1.5
NPIPB3-204ENST00000519305 MT-ATP8P03928 68 aa5.65□□□□□ -1.5
NPIPB3-204ENST00000519305 HIST1H4AP62805 103 aaKnown RBP5.65□□□□□ -1.5
NPIPB3-204ENST00000519305 FP248Q71RG6 208 aaPredicted RBP5.65□□□□□ -1.5
NPIPB3-204ENST00000519305 A0A1B0GVX0 72 aa5.64□□□□□ -1.51
NPIPB3-204ENST00000519305 K7EQZ3 153 aa5.64□□□□□ -1.51
NPIPB3-204ENST00000519305 PRR15Q8IV56 129 aa5.64□□□□□ -1.51
NPIPB3-204ENST00000519305 KRTAP9-9Q9BYP9 154 aa5.64□□□□□ -1.51
NPIPB3-204ENST00000519305 KRTAP9-4Q9BYQ2 154 aa5.64□□□□□ -1.51
NPIPB3-204ENST00000519305 IMUPQ9GZP8 106 aa5.64□□□□□ -1.51
NPIPB3-204ENST00000519305 IGHV6-1A0A0B4J1U7 121 aa5.63□□□□□ -1.51
NPIPB3-204ENST00000519305 Q8N9L7 120 aa5.63□□□□□ -1.51
NPIPB3-204ENST00000519305 DMBT1Q9UGM3 2413 aaPredicted RBP5.63□□□□□ -1.51
NPIPB3-204ENST00000519305 C8orf87E5RJ46 101 aa5.62□□□□□ -1.51
NPIPB3-204ENST00000519305 PRR4Q16378 134 aa5.62□□□□□ -1.51
NPIPB3-204ENST00000519305 IGLV7-46A0A075B6I9 117 aa5.61□□□□□ -1.51
NPIPB3-204ENST00000519305 LINC00313P59037 77 aa5.6□□□□□ -1.51
NPIPB3-204ENST00000519305 C8orf17Q9NRJ1 99 aa5.6□□□□□ -1.51
NPIPB3-204ENST00000519305 LRP1Q07954 4544 aaKnown RBP5.58□□□□□ -1.52
NPIPB3-204ENST00000519305 HCG22E2RYF7 251 aa5.58□□□□□ -1.52
NPIPB3-204ENST00000519305 ABCA13Q86UQ4 5058 aa5.58□□□□□ -1.52
NPIPB3-204ENST00000519305 FAT3Q8TDW7 4589 aa5.57□□□□□ -1.52
NPIPB3-204ENST00000519305 A0A087WVE0 104 aa5.57□□□□□ -1.52
NPIPB3-204ENST00000519305 MMP24-AS1A0A0U1RRL7 71 aa5.56□□□□□ -1.52
NPIPB3-204ENST00000519305 hDV103S1A0JD37 113 aa5.56□□□□□ -1.52
NPIPB3-204ENST00000519305 CASC2Q6XLA1 102 aa5.56□□□□□ -1.52
NPIPB3-204ENST00000519305 WFDC13Q8IUB5 93 aa5.56□□□□□ -1.52
NPIPB3-204ENST00000519305 C9orf92A6NGG3 77 aa5.55□□□□□ -1.52
NPIPB3-204ENST00000519305 NOTCH2NLQ7Z3S9 236 aa5.55□□□□□ -1.52
NPIPB3-204ENST00000519305 KRTAP4-8A0A0G2JLE6 195 aa5.54□□□□□ -1.52
NPIPB3-204ENST00000519305 TMEM254Q8TBM7 123 aa5.54□□□□□ -1.52
NPIPB3-204ENST00000519305 MRPL34Q9BQ48 92 aaKnown RBP5.53□□□□□ -1.52
NPIPB3-204ENST00000519305 MYCBP2O75592 4640 aa5.52□□□□□ -1.53
NPIPB3-204ENST00000519305 SCGB1A1P11684 91 aa5.52□□□□□ -1.53
NPIPB3-204ENST00000519305 TPRXLQ17RH7 258 aa5.52□□□□□ -1.53
NPIPB3-204ENST00000519305 KRTAP13-3Q3SY46 172 aa5.52□□□□□ -1.53
NPIPB3-204ENST00000519305 TNXBP22105 4242 aa5.52□□□□□ -1.53
NPIPB3-204ENST00000519305 FAM236AA0A1B0GUQ0 79 aa5.51□□□□□ -1.53
NPIPB3-204ENST00000519305 FAM236BA0A1B0GV22 79 aa5.51□□□□□ -1.53
NPIPB3-204ENST00000519305 KRTAP16-1A8MUX0 517 aa5.5□□□□□ -1.53
NPIPB3-204ENST00000519305 NDUFS5O43920 106 aa5.5□□□□□ -1.53
NPIPB3-204ENST00000519305 Q8N9P0 234 aaPredicted RBP5.48□□□□□ -1.53
NPIPB3-204ENST00000519305 C20orf166-AS1Q96NR2 134 aa5.47□□□□□ -1.53
NPIPB3-204ENST00000519305 ATOX1O00244 68 aa5.46□□□□□ -1.54
NPIPB3-204ENST00000519305 SMIM20Q8N5G0 67 aa5.46□□□□□ -1.54
NPIPB3-204ENST00000519305 TP53AIP1Q9HCN2 124 aa5.46□□□□□ -1.54
NPIPB3-204ENST00000519305 PCLOQ9Y6V0 5065 aa5.45□□□□□ -1.54
NPIPB3-204ENST00000519305 A8MUU9 505 aa5.45□□□□□ -1.54
NPIPB3-204ENST00000519305 Q75L30 129 aa5.45□□□□□ -1.54
NPIPB3-204ENST00000519305 UQCRQO14949 82 aa5.43□□□□□ -1.54
NPIPB3-204ENST00000519305 RPL37P61927 97 aaKnown RBP5.42□□□□□ -1.54
NPIPB3-204ENST00000519305 TRAV7A0A075B6U4 112 aa5.41□□□□□ -1.54
NPIPB3-204ENST00000519305 ATP11AUNQ6ZP68 121 aa5.41□□□□□ -1.54
NPIPB3-204ENST00000519305 OCR1Q9BZK8 76 aa5.41□□□□□ -1.54
NPIPB3-204ENST00000519305 ZCCHC13Q8WW36 166 aaKnown RBP5.4□□□□□ -1.54
NPIPB3-204ENST00000519305 LCE1DQ5T752 114 aa5.39□□□□□ -1.55
NPIPB3-204ENST00000519305 TRAV22A0A0B4J277 110 aa5.38□□□□□ -1.55
NPIPB3-204ENST00000519305 C5orf47Q569G3 176 aa5.38□□□□□ -1.55
NPIPB3-204ENST00000519305 SERP2Q8N6R1 65 aa5.38□□□□□ -1.55
NPIPB3-204ENST00000519305 ANAPC13Q9BS18 74 aa5.38□□□□□ -1.55
NPIPB3-204ENST00000519305 MP68P56378 58 aa5.37□□□□□ -1.55
NPIPB3-204ENST00000519305 SEC61BP60468 96 aaKnown RBP5.37□□□□□ -1.55
NPIPB3-204ENST00000519305 H0Y9P7 68 aa5.36□□□□□ -1.55
NPIPB3-204ENST00000519305 Q5W150 140 aa5.36□□□□□ -1.55
NPIPB3-204ENST00000519305 H3BPC8 53 aa5.34□□□□□ -1.55
NPIPB3-204ENST00000519305 COX7CP15954 63 aa5.34□□□□□ -1.55
NPIPB3-204ENST00000519305 PCOTHQ58A44 107 aa5.34□□□□□ -1.55
NPIPB3-204ENST00000519305 KRTAP4-7Q9BYR0 210 aa5.34□□□□□ -1.55
NPIPB3-204ENST00000519305 LOC101927531A0A1B0GV80 90 aa5.31□□□□□ -1.56
NPIPB3-204ENST00000519305 LINC00208Q96KT6 92 aa5.31□□□□□ -1.56
NPIPB3-204ENST00000519305 C1orf64Q8NEQ6 169 aa5.3□□□□□ -1.56
NPIPB3-204ENST00000519305 IGKV2D-30A0A075B6S6 120 aa5.29□□□□□ -1.56
NPIPB3-204ENST00000519305 IGKV2-30P06310 120 aa5.29□□□□□ -1.56
NPIPB3-204ENST00000519305 LCE4AQ5TA78 99 aa5.29□□□□□ -1.56
NPIPB3-204ENST00000519305 C7orf65Q6ZTY9 151 aa5.29□□□□□ -1.56
NPIPB3-204ENST00000519305 C20orf197Q8N268 126 aa5.28□□□□□ -1.56
NPIPB3-204ENST00000519305 A0A0U1RQV1 116 aa5.27□□□□□ -1.57
NPIPB3-204ENST00000519305 SPINK7P58062 85 aa5.27□□□□□ -1.57
NPIPB3-204ENST00000519305 CYP4F30PQ9H0H9 118 aa5.25□□□□□ -1.57
NPIPB3-204ENST00000519305 SNURFQ9Y675 71 aa5.25□□□□□ -1.57
NPIPB3-204ENST00000519305 KLKP1Q107X0 134 aa5.24□□□□□ -1.57
NPIPB3-204ENST00000519305 KRTAP4-9Q9BYQ8 210 aa5.24□□□□□ -1.57
NPIPB3-204ENST00000519305 H3BS24 57 aa5.23□□□□□ -1.57
NPIPB3-204ENST00000519305 PCP4P48539 62 aa5.23□□□□□ -1.57
NPIPB3-204ENST00000519305 CCDC179H3BU77 68 aa5.22□□□□□ -1.57
NPIPB3-204ENST00000519305 KRTAP19-4Q3LI73 84 aa5.21□□□□□ -1.58
NPIPB3-204ENST00000519305 HERC1Q15751 4861 aa5.2□□□□□ -1.58
NPIPB3-204ENST00000519305 NDUFC1O43677 76 aa5.2□□□□□ -1.58
NPIPB3-204ENST00000519305 LPAP08519 4548 aa5.18□□□□□ -1.58
NPIPB3-204ENST00000519305 KRTAP9-7A8MTY7 169 aa5.18□□□□□ -1.58
NPIPB3-204ENST00000519305 HMCN2Q8NDA2 5059 aa5.18□□□□□ -1.58
NPIPB3-204ENST00000519305 HRES1P13985 223 aa5.17□□□□□ -1.58
NPIPB3-204ENST00000519305 KRTAP4-1Q9BYQ7 146 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms